RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 RABL3Q5HYI8 236 aa7.3□□□□□ -1.24
LINC01040-201ENST00000425048 DPY19L2P1Q6NXN4 242 aa7.3□□□□□ -1.24
LINC01040-201ENST00000425048 MRGPREQ86SM8 312 aa7.3□□□□□ -1.24
LINC01040-201ENST00000425048 THAP3Q8WTV1 239 aaPredicted RBP7.3□□□□□ -1.24
LINC01040-201ENST00000425048 SLC25A43Q8WUT9 341 aaPredicted RBP7.3□□□□□ -1.24
LINC01040-201ENST00000425048 ARMC5Q96C12 935 aa7.3□□□□□ -1.24
LINC01040-201ENST00000425048 DYDC2Q96IM9 177 aa7.3□□□□□ -1.24
LINC01040-201ENST00000425048 SRPK1Q96SB4 655 aaKnown RBP7.3□□□□□ -1.24
LINC01040-201ENST00000425048 MNTQ99583 582 aa7.3□□□□□ -1.24
LINC01040-201ENST00000425048 M0R2C6 588 aa7.29□□□□□ -1.24
LINC01040-201ENST00000425048 DVL2O14641 736 aa7.29□□□□□ -1.24
LINC01040-201ENST00000425048 FAM20BO75063 409 aa7.29□□□□□ -1.24
LINC01040-201ENST00000425048 TOX4O94842 621 aa7.29□□□□□ -1.24
LINC01040-201ENST00000425048 RABGGTBP53611 331 aa7.29□□□□□ -1.24
LINC01040-201ENST00000425048 BMP8AQ7Z5Y6 402 aa7.29□□□□□ -1.24
LINC01040-201ENST00000425048 NME9Q86XW9 330 aa7.29□□□□□ -1.24
LINC01040-201ENST00000425048 ELOA2Q8IYF1 753 aaPredicted RBP7.29□□□□□ -1.24
LINC01040-201ENST00000425048 ATXN2LQ8WWM7 1075 aaKnown RBP7.29□□□□□ -1.24
LINC01040-201ENST00000425048 RPGRQ92834 1020 aaKnown RBP7.29□□□□□ -1.24
LINC01040-201ENST00000425048 ARL8AQ96BM9 186 aa7.29□□□□□ -1.24
LINC01040-201ENST00000425048 TUBGCP5Q96RT8 1024 aa7.29□□□□□ -1.24
LINC01040-201ENST00000425048 PCIF1Q9H4Z3 704 aa7.29□□□□□ -1.24
LINC01040-201ENST00000425048 SYNPO2Q9UMS6 1093 aa7.29□□□□□ -1.24
LINC01040-201ENST00000425048 KLRG2A4D1S0 409 aaPredicted RBP7.28□□□□□ -1.24
LINC01040-201ENST00000425048 E9PSI1 815 aa7.28□□□□□ -1.24
LINC01040-201ENST00000425048 GCP02774 474 aa7.28□□□□□ -1.24
LINC01040-201ENST00000425048 BCAR1P56945 870 aa7.28□□□□□ -1.24
LINC01040-201ENST00000425048 MKL1Q969V6 931 aa7.28□□□□□ -1.24
LINC01040-201ENST00000425048 ZNF512Q96ME7 567 aaPredicted RBP7.28□□□□□ -1.24
LINC01040-201ENST00000425048 NCOA5Q9HCD5 579 aaKnown RBP7.28□□□□□ -1.24
LINC01040-201ENST00000425048 POLR3BQ9NW08 1133 aaPredicted RBP7.28□□□□□ -1.24
LINC01040-201ENST00000425048 SAMD15Q9P1V8 674 aa7.28□□□□□ -1.24
LINC01040-201ENST00000425048 TRPS1Q9UHF7 1281 aa7.28□□□□□ -1.24
LINC01040-201ENST00000425048 MAFGO15525 162 aa7.27□□□□□ -1.25
LINC01040-201ENST00000425048 IPO13O94829 963 aaKnown RBP7.27□□□□□ -1.25
LINC01040-201ENST00000425048 RHOBTB3O94955 611 aa7.27□□□□□ -1.25
LINC01040-201ENST00000425048 BMP5P22003 454 aa7.27□□□□□ -1.25
LINC01040-201ENST00000425048 COL10A1Q03692 680 aa7.27□□□□□ -1.25
LINC01040-201ENST00000425048 ZNF174Q15697 407 aa7.27□□□□□ -1.25
LINC01040-201ENST00000425048 PRAMEF9Q5VWM5 478 aa7.27□□□□□ -1.25
LINC01040-201ENST00000425048 ZCCHC8Q6NZY4 707 aaKnown RBP7.27□□□□□ -1.25
LINC01040-201ENST00000425048 HTR3DQ70Z44 454 aa7.27□□□□□ -1.25
LINC01040-201ENST00000425048 CMTM4Q8IZR5 234 aa7.27□□□□□ -1.25
LINC01040-201ENST00000425048 SYNE4Q8N205 404 aa7.27□□□□□ -1.25
LINC01040-201ENST00000425048 ZNF276Q8N554 614 aa7.27□□□□□ -1.25
LINC01040-201ENST00000425048 CHST14Q8NCH0 376 aa7.27□□□□□ -1.25
LINC01040-201ENST00000425048 MDGA1Q8NFP4 955 aa7.27□□□□□ -1.25
LINC01040-201ENST00000425048 LENG9Q96B70 501 aa7.27□□□□□ -1.25
LINC01040-201ENST00000425048 C16orf92Q96LL3 132 aa7.27□□□□□ -1.25
LINC01040-201ENST00000425048 NCDNQ9UBB6 729 aa7.27□□□□□ -1.25
LINC01040-201ENST00000425048 DNAI1Q9UI46 699 aa7.27□□□□□ -1.25
LINC01040-201ENST00000425048 PLD2O14939 933 aa7.26□□□□□ -1.25
LINC01040-201ENST00000425048 KIR2DL3P43628 341 aa7.26□□□□□ -1.25
LINC01040-201ENST00000425048 NPEPPSP55786 919 aa7.26□□□□□ -1.25
LINC01040-201ENST00000425048 SOGA3Q5TF21 947 aa7.26□□□□□ -1.25
LINC01040-201ENST00000425048 PGBD4Q96DM1 585 aa7.26□□□□□ -1.25
LINC01040-201ENST00000425048 C14orf93Q9H972 538 aaKnown RBP7.26□□□□□ -1.25
LINC01040-201ENST00000425048 CABP5Q9NP86 173 aa7.26□□□□□ -1.25
LINC01040-201ENST00000425048 PTPDC1A2A3K4 754 aa7.25□□□□□ -1.25
LINC01040-201ENST00000425048 H7C1D1 291 aa7.25□□□□□ -1.25
LINC01040-201ENST00000425048 GLRX3O76003 335 aaKnown RBP7.25□□□□□ -1.25
LINC01040-201ENST00000425048 IGFALSP35858 605 aa7.25□□□□□ -1.25
LINC01040-201ENST00000425048 ADCY1Q08828 1119 aa7.25□□□□□ -1.25
LINC01040-201ENST00000425048 EPHA7Q15375 998 aa7.25□□□□□ -1.25
LINC01040-201ENST00000425048 MBNL2Q5VZF2 373 aaKnown RBP7.25□□□□□ -1.25
LINC01040-201ENST00000425048 MB21D1Q8N884 522 aa7.25□□□□□ -1.25
LINC01040-201ENST00000425048 HAPLN2Q9GZV7 340 aa7.25□□□□□ -1.25
LINC01040-201ENST00000425048 FZD1Q9UP38 647 aa7.25□□□□□ -1.25
LINC01040-201ENST00000425048 HNRNPLP14866 589 aaKnown RBP eCLIP7.24□□□□□ -1.25
LINC01040-201ENST00000425048 RANGAP1P46060 587 aaPredicted RBP7.24□□□□□ -1.25
LINC01040-201ENST00000425048 SPIDRQ14159 915 aa7.24□□□□□ -1.25
LINC01040-201ENST00000425048 PTPAQ15257 358 aa7.24□□□□□ -1.25
LINC01040-201ENST00000425048 MAN2A1Q16706 1144 aa7.24□□□□□ -1.25
LINC01040-201ENST00000425048 C2orf27AQ580R0 203 aa7.24□□□□□ -1.25
LINC01040-201ENST00000425048 C1QL3Q5VWW1 255 aa7.24□□□□□ -1.25
LINC01040-201ENST00000425048 RHOUQ7L0Q8 258 aa7.24□□□□□ -1.25
LINC01040-201ENST00000425048 KIAA1958Q8N8K9 716 aa7.24□□□□□ -1.25
LINC01040-201ENST00000425048 ST8SIA2Q92186 375 aa7.24□□□□□ -1.25
LINC01040-201ENST00000425048 PTCH2Q9Y6C5 1203 aa7.24□□□□□ -1.25
LINC01040-201ENST00000425048 PPFIA4O75335 1185 aa7.23□□□□□ -1.25
LINC01040-201ENST00000425048 RAPGEF3O95398 923 aa7.23□□□□□ -1.25
LINC01040-201ENST00000425048 ASLP04424 464 aa7.23□□□□□ -1.25
LINC01040-201ENST00000425048 GNAT2P19087 354 aa7.23□□□□□ -1.25
LINC01040-201ENST00000425048 LY6G5CQ5SRR4 150 aa7.23□□□□□ -1.25
LINC01040-201ENST00000425048 NAIF1Q69YI7 327 aaPredicted RBP7.23□□□□□ -1.25
LINC01040-201ENST00000425048 TIGD7Q6NT04 549 aaPredicted RBP7.23□□□□□ -1.25
LINC01040-201ENST00000425048 OSBPL6Q9BZF3 934 aa7.23□□□□□ -1.25
LINC01040-201ENST00000425048 A0A0A6YYJ9 748 aa7.22□□□□□ -1.25
LINC01040-201ENST00000425048 ITGB1P05556 798 aa7.22□□□□□ -1.25
LINC01040-201ENST00000425048 PTX3P26022 381 aaPredicted RBP7.22□□□□□ -1.25
LINC01040-201ENST00000425048 ADRA1BP35368 520 aa7.22□□□□□ -1.25
LINC01040-201ENST00000425048 ADCY2Q08462 1091 aa7.22□□□□□ -1.25
LINC01040-201ENST00000425048 MYBPC3Q14896 1274 aa7.22□□□□□ -1.25
LINC01040-201ENST00000425048 FNDC3BQ53EP0 1204 aaKnown RBP7.22□□□□□ -1.25
LINC01040-201ENST00000425048 APBB1IPQ7Z5R6 666 aaPredicted RBP7.22□□□□□ -1.25
LINC01040-201ENST00000425048 VRK3Q8IV63 474 aa7.22□□□□□ -1.25
LINC01040-201ENST00000425048 GPR150Q8NGU9 434 aa7.22□□□□□ -1.25
LINC01040-201ENST00000425048 PROKR1Q8TCW9 393 aa7.22□□□□□ -1.25
LINC01040-201ENST00000425048 PACSIN3Q9UKS6 424 aa7.22□□□□□ -1.25
LINC01040-201ENST00000425048 GRXCR1A8MXD5 290 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms