RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 BANK1Q8NDB2 785 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 CNNM3Q8NE01 707 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 TMEM40Q8WWA1 233 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 CEP170P1Q96L14 293 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 PRIMPOLQ96LW4 560 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 YME1L1Q96TA2 773 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 MTRQ99707 1265 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 NT5C3AQ9H0P0 336 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 TMEM60Q9H2L4 133 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 TMX1Q9H3N1 280 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 ST3GAL5Q9UNP4 418 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 AKT3Q9Y243 479 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 NOC2LQ9Y3T9 749 aaKnown RBP10.19□□□□□ -0.78
SMC1A-203ENST00000428014 COL4A3BPQ9Y5P4 624 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 H3BNC9 293 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 INPPL1O15357 1258 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 LINC00271P0C7V0 271 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 ZSCAN20P17040 1043 aaPredicted RBP10.18□□□□□ -0.78
SMC1A-203ENST00000428014 MCM7P33993 719 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 CLCN3P51790 818 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 UBE3AQ05086 875 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 PTGDRQ13258 359 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 TFDP1Q14186 410 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 COL19A1Q14993 1142 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 PTPROQ16827 1216 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 FAM187BQ17R55 369 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 KIZQ2M2Z5 673 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 MTERF2Q49AM1 385 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 NCAPH2Q6IBW4 605 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 RTN4RL1Q86UN2 441 aaPredicted RBP10.18□□□□□ -0.78
SMC1A-203ENST00000428014 FERMT3Q86UX7 667 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 CATSPER3Q86XQ3 398 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 LINC01599Q8WXQ3 324 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 DYDC2Q96IM9 177 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 OSMRQ99650 979 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 C11orf84Q9BUA3 381 aaPredicted RBP10.18□□□□□ -0.78
SMC1A-203ENST00000428014 ZSCAN16Q9H4T2 348 aaPredicted RBP10.18□□□□□ -0.78
SMC1A-203ENST00000428014 SUGCTQ9HAC7 445 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 ATP6V0A4Q9HBG4 840 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 IFT122Q9HBG6 1241 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 WDR70Q9NW82 654 aa10.18□□□□□ -0.78
SMC1A-203ENST00000428014 SUCLA2Q9P2R7 463 aaPredicted RBP10.18□□□□□ -0.78
SMC1A-203ENST00000428014 WRAP73Q9P2S5 460 aaPredicted RBP10.18□□□□□ -0.78
SMC1A-203ENST00000428014 PRRC2BQ5JSZ5 2229 aaKnown RBP10.18□□□□□ -0.78
SMC1A-203ENST00000428014 ARID2Q68CP9 1835 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 DENND3A2RUS2 1198 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 WNT7AO00755 349 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 LPXNO60711 386 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 VTNP04004 478 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 ABCD1P33897 745 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 ARL2P36404 184 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 BMPR1AP36894 532 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 PHKA2P46019 1235 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 RABGGTBP53611 331 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 PTENP60484 403 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 GUCY1B3Q02153 619 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 NCBP1Q09161 790 aaKnown RBP10.17□□□□□ -0.78
SMC1A-203ENST00000428014 EMC2Q15006 297 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 PPP2R5AQ15172 486 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 XKR9Q5GH70 373 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 PDE12Q6L8Q7 609 aaKnown RBP10.17□□□□□ -0.78
SMC1A-203ENST00000428014 TMEM92Q6UXU6 159 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 DTHD1Q6ZMT9 781 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 ZNF598Q86UK7 904 aaKnown RBP10.17□□□□□ -0.78
SMC1A-203ENST00000428014 TPH2Q8IWU9 490 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 FIBCD1Q8N539 461 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 MAFAQ8NHW3 353 aaPredicted RBP10.17□□□□□ -0.78
SMC1A-203ENST00000428014 TMC2Q8TDI7 906 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 GJA10Q969M2 543 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 MRPL9Q9BYD2 267 aaKnown RBP10.17□□□□□ -0.78
SMC1A-203ENST00000428014 OSBPL7Q9BZF2 842 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 TMEM117Q9H0C3 514 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 UBN1Q9NPG3 1134 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 XPNPEP1Q9NQW7 623 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 AAASQ9NRG9 546 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 AGPAT5Q9NUQ2 364 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 RGL1Q9NZL6 768 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 LRWD1Q9UFC0 647 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 COG5Q9UP83 839 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 LZTS1Q9Y250 596 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 CUL9Q8IWT3 2517 aa10.17□□□□□ -0.78
SMC1A-203ENST00000428014 TTC28Q96AY4 2481 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 CNTNAP2Q9UHC6 1331 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 POTEMA6NI47 508 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 CYP11B2P19099 503 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 TECP42680 631 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 LAMTOR4Q0VGL1 99 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 NFX1Q12986 1120 aaKnown RBP10.16□□□□□ -0.78
SMC1A-203ENST00000428014 ZNF174Q15697 407 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 TIGD5Q53EQ6 642 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 KRT79Q5XKE5 535 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 CDCA2Q69YH5 1023 aaPredicted RBP10.16□□□□□ -0.78
SMC1A-203ENST00000428014 ATL3Q6DD88 541 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 MRPL10Q7Z7H8 261 aaKnown RBP10.16□□□□□ -0.78
SMC1A-203ENST00000428014 TMEM192Q8IY95 271 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 LRRC71Q8N4P6 559 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 ATXN2LQ8WWM7 1075 aaKnown RBP10.16□□□□□ -0.78
SMC1A-203ENST00000428014 PRPF31Q8WWY3 499 aaKnown RBP10.16□□□□□ -0.78
SMC1A-203ENST00000428014 NLRP7Q8WX94 980 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 MYLIPQ8WY64 445 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms