RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 GABPAQ06546 454 aa11.5□□□□□ -0.57
TCOF1-204ENST00000427724 ZNF658Q5TYW1 1059 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-204ENST00000427724 CDR2LQ86X02 465 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-204ENST00000427724 CNOT6LQ96LI5 555 aaKnown RBP11.5□□□□□ -0.57
TCOF1-204ENST00000427724 AGXT2Q9BYV1 514 aa11.5□□□□□ -0.57
TCOF1-204ENST00000427724 C2orf40Q9H1Z8 148 aa11.5□□□□□ -0.57
TCOF1-204ENST00000427724 KIF9Q9HAQ2 790 aa11.5□□□□□ -0.57
TCOF1-204ENST00000427724 MED4Q9NPJ6 270 aa11.5□□□□□ -0.57
TCOF1-204ENST00000427724 MYO1AQ9UBC5 1043 aa11.5□□□□□ -0.57
TCOF1-204ENST00000427724 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-204ENST00000427724 SALL1Q9NSC2 1324 aa11.5□□□□□ -0.57
TCOF1-204ENST00000427724 RRN3P2A6NIE6 340 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 GPR25O00155 361 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 BUB1O43683 1085 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 KLHL30Q0D2K2 578 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 MAP2K5Q13163 448 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 ZNF394Q53GI3 561 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 SLFN12LQ6IEE8 588 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 MMS22LQ6ZRQ5 1243 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 TMC7Q7Z402 723 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 GPR142Q7Z601 462 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 RYBPQ8N488 228 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-204ENST00000427724 TC2NQ8N9U0 490 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 ZNF579Q8NAF0 562 aaKnown RBP11.49□□□□□ -0.57
TCOF1-204ENST00000427724 PGBD4Q96DM1 585 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 EIF2AK1Q9BQI3 630 aaKnown RBP11.49□□□□□ -0.57
TCOF1-204ENST00000427724 FHOD1Q9Y613 1164 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 COL14A1Q05707 1796 aaKnown RBP11.49□□□□□ -0.57
TCOF1-204ENST00000427724 FARP2O94887 1054 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-204ENST00000427724 MRPS25P82663 173 aaKnown RBP11.49□□□□□ -0.57
TCOF1-204ENST00000427724 TSPY1Q01534 308 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 FSTL1Q12841 308 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 NCAPHQ15003 741 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 EPHA7Q15375 998 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 TADA2BQ86TJ2 420 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 YAF2Q8IY57 180 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 FAM186BQ8IYM0 893 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 EMILIN3Q9NT22 766 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 PCDHB4Q9Y5E5 795 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 MRFAP1Q9Y605 127 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 ZNF286BP0CG31 522 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 ZBTB48P10074 688 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-204ENST00000427724 RHBDL3P58872 404 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 FSCN1Q16658 493 aaKnown RBP11.49□□□□□ -0.57
TCOF1-204ENST00000427724 LY6KQ17RY6 165 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 TCP11X2Q5H9J9 407 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 PLA2G4FQ68DD2 849 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 RNF139Q8WU17 664 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 NCAPGQ9BPX3 1015 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 MRIQ9BWK5 157 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 TSPYL2Q9H2G4 693 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-204ENST00000427724 AAASQ9NRG9 546 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 SETD4Q9NVD3 440 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 RWDD2AQ9UIY3 292 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 PP2D1A8MPX8 630 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 SRGAP2O75044 1071 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 XPAP23025 273 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-204ENST00000427724 YWHABP31946 246 aaKnown RBP11.49□□□□□ -0.57
TCOF1-204ENST00000427724 NPEPPSP55786 919 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 SOX10P56693 466 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 PRKCEQ02156 737 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 PTPAQ15257 358 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 KIZQ2M2Z5 673 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 KLHL7Q8IXQ5 586 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 BEST2Q8NFU1 509 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 MXRA8Q9BRK3 442 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 STK17AQ9UEE5 414 aa11.49□□□□□ -0.57
TCOF1-204ENST00000427724 MAP1BP46821 2468 aaKnown RBP11.48□□□□□ -0.57
TCOF1-204ENST00000427724 TRAPPC3O43617 180 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 ATXN8OSP0DMR3 200 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 PPP2R5DQ14738 602 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 ASIC2Q16515 512 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 CPLX4Q7Z7G2 160 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 FMNL3Q8IVF7 1028 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 NT5C1BQ96P26 610 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 CAPS2Q9BXY5 557 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 CTTNBP2NLQ9P2B4 639 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 SDK1Q7Z5N4 2213 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 CXCR5P32302 372 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 VEPH1Q14D04 833 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 CEP85LQ5SZL2 805 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 TREML2Q5T2D2 321 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 C15orf52Q6ZUT6 534 aaKnown RBP11.48□□□□□ -0.57
TCOF1-204ENST00000427724 SLC51AQ86UW1 340 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 KIF12Q96FN5 646 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 MTG1Q9BT17 334 aaPredicted RBP11.48□□□□□ -0.57
TCOF1-204ENST00000427724 L2HGDHQ9H9P8 463 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 ABHD10Q9NUJ1 306 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 PRRG1O14668 218 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 MAFGO15525 162 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 PPFIA4O75335 1185 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 C1QTNF8P60827 252 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 CRHR2Q13324 411 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 CATSPERGQ6ZRH7 1159 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 REXO1L1PQ8IX06 675 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 FAM213AQ9BRX8 229 aa11.48□□□□□ -0.57
TCOF1-204ENST00000427724 METTL14Q9HCE5 456 aaKnown RBP11.48□□□□□ -0.57
TCOF1-204ENST00000427724 A1CFQ9NQ94 594 aaKnown RBP11.48□□□□□ -0.57
TCOF1-204ENST00000427724 GOLGA6L10A0A0M3HER8 536 aa11.47□□□□□ -0.57
TCOF1-204ENST00000427724 PEX10O60683 326 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms