RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 CTSAP10619 480 aa16.56■□□□□ 0.24
PDAP1-202ENST00000426447 POLGP54098 1239 aaPredicted RBP16.56■□□□□ 0.24
PDAP1-202ENST00000426447 RNASELQ05823 741 aaKnown RBP16.56■□□□□ 0.24
PDAP1-202ENST00000426447 ANGPT1Q15389 498 aa16.56■□□□□ 0.24
PDAP1-202ENST00000426447 LONRF3Q496Y0 759 aa16.56■□□□□ 0.24
PDAP1-202ENST00000426447 PRR16Q569H4 304 aa16.56■□□□□ 0.24
PDAP1-202ENST00000426447 CCDC149Q6ZUS6 474 aa16.56■□□□□ 0.24
PDAP1-202ENST00000426447 DDX53Q86TM3 631 aaKnown RBP16.56■□□□□ 0.24
PDAP1-202ENST00000426447 SLC22A17Q8WUG5 538 aa16.56■□□□□ 0.24
PDAP1-202ENST00000426447 IGSF21Q96ID5 467 aa16.56■□□□□ 0.24
PDAP1-202ENST00000426447 RTP3Q9BQQ7 232 aa16.56■□□□□ 0.24
PDAP1-202ENST00000426447 GCOM2Q9BZD3 368 aaPredicted RBP16.56■□□□□ 0.24
PDAP1-202ENST00000426447 LSG1Q9H089 658 aaKnown RBP16.56■□□□□ 0.24
PDAP1-202ENST00000426447 CHST12Q9NRB3 414 aa16.56■□□□□ 0.24
PDAP1-202ENST00000426447 IRAK3Q9Y616 596 aa16.56■□□□□ 0.24
PDAP1-202ENST00000426447 WDR64B1ANS9 1081 aa16.55■□□□□ 0.24
PDAP1-202ENST00000426447 CSDE1O75534 798 aaKnown RBP16.55■□□□□ 0.24
PDAP1-202ENST00000426447 OATP04181 439 aa16.55■□□□□ 0.24
PDAP1-202ENST00000426447 RFX1P22670 979 aa16.55■□□□□ 0.24
PDAP1-202ENST00000426447 KLRC2P26717 231 aa16.55■□□□□ 0.24
PDAP1-202ENST00000426447 TBC1D8BQ0IIM8 1120 aa16.55■□□□□ 0.24
PDAP1-202ENST00000426447 CWF19L1Q69YN2 538 aaKnown RBP16.55■□□□□ 0.24
PDAP1-202ENST00000426447 TWF2Q6IBS0 349 aaKnown RBP16.55■□□□□ 0.24
PDAP1-202ENST00000426447 GLB1LQ6UWU2 654 aa16.55■□□□□ 0.24
PDAP1-202ENST00000426447 GPR149Q86SP6 731 aa16.55■□□□□ 0.24
PDAP1-202ENST00000426447 CCDC105Q8IYK2 499 aa16.55■□□□□ 0.24
PDAP1-202ENST00000426447 SIX5Q8N196 739 aa16.55■□□□□ 0.24
PDAP1-202ENST00000426447 LINC01465Q8N7H1 131 aa16.55■□□□□ 0.24
PDAP1-202ENST00000426447 DTWD2Q8NBA8 298 aa16.55■□□□□ 0.24
PDAP1-202ENST00000426447 EMILIN2Q9BXX0 1053 aa16.55■□□□□ 0.24
PDAP1-202ENST00000426447 GBP3Q9H0R5 595 aa16.55■□□□□ 0.24
PDAP1-202ENST00000426447 SFXN1Q9H9B4 322 aa16.55■□□□□ 0.24
PDAP1-202ENST00000426447 C6orf50Q9HD87 102 aa16.55■□□□□ 0.24
PDAP1-202ENST00000426447 NAP1L2Q9ULW6 460 aaPredicted RBP16.55■□□□□ 0.24
PDAP1-202ENST00000426447 INPP5FQ9Y2H2 1132 aa16.55■□□□□ 0.24
PDAP1-202ENST00000426447 EVPLQ92817 2033 aa16.54■□□□□ 0.24
PDAP1-202ENST00000426447 GOLGA8AA7E2F4 631 aa16.54■□□□□ 0.24
PDAP1-202ENST00000426447 GOLGA8BA8MQT2 603 aa16.54■□□□□ 0.24
PDAP1-202ENST00000426447 GALTP07902 379 aa16.54■□□□□ 0.24
PDAP1-202ENST00000426447 SKIP12755 728 aa16.54■□□□□ 0.24
PDAP1-202ENST00000426447 NPR3P17342 541 aa16.54■□□□□ 0.24
PDAP1-202ENST00000426447 PHKA2P46019 1235 aa16.54■□□□□ 0.24
PDAP1-202ENST00000426447 CDC42EP1Q00587 391 aa16.54■□□□□ 0.24
PDAP1-202ENST00000426447 FUT2Q10981 343 aa16.54■□□□□ 0.24
PDAP1-202ENST00000426447 NECTIN1Q15223 517 aa16.54■□□□□ 0.24
PDAP1-202ENST00000426447 TMEM173Q86WV6 379 aaPredicted RBP16.54■□□□□ 0.24
PDAP1-202ENST00000426447 RSPH1Q8WYR4 309 aa16.54■□□□□ 0.24
PDAP1-202ENST00000426447 LPPQ93052 612 aa16.54■□□□□ 0.24
PDAP1-202ENST00000426447 KCNK12Q9HB15 430 aa16.54■□□□□ 0.24
PDAP1-202ENST00000426447 DISC1Q9NRI5 854 aa16.54■□□□□ 0.24
PDAP1-202ENST00000426447 BRPF3Q9ULD4 1205 aa16.54■□□□□ 0.24
PDAP1-202ENST00000426447 MYO10Q9HD67 2058 aa16.54■□□□□ 0.24
PDAP1-202ENST00000426447 MYO15AQ9UKN7 3530 aa16.53■□□□□ 0.24
PDAP1-202ENST00000426447 SSBP05455 408 aaKnown RBP eCLIP16.53■□□□□ 0.24
PDAP1-202ENST00000426447 DNM2P50570 870 aa16.53■□□□□ 0.24
PDAP1-202ENST00000426447 PRKCEQ02156 737 aa16.53■□□□□ 0.24
PDAP1-202ENST00000426447 NOMO2Q5JPE7 1267 aa16.53■□□□□ 0.24
PDAP1-202ENST00000426447 RNF20Q5VTR2 975 aa16.53■□□□□ 0.24
PDAP1-202ENST00000426447 REXO1Q8N1G1 1221 aaKnown RBP16.53■□□□□ 0.24
PDAP1-202ENST00000426447 CRYGNQ8WXF5 182 aa16.53■□□□□ 0.24
PDAP1-202ENST00000426447 NRDE2Q9H7Z3 1164 aa16.53■□□□□ 0.24
PDAP1-202ENST00000426447 ANO2Q9NQ90 1003 aa16.53■□□□□ 0.24
PDAP1-202ENST00000426447 TBC1D13Q9NVG8 400 aa16.53■□□□□ 0.24
PDAP1-202ENST00000426447 DUSP12Q9UNI6 340 aa16.53■□□□□ 0.24
PDAP1-202ENST00000426447 CHMP2AO43633 222 aa16.52■□□□□ 0.24
PDAP1-202ENST00000426447 ZNF862O60290 1169 aa16.52■□□□□ 0.24
PDAP1-202ENST00000426447 SFPQP23246 707 aaKnown RBP eCLIP16.52■□□□□ 0.24
PDAP1-202ENST00000426447 PFKFB3Q16875 520 aaPredicted RBP16.52■□□□□ 0.24
PDAP1-202ENST00000426447 LETM2Q2VYF4 491 aa16.52■□□□□ 0.24
PDAP1-202ENST00000426447 CCDC12Q8WUD4 166 aaPredicted RBP16.52■□□□□ 0.24
PDAP1-202ENST00000426447 TCEANC2Q96MN5 208 aa16.52■□□□□ 0.24
PDAP1-202ENST00000426447 KLHL5Q96PQ7 755 aa16.52■□□□□ 0.24
PDAP1-202ENST00000426447 INO80BQ9C086 356 aaPredicted RBP16.52■□□□□ 0.24
PDAP1-202ENST00000426447 IGSF9Q9P2J2 1179 aa16.52■□□□□ 0.24
PDAP1-202ENST00000426447 PIN4Q9Y237 131 aaKnown RBP16.52■□□□□ 0.24
PDAP1-202ENST00000426447 A0A087WZ62 844 aa16.51■□□□□ 0.23
PDAP1-202ENST00000426447 KLF18A0A0U1RQI7 1052 aa16.51■□□□□ 0.23
PDAP1-202ENST00000426447 LMNAP02545 664 aaKnown RBP16.51■□□□□ 0.23
PDAP1-202ENST00000426447 CFHP08603 1231 aa16.51■□□□□ 0.23
PDAP1-202ENST00000426447 GNA11P29992 359 aa16.51■□□□□ 0.23
PDAP1-202ENST00000426447 CDC27P30260 824 aa16.51■□□□□ 0.23
PDAP1-202ENST00000426447 GBP2P32456 591 aaPredicted RBP16.51■□□□□ 0.23
PDAP1-202ENST00000426447 FGD1P98174 961 aa16.51■□□□□ 0.23
PDAP1-202ENST00000426447 NONOQ15233 471 aaKnown RBP eCLIP16.51■□□□□ 0.23
PDAP1-202ENST00000426447 PTPN14Q15678 1187 aa16.51■□□□□ 0.23
PDAP1-202ENST00000426447 FEZF2Q8TBJ5 459 aa16.51■□□□□ 0.23
PDAP1-202ENST00000426447 BCL7CQ8WUZ0 217 aaPredicted RBP16.51■□□□□ 0.23
PDAP1-202ENST00000426447 PGBD4Q96DM1 585 aa16.51■□□□□ 0.23
PDAP1-202ENST00000426447 FAM193BQ96PV7 902 aaPredicted RBP16.51■□□□□ 0.23
PDAP1-202ENST00000426447 FDXACB1Q9BRP7 624 aaPredicted RBP16.51■□□□□ 0.23
PDAP1-202ENST00000426447 ESYT1Q9BSJ8 1104 aa16.51■□□□□ 0.23
PDAP1-202ENST00000426447 ZMYND12Q9H0C1 365 aa16.51■□□□□ 0.23
PDAP1-202ENST00000426447 SEMA4AQ9H3S1 761 aa16.51■□□□□ 0.23
PDAP1-202ENST00000426447 FAM105AQ9NUU6 356 aa16.51■□□□□ 0.23
PDAP1-202ENST00000426447 DNAJB4Q9UDY4 337 aa16.51■□□□□ 0.23
PDAP1-202ENST00000426447 STK39Q9UEW8 545 aa16.51■□□□□ 0.23
PDAP1-202ENST00000426447 GAS7O60861 476 aa16.5■□□□□ 0.23
PDAP1-202ENST00000426447 OFD1O75665 1012 aa16.5■□□□□ 0.23
PDAP1-202ENST00000426447 ALDH2P05091 517 aa16.5■□□□□ 0.23
PDAP1-202ENST00000426447 CNPP09543 421 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms