RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 CBWD1Q9BRT8 395 aa12.37□□□□□ -0.43
CLDN4-202ENST00000431918 EDIL3O43854 480 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 VCAM1P19320 739 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 CIITAP33076 1130 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 CCDC50Q8IVM0 306 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 CSADQ9Y600 493 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 GOLGB1Q14789 3259 aaKnown RBP12.36□□□□□ -0.43
CLDN4-202ENST00000431918 EP400Q96L91 3159 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 ASTN2O75129 1339 aaPredicted RBP12.36□□□□□ -0.43
CLDN4-202ENST00000431918 ITGB5P18084 799 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 ZNF720Q7Z2F6 126 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 CCDC26Q8TAB7 109 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 HDAC7Q8WUI4 952 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 LPAR1Q92633 364 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 DDX47Q9H0S4 455 aaKnown RBP12.36□□□□□ -0.43
CLDN4-202ENST00000431918 VAV3Q9UKW4 847 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 NOP56O00567 594 aaKnown RBP12.36□□□□□ -0.43
CLDN4-202ENST00000431918 PSMD10O75832 226 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 NR3C2P08235 984 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 MARK3P27448 753 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 PSMC5P62195 406 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 FAM71BQ8TC56 605 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 SYTL5Q8TDW5 730 aaPredicted RBP12.36□□□□□ -0.43
CLDN4-202ENST00000431918 SLC35C1Q96A29 364 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 RIT2Q99578 217 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 USTQ9Y2C2 406 aa12.36□□□□□ -0.43
CLDN4-202ENST00000431918 ZRANB2O95218 330 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLDN4-202ENST00000431918 EGFRP00533 1210 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 SOX5P35711 763 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 GGCXP38435 758 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 NOVP48745 357 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 GALCP54803 685 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 CDK17Q00537 523 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 BFSP1Q12934 665 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 POTEAQ6S8J7 498 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 BTNL9Q6UXG8 535 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 INTS8Q75QN2 995 aaKnown RBP12.35□□□□□ -0.43
CLDN4-202ENST00000431918 LENG9Q96B70 501 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 IMPG2Q9BZV3 1241 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 DKC1O60832 514 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLDN4-202ENST00000431918 FAM83AQ86UY5 434 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 UHMK1Q8TAS1 419 aaKnown RBP12.35□□□□□ -0.43
CLDN4-202ENST00000431918 FAM213AQ9BRX8 229 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 RANBP17Q9H2T7 1088 aaKnown RBP12.35□□□□□ -0.43
CLDN4-202ENST00000431918 NAGPAQ9UK23 515 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 ODF2LQ9ULJ1 636 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 TRAF3IP3Q9Y228 551 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 GINS2Q9Y248 185 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 H3BQF6 201 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 PGRMC1O00264 195 aaKnown RBP12.35□□□□□ -0.43
CLDN4-202ENST00000431918 COL5A3P25940 1745 aaPredicted RBP12.35□□□□□ -0.43
CLDN4-202ENST00000431918 CDR1P51861 262 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 HYIQ5T013 277 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 SEL1L2Q5TEA6 688 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 MSANTD4Q8NCY6 345 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 NT5C1BQ96P26 610 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 HSD17B14Q9BPX1 270 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 GGA3Q9NZ52 723 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 HSPBP1Q9NZL4 362 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 USP20Q9Y2K6 914 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 LRRIQ3A6PVS8 624 aaPredicted RBP12.35□□□□□ -0.43
CLDN4-202ENST00000431918 AMPD2Q01433 879 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 KRT76Q01546 638 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 NAB2Q15742 525 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 C1orf186Q6ZWK4 172 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 ZNF280CQ8ND82 737 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 NSUN6Q8TEA1 469 aaKnown RBP12.35□□□□□ -0.43
CLDN4-202ENST00000431918 KIFAP3Q92845 792 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 SLC5A5Q92911 643 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 PSMD1Q99460 953 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 L1RE1Q9UN81 338 aa12.35□□□□□ -0.43
CLDN4-202ENST00000431918 UTP11Q9Y3A2 253 aaKnown RBP12.35□□□□□ -0.43
CLDN4-202ENST00000431918 ASTN1O14525 1302 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 SLC16A3O15427 465 aaKnown RBP12.34□□□□□ -0.43
CLDN4-202ENST00000431918 TLR2O60603 784 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 NPM3O75607 178 aaKnown RBP12.34□□□□□ -0.43
CLDN4-202ENST00000431918 FGGP02679 453 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 SSTR3P32745 418 aaPredicted RBP12.34□□□□□ -0.43
CLDN4-202ENST00000431918 MNAT1P51948 309 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 ZCWPW2Q504Y3 356 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 CEP85LQ5SZL2 805 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 FMNL3Q8IVF7 1028 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 NEK9Q8TD19 979 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 PCDHA10Q9Y5I2 948 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 CYP3A4P08684 503 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 SF3A3Q12874 501 aaKnown RBP eCLIP12.34□□□□□ -0.43
CLDN4-202ENST00000431918 SULF1Q8IWU6 871 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 UBL4BQ8N7F7 174 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 ZNF653Q96CK0 615 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 MED4Q9NPJ6 270 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 C1orf112Q9NSG2 853 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 SALL4Q9UJQ4 1053 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 GSTTP1A0A1W2PQM5 241 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 OPLAHO14841 1288 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 PDE6CP51160 858 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 JAK3P52333 1124 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 EPHB4P54760 987 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 CCNI2Q6ZMN8 369 aaPredicted RBP12.34□□□□□ -0.43
CLDN4-202ENST00000431918 RPUSD2Q8IZ73 545 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms