RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 ZNF668Q96K58 619 aaPredicted RBP13.28□□□□□ -0.28
RFC4-206ENST00000427785 CNOT6LQ96LI5 555 aaKnown RBP13.28□□□□□ -0.28
RFC4-206ENST00000427785 PPP1R16BQ96T49 567 aa13.28□□□□□ -0.28
RFC4-206ENST00000427785 STRA6Q9BX79 667 aa13.28□□□□□ -0.28
RFC4-206ENST00000427785 THAP9Q9H5L6 903 aa13.28□□□□□ -0.28
RFC4-206ENST00000427785 C17orf75Q9HAS0 396 aa13.28□□□□□ -0.28
RFC4-206ENST00000427785 SPC25Q9HBM1 224 aa13.28□□□□□ -0.28
RFC4-206ENST00000427785 TYW1Q9NV66 732 aaKnown RBP13.28□□□□□ -0.28
RFC4-206ENST00000427785 SETD4Q9NVD3 440 aa13.28□□□□□ -0.28
RFC4-206ENST00000427785 TAB2Q9NYJ8 693 aa13.28□□□□□ -0.28
RFC4-206ENST00000427785 DDX20Q9UHI6 824 aaKnown RBP13.28□□□□□ -0.28
RFC4-206ENST00000427785 TISP43B9A030 160 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 HAS3O00219 553 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 GAS2O43903 313 aaKnown RBP13.27□□□□□ -0.29
RFC4-206ENST00000427785 SERPINC1P01008 464 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 CDK11BP21127 795 aaKnown RBP13.27□□□□□ -0.29
RFC4-206ENST00000427785 KLRC1P26715 233 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 NAMPTP43490 491 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 SMTNP53814 917 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 PPP2R5AQ15172 486 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 KRT31Q15323 416 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 GNASQ5JWF2 1037 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 EFCAB12Q6NXP0 572 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 MTHFD1LQ6UB35 978 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 CXCL17Q6UXB2 119 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 TAS1R3Q7RTX0 852 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 IRF2BP1Q8IU81 584 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 CREBRFQ8IUR6 639 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 SYCP3Q8IZU3 236 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 DEPTORQ8TB45 409 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 NOC3LQ8WTT2 800 aaKnown RBP13.27□□□□□ -0.29
RFC4-206ENST00000427785 TCP11Q8WWU5 503 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 PSPC1Q8WXF1 523 aaKnown RBP13.27□□□□□ -0.29
RFC4-206ENST00000427785 ACCSQ96QU6 501 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 JPH2Q9BR39 696 aaPredicted RBP13.27□□□□□ -0.29
RFC4-206ENST00000427785 KATNAL1Q9BW62 490 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 XPO4Q9C0E2 1151 aaKnown RBP13.27□□□□□ -0.29
RFC4-206ENST00000427785 ST6GALNAC4Q9H4F1 302 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 ARHGAP28Q9P2N2 729 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 SUCLA2Q9P2R7 463 aaPredicted RBP13.27□□□□□ -0.29
RFC4-206ENST00000427785 PCDHB13Q9Y5F0 798 aa13.27□□□□□ -0.29
RFC4-206ENST00000427785 CITO14578 2027 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 CLIC2O15247 247 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 TGFB1I1O43294 461 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 CALUO43852 315 aaPredicted RBP13.26□□□□□ -0.29
RFC4-206ENST00000427785 NR3C1P04150 777 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 NR2F2P24468 414 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 GTF2BQ00403 316 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 CCDC173Q0VFZ6 552 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 LAMTOR4Q0VGL1 99 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 HIC1Q14526 733 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 PTPN21Q16825 1174 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 RALGAPA2Q2PPJ7 1873 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 TCP11X2Q5H9J9 407 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 IER5Q5VY09 327 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 PHLPP2Q6ZVD8 1323 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 RHPN2Q8IUC4 686 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 MAP4K3Q8IVH8 894 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 ZC3H3Q8IXZ2 948 aaKnown RBP13.26□□□□□ -0.29
RFC4-206ENST00000427785 LINC01465Q8N7H1 131 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 RETREG2Q8NC44 543 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 SLC17A8Q8NDX2 589 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 PRPF31Q8WWY3 499 aaKnown RBP13.26□□□□□ -0.29
RFC4-206ENST00000427785 HVCN1Q96D96 273 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 NLRP4Q96MN2 994 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 MTG1Q9BT17 334 aaPredicted RBP13.26□□□□□ -0.29
RFC4-206ENST00000427785 AGPAT3Q9NRZ7 376 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 INTS13Q9NVM9 706 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 MAGEC2Q9UBF1 373 aaPredicted RBP13.26□□□□□ -0.29
RFC4-206ENST00000427785 TBX20Q9UMR3 447 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 TRAF3IP3Q9Y228 551 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 AKT3Q9Y243 479 aa13.26□□□□□ -0.29
RFC4-206ENST00000427785 TRIP11Q15643 1979 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 PDXKO00764 312 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 MAGEB2O15479 319 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 ZEB2O60315 1214 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 MYCP01106 439 aaPredicted RBP13.25□□□□□ -0.29
RFC4-206ENST00000427785 VTNP04004 478 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 CST5P28325 142 aaPredicted RBP13.25□□□□□ -0.29
RFC4-206ENST00000427785 CYP2J2P51589 502 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 COPB1P53618 953 aaKnown RBP13.25□□□□□ -0.29
RFC4-206ENST00000427785 UBASH3AP57075 661 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 SPAG1Q07617 926 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 EDRF1Q3B7T1 1238 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 MARCH8Q5T0T0 291 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 FOXR2Q6PJQ5 311 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 RUFY4Q6ZNE9 571 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 HS2ST1Q7LGA3 356 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 APTXQ7Z2E3 356 aaKnown RBP13.25□□□□□ -0.29
RFC4-206ENST00000427785 FAM114A1Q8IWE2 563 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 EXOC8Q8IYI6 725 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 DNAJC5GQ8N7S2 189 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 RNF149Q8NC42 400 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 PDLIM2Q96JY6 352 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 NAP1L5Q96NT1 182 aaPredicted RBP13.25□□□□□ -0.29
RFC4-206ENST00000427785 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.25□□□□□ -0.29
RFC4-206ENST00000427785 FAM49AQ9H0Q0 323 aaPredicted RBP13.25□□□□□ -0.29
RFC4-206ENST00000427785 GBP3Q9H0R5 595 aa13.25□□□□□ -0.29
RFC4-206ENST00000427785 LIMA1Q9UHB6 759 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms