RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 OSBPP22059 807 aa23.76■■□□□ 1.39
CNEP1R1-202ENST00000427478 MTERF2Q49AM1 385 aa23.76■■□□□ 1.39
CNEP1R1-202ENST00000427478 CBWD6Q4V339 395 aa23.76■■□□□ 1.39
CNEP1R1-202ENST00000427478 CBWD3Q5JTY5 395 aa23.76■■□□□ 1.39
CNEP1R1-202ENST00000427478 CBWD5Q5RIA9 395 aa23.76■■□□□ 1.39
CNEP1R1-202ENST00000427478 FASTKD5Q7L8L6 764 aaKnown RBP23.76■■□□□ 1.39
CNEP1R1-202ENST00000427478 SLC17A8Q8NDX2 589 aa23.76■■□□□ 1.39
CNEP1R1-202ENST00000427478 TMEM161BQ8NDZ6 487 aa23.76■■□□□ 1.39
CNEP1R1-202ENST00000427478 KMT5AQ9NQR1 393 aa23.76■■□□□ 1.39
CNEP1R1-202ENST00000427478 DGAT1O75907 488 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 GJA5P36382 358 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 KLHL30Q0D2K2 578 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 Q3C1V9 767 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 GPAT2Q6NUI2 795 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 GJB7Q6PEY0 223 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 MTERF4Q7Z6M4 381 aaKnown RBP23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 C12orf56Q8IXR9 622 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 UBXN4Q92575 508 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 ZNF302Q9NR11 478 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 CGNQ9P2M7 1197 aaKnown RBP23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 IQCA1LA6NCM1 817 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 EFCAB8A8MWE9 144 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 PGK2P07205 417 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 MAGEA1P43355 309 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 XKR3Q5GH77 459 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 EEPD1Q7L9B9 569 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 ATP6V0A4Q9HBG4 840 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 XPNPEP1Q9NQW7 623 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 HSPBP1Q9NZL4 362 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 TBX20Q9UMR3 447 aa23.75■■□□□ 1.39
CNEP1R1-202ENST00000427478 DENND3A2RUS2 1198 aa23.74■■□□□ 1.39
CNEP1R1-202ENST00000427478 ATG7O95352 703 aa23.74■■□□□ 1.39
CNEP1R1-202ENST00000427478 KRT13P13646 458 aa23.74■■□□□ 1.39
CNEP1R1-202ENST00000427478 XXYLT1Q8NBI6 393 aa23.74■■□□□ 1.39
CNEP1R1-202ENST00000427478 ZSWIM2Q8NEG5 633 aa23.74■■□□□ 1.39
CNEP1R1-202ENST00000427478 MCPH1Q8NEM0 835 aa23.74■■□□□ 1.39
CNEP1R1-202ENST00000427478 SECISBP2LQ93073 1101 aaKnown RBP23.74■■□□□ 1.39
CNEP1R1-202ENST00000427478 ZNF408Q9H9D4 720 aa23.74■■□□□ 1.39
CNEP1R1-202ENST00000427478 ZC3H4Q9UPT8 1303 aaKnown RBP23.74■■□□□ 1.39
CNEP1R1-202ENST00000427478 ENC1O14682 589 aa23.74■■□□□ 1.39
CNEP1R1-202ENST00000427478 MYL7Q01449 175 aa23.74■■□□□ 1.39
CNEP1R1-202ENST00000427478 MAP7D2Q96T17 732 aa23.74■■□□□ 1.39
CNEP1R1-202ENST00000427478 PDLIM7Q9NR12 457 aa23.74■■□□□ 1.39
CNEP1R1-202ENST00000427478 FBXL5Q9UKA1 691 aa23.74■■□□□ 1.39
CNEP1R1-202ENST00000427478 EXOC7Q9UPT5 735 aa23.74■■□□□ 1.39
CNEP1R1-202ENST00000427478 CLEC11AQ9Y240 323 aa23.74■■□□□ 1.39
CNEP1R1-202ENST00000427478 RBAK-RBAKDNI3L0D1 243 aa23.73■■□□□ 1.39
CNEP1R1-202ENST00000427478 ATP4AP20648 1035 aa23.73■■□□□ 1.39
CNEP1R1-202ENST00000427478 LDLRAD1Q5T700 205 aa23.73■■□□□ 1.39
CNEP1R1-202ENST00000427478 IQCEQ6IPM2 695 aa23.73■■□□□ 1.39
CNEP1R1-202ENST00000427478 TMEM174Q8WUU8 243 aa23.73■■□□□ 1.39
CNEP1R1-202ENST00000427478 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.73■■□□□ 1.39
CNEP1R1-202ENST00000427478 C17orf75Q9HAS0 396 aa23.73■■□□□ 1.39
CNEP1R1-202ENST00000427478 MAFBQ9Y5Q3 323 aaPredicted RBP23.73■■□□□ 1.39
CNEP1R1-202ENST00000427478 FARP2O94887 1054 aaPredicted RBP23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 TFRCP02786 760 aaKnown RBP23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 OATP04181 439 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 DLG4P78352 724 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 TUBB2AQ13885 445 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 WDR78Q5VTH9 848 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 INTS8Q75QN2 995 aaKnown RBP23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 MAP4K3Q8IVH8 894 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 SPIRE2Q8WWL2 714 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 HVCN1Q96D96 273 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 TUBB2BQ9BVA1 445 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 POLR3FQ9H1D9 316 aaPredicted RBP23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 MLXIPQ9HAP2 919 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 ADGRA3Q8IWK6 1321 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 ZNFX1Q9P2E3 1918 aaKnown RBP23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 ANKRD63C9JTQ0 380 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 ATP1A1P05023 1023 aaKnown RBP23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 POTEJP0CG39 1038 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 JAM2P57087 298 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 SNRPFP62306 86 aaKnown RBP23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 AMPD2Q01433 879 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 SNAPC2Q13487 334 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 IRF2BP2Q7Z5L9 587 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 MMP19Q99542 508 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 PUF60Q9UHX1 559 aaKnown RBP23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 MYO6Q9UM54 1294 aa23.72■■□□□ 1.39
CNEP1R1-202ENST00000427478 MCM3APO60318 1980 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 COPB2P35606 906 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 VAMP7P51809 220 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 POLGP54098 1239 aaPredicted RBP23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 PNMA8AQ86V59 439 aaPredicted RBP23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 SLC10A4Q96EP9 437 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 FGD4Q96M96 766 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 NTPCRQ9BSD7 190 aaKnown RBP23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 INTS2Q9H0H0 1204 aaKnown RBP23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 HDAC6Q9UBN7 1215 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 EMSYQ7Z589 1322 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 A0A087X0T9 212 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 GSTTP1A0A1W2PQM5 241 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 GOLGA8IPA6NC78 632 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 GOLGA8JA6NMD2 632 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 FAM228BP0C875 321 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 HSP90AA2PQ14568 343 aaPredicted RBP23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 KCTD2Q14681 263 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 EMC2Q15006 297 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 SLC18A3Q16572 532 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms