RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 ZFYVE19Q96K21 471 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 KIFC3Q9BVG8 833 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 NFKBIZQ9BYH8 718 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 SEL1LQ9UBV2 794 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 PCDHGB4Q9UN71 923 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 GTPBP10A4D1E9 387 aaKnown RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 LRRIQ3A6PVS8 624 aaPredicted RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 E7EWF7 191 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 CLDN3O15551 220 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 C6orf222P0C671 652 aaPredicted RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 PSMA2P25787 234 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 PLIN5Q00G26 463 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 ZNF699Q32M78 642 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 HABP4Q5JVS0 413 aaKnown RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 PCGF5Q86SE9 256 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 TAGAPQ8N103 731 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 KLHDC4Q8TBB5 520 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 SMARCAD1Q9H4L7 1026 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 ASNSD1Q9NWL6 643 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 VTI1BQ9UEU0 232 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 PRXQ9BXM0 1461 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 SASH1O94885 1247 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 CYP2B6P20813 491 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 GTF2A2P52657 109 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 HIRAP54198 1017 aaPredicted RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 MESDQ14696 234 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 KRT72Q14CN4 511 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 FAM83BQ5T0W9 1011 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 SHQ1Q6PI26 577 aaKnown RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 PPP1R14AQ96A00 147 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 ZNF496Q96IT1 587 aaPredicted RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 RMDN3Q96TC7 470 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 ASPSCR1Q9BZE9 553 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 ALDH8A1Q9H2A2 487 aaPredicted RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 PARVGQ9HBI0 331 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 NCOA5Q9HCD5 579 aaKnown RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 KLHL14Q9P2G3 628 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 CARMIL3Q8ND23 1372 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 PALLDQ8WX93 1383 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 GOLGA8MH3BSY2 632 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 ERVK-10P10266 1014 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 NAT2P11245 290 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 EEF1GP26641 437 aaKnown RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 AKT1P31749 480 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 RGS2P41220 211 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 ALDH7A1P49419 539 aaKnown RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 BASP1P80723 227 aaKnown RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 OCRLQ01968 901 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 GRAMD1BQ3KR37 738 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 TMTC3Q6ZXV5 915 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 BRINP3Q76B58 766 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 TBC1D32Q96NH3 1257 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 GAS2L1Q99501 681 aaPredicted RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 SEPT5Q99719 369 aaPredicted RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 COLEC11Q9BWP8 271 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 CARD6Q9BX69 1037 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 MRPL4Q9BYD3 311 aaKnown RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 HOMER3Q9NSC5 361 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 PCDHB12Q9Y5F1 795 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 TSPOAP1O95153 1857 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 PNMA6FA0A0J9YX94 578 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 ZNF202O95125 648 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 RPN1P04843 607 aaKnown RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 RAP1GDS1P52306 607 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 SNX1Q13596 522 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 RNF168Q8IYW5 571 aaPredicted RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 MCPH1Q8NEM0 835 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 BTN2A2Q8WVV5 523 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 PHF21AQ96BD5 680 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 AHCYL2Q96HN2 611 aaKnown RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 SMAD5Q99717 465 aaKnown RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 ARHGAP26Q9UNA1 814 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 TRIM35Q9UPQ4 493 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 ATP11BQ9Y2G3 1177 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 CCL15-CCL14A0A0B4J2E2 113 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 TRIM64A6NGJ6 449 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 TRIM64BA6NI03 449 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 NDUFS2O75306 463 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 GH1P01241 217 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 DDIT3P35638 169 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 NCALDP61601 193 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 FANCCQ00597 558 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 CCL15Q16663 113 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 DCP1BQ8IZD4 617 aaKnown RBP6.1□□□□□ -1.43
HERC4-206ENST00000427635 FANCBQ8NB91 859 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 TRIM58Q8NG06 486 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 PPWD1Q96BP3 646 aaKnown RBP6.1□□□□□ -1.43
HERC4-206ENST00000427635 ZBTB9Q96C00 473 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 RMDN1Q96DB5 314 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 CCDC51Q96ER9 411 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 ERO1AQ96HE7 468 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 AK8Q96MA6 479 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 PIF1Q9H611 641 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 ZWILCHQ9H900 591 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 SLC39A2Q9NP94 309 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 PIN4Q9Y237 131 aaKnown RBP6.1□□□□□ -1.43
HERC4-206ENST00000427635 KDM4FA0A1W2PPD8 638 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 GOLGA8JA6NMD2 632 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 POC1B-GALNT4F8VUJ3 575 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 RPS6KA5O75582 802 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms