RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 ZNF276Q8N554 614 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 PHC3Q8NDX5 983 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 FAM163AQ96GL9 167 aaPredicted RBP5.56□□□□□ -1.52
RIF1-203ENST00000428287 BLZF1Q9H2G9 400 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 DDX43Q9NXZ2 648 aaKnown RBP5.56□□□□□ -1.52
RIF1-203ENST00000428287 CIDEBQ9UHD4 219 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 DDAH1O94760 285 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 TAC1P20366 129 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 GFPT1Q06210 699 aaPredicted RBP5.56□□□□□ -1.52
RIF1-203ENST00000428287 NKX1-1Q15270 411 aaPredicted RBP5.56□□□□□ -1.52
RIF1-203ENST00000428287 HYIQ5T013 277 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 FAM91A1Q658Y4 838 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 DENND2CQ68D51 928 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 ADGRG6Q86SQ4 1221 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 CNBD1Q8NA66 436 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 RIOK1Q9BRS2 568 aaKnown RBP5.56□□□□□ -1.52
RIF1-203ENST00000428287 DENND2DQ9H6A0 471 aaPredicted RBP5.56□□□□□ -1.52
RIF1-203ENST00000428287 FGFR1OP2Q9NVK5 253 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 DIS3Q9Y2L1 958 aaKnown RBP5.56□□□□□ -1.52
RIF1-203ENST00000428287 SMARCA1P28370 1054 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 TUBP50607 506 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 SLC45A4Q5BKX6 768 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 NFXL1Q6ZNB6 911 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 DENND1AQ8TEH3 1009 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 FBF1Q8TES7 1133 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 NUP133Q8WUM0 1156 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 ARHGEF2Q92974 986 aaKnown RBP5.56□□□□□ -1.52
RIF1-203ENST00000428287 RMDN2Q96LZ7 410 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 BLOC1S4Q9NUP1 217 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 GALNT8Q9NY28 637 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 CYP39A1Q9NYL5 469 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 LGALS13Q9UHV8 139 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 STARD13Q9Y3M8 1113 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 DAAM1Q9Y4D1 1078 aa5.56□□□□□ -1.52
RIF1-203ENST00000428287 V9GY48 417 aaPredicted RBP5.56□□□□□ -1.52
RIF1-203ENST00000428287 RALGAPA1Q6GYQ0 2036 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 BTAF1O14981 1849 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 ESYT2A0FGR8 921 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 RGS16O15492 202 aaPredicted RBP5.55□□□□□ -1.52
RIF1-203ENST00000428287 KCNA6P17658 529 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 PHKA1P46020 1223 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 TXNRD1Q16881 649 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 CCDC152Q4G0S7 254 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 ANKS1BQ7Z6G8 1248 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 ECHDC2Q86YB7 292 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 ALG3Q92685 438 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 RBM17Q96I25 401 aaKnown RBP5.55□□□□□ -1.52
RIF1-203ENST00000428287 SETDB2Q96T68 719 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 NACAP1Q9BZK3 213 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 NSRP1Q9H0G5 558 aaKnown RBP5.55□□□□□ -1.52
RIF1-203ENST00000428287 TRPM6Q9BX84 2022 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 PFASO15067 1338 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 NCK2O43639 380 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 GIGYF2Q6Y7W6 1299 aaKnown RBP5.55□□□□□ -1.52
RIF1-203ENST00000428287 LDHAL6AQ6ZMR3 332 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 PPP4R3CPQ6ZMV5 832 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 TAOK1Q7L7X3 1001 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 IFNL2Q8IZJ0 200 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 ZNF333Q96JL9 665 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 LRRC37BQ96QE4 947 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 SENP3Q9H4L4 574 aaPredicted RBP5.55□□□□□ -1.52
RIF1-203ENST00000428287 KCNK3O14649 394 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 GNA14O95837 355 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 PHEXP78562 749 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 AMPD3Q01432 767 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 FOXB2Q5VYV0 432 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 TRMT10CQ7L0Y3 403 aaKnown RBP5.55□□□□□ -1.52
RIF1-203ENST00000428287 PRELID2Q8N945 189 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 GLG1Q92896 1179 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 RPS6KC1Q96S38 1066 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 ARHGEF10LQ9HCE6 1279 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 POLIQ9UNA4 740 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 ATP8A1Q9Y2Q0 1164 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 UTP11Q9Y3A2 253 aaKnown RBP5.55□□□□□ -1.52
RIF1-203ENST00000428287 ROBO1Q9Y6N7 1651 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 ZNF174Q15697 407 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 HLFQ16534 295 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 CATIPQ7Z7H3 387 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 ALDH16A1Q8IZ83 802 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 CCDC82Q8N4S0 544 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 KIFAP3Q92845 792 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 STMN4Q9H169 189 aaPredicted RBP5.55□□□□□ -1.52
RIF1-203ENST00000428287 TXLNGQ9NUQ3 528 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 NKX1-2Q9UD57 310 aaPredicted RBP5.55□□□□□ -1.52
RIF1-203ENST00000428287 NCOR1O75376 2440 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 C2CD2LO14523 706 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 CYTH3O43739 400 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 EDIL3O43854 480 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 CSDE1O75534 798 aaKnown RBP5.55□□□□□ -1.52
RIF1-203ENST00000428287 IVDP26440 423 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 ATP11AP98196 1134 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 CEP128Q6ZU80 1094 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 DGKHQ86XP1 1220 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 CCNJLQ8IV13 435 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 ZDHHC14Q8IZN3 488 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 SMC1BQ8NDV3 1235 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 YIPF3Q9GZM5 350 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 MMRN2Q9H8L6 949 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 ETNK1Q9HBU6 452 aa5.55□□□□□ -1.52
RIF1-203ENST00000428287 TCP11L1Q9NUJ3 509 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms