RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 TRADDQ15628 312 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 MAP9Q49MG5 647 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 H2AFVQ71UI9 128 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 VPS36Q86VN1 386 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 LNX1Q8TBB1 728 aaPredicted RBP12.59□□□□□ -0.39
UBR4-207ENST00000425413 KAT5Q92993 513 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 AP1M1Q9BXS5 423 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 OSGEPQ9NPF4 335 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 ACP6Q9NPH0 428 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 PXMP2Q9NR77 195 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 PICK1Q9NRD5 415 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 TAS2R14Q9NYV8 317 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 RPTORQ8N122 1335 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 HNRNPH2P55795 449 aaKnown RBP12.58□□□□□ -0.4
UBR4-207ENST00000425413 JAM2P57087 298 aa12.58□□□□□ -0.4
UBR4-207ENST00000425413 PPP3CAQ08209 521 aa12.58□□□□□ -0.4
UBR4-207ENST00000425413 RPS6KA1Q15418 735 aa12.58□□□□□ -0.4
UBR4-207ENST00000425413 MEI1Q5TIA1 1274 aa12.58□□□□□ -0.4
UBR4-207ENST00000425413 PHLDB3Q6NSJ2 640 aa12.58□□□□□ -0.4
UBR4-207ENST00000425413 ZNF746Q6NUN9 644 aaPredicted RBP12.58□□□□□ -0.4
UBR4-207ENST00000425413 ARHGAP27Q6ZUM4 889 aa12.58□□□□□ -0.4
UBR4-207ENST00000425413 MMGT1Q8N4V1 131 aa12.58□□□□□ -0.4
UBR4-207ENST00000425413 POP1Q99575 1024 aaKnown RBP12.58□□□□□ -0.4
UBR4-207ENST00000425413 UBE2TQ9NPD8 197 aaPredicted RBP12.58□□□□□ -0.4
UBR4-207ENST00000425413 DMAC2Q9NW81 257 aa12.58□□□□□ -0.4
UBR4-207ENST00000425413 TARSL2A2RTX5 802 aaKnown RBP12.58□□□□□ -0.4
UBR4-207ENST00000425413 FOXN3O00409 490 aaPredicted RBP12.58□□□□□ -0.4
UBR4-207ENST00000425413 GLI1P08151 1106 aa12.58□□□□□ -0.4
UBR4-207ENST00000425413 SOX5P35711 763 aa12.58□□□□□ -0.4
UBR4-207ENST00000425413 GALCP54803 685 aa12.58□□□□□ -0.4
UBR4-207ENST00000425413 GUCY2DQ02846 1103 aa12.58□□□□□ -0.4
UBR4-207ENST00000425413 DAAM2Q86T65 1068 aa12.58□□□□□ -0.4
UBR4-207ENST00000425413 HPCAL4Q9UM19 191 aa12.58□□□□□ -0.4
UBR4-207ENST00000425413 PCDHGC5Q9Y5F6 944 aa12.58□□□□□ -0.4
UBR4-207ENST00000425413 TUBBP07437 444 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 BCRP11274 1271 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 PRLRP16471 622 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 GGCXP38435 758 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 ZNF280AP59817 542 aaPredicted RBP12.57□□□□□ -0.4
UBR4-207ENST00000425413 SKIDA1Q1XH10 827 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 TAF3Q5VWG9 929 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 ADAT2Q7Z6V5 191 aaKnown RBP12.57□□□□□ -0.4
UBR4-207ENST00000425413 ARHGEF19Q8IW93 802 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 SLC20A1Q8WUM9 679 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 HSPBP1Q9NZL4 362 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 BZW2Q9Y6E2 419 aaKnown RBP12.57□□□□□ -0.4
UBR4-207ENST00000425413 NR3C2P08235 984 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 PLS3P13797 630 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 MCM3P25205 808 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 GUCY2FP51841 1108 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 BACE1P56817 501 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 CBWD2Q8IUF1 395 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 TRPM4Q8TD43 1214 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 PLEKHO2Q8TD55 490 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 ACCSQ96QU6 501 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 EPB41L5Q9HCM4 733 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 STIM2Q9P246 746 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 GABBR1Q9UBS5 961 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 APEX2Q9UBZ4 518 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 ZNF541Q9H0D2 1346 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 IGSF9BQ9UPX0 1349 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 ANKRD63C9JTQ0 380 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 PPP1R37O75864 691 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 FERP16591 822 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 CARSP49589 748 aaKnown RBP12.57□□□□□ -0.4
UBR4-207ENST00000425413 VAMP7P51809 220 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 TGFB2P61812 414 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 MAP2K1Q02750 393 aaPredicted RBP12.57□□□□□ -0.4
UBR4-207ENST00000425413 NAA35Q5VZE5 725 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 PEX26Q7Z412 305 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 NLRX1Q86UT6 975 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 SLC16A10Q8TF71 515 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 TOPORSQ9NS56 1045 aaPredicted RBP12.57□□□□□ -0.4
UBR4-207ENST00000425413 TBC1D22BQ9NU19 505 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 KCND2Q9NZV8 630 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 NFU1Q9UMS0 254 aa12.57□□□□□ -0.4
UBR4-207ENST00000425413 WDR64B1ANS9 1081 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 RNF40O75150 1001 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 HEXIM1O94992 359 aaKnown RBP12.56□□□□□ -0.4
UBR4-207ENST00000425413 PTPRAP18433 802 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 PRKCIP41743 596 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 PPARDQ03181 441 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 PRPF4BQ13523 1007 aaKnown RBP12.56□□□□□ -0.4
UBR4-207ENST00000425413 R3HDM1Q15032 1099 aaKnown RBP12.56□□□□□ -0.4
UBR4-207ENST00000425413 SWSAP1Q6NVH7 229 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 ANO5Q75V66 913 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 ZNF280CQ8ND82 737 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 TPCN2Q8NHX9 752 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 CEP170P1Q96L14 293 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 MKNK1Q9BUB5 465 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 STK33Q9BYT3 514 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 CALCOCO1Q9P1Z2 691 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 KIF4AO95239 1232 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 ADRB2P07550 413 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 TNFAIP3P21580 790 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 PSMC5P62195 406 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 NEK9Q8TD19 979 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 ARHGEF26Q96DR7 871 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 GPR88Q9GZN0 384 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 VPS33BQ9H267 617 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms