RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 CDC6Q99741 560 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 SLX1AQ9BQ83 275 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 DONSONQ9NYP3 566 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 TBX22Q9Y458 520 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 RAD54L2Q9Y4B4 1467 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 BLACEA4D250 179 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 ZNF561-AS1K7EIQ3 104 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 CYP27B1O15528 508 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 PDPK1O15530 556 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 KIF1CO43896 1103 aaKnown RBP3.41□□□□□ -1.86
PMS1-209ENST00000424059 HMMRO75330 724 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 IPO7O95373 1038 aaKnown RBP3.41□□□□□ -1.86
PMS1-209ENST00000424059 PEX11BO96011 259 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 AMY2AP04746 511 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 AMY2BP19961 511 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 ST5P78524 1137 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 IL13RA1P78552 427 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 BIRC2Q13490 618 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 FHL2Q14192 279 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 HSP90B2PQ58FF3 399 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 CRB2Q5IJ48 1285 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 TRIM68Q6AZZ1 485 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 SDE2Q6IQ49 451 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 USP30Q70CQ3 517 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 CATIPQ7Z7H3 387 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 ZBTB38Q8NAP3 1195 aaPredicted RBP3.41□□□□□ -1.86
PMS1-209ENST00000424059 LPPQ93052 612 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 IL17RAQ96F46 866 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 NEUROD6Q96NK8 337 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 NCAPGQ9BPX3 1015 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 PLA2G12BQ9BX93 195 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 OR10A2Q9H208 303 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 PNNQ9H307 717 aaKnown RBP3.41□□□□□ -1.86
PMS1-209ENST00000424059 ZNF703Q9H7S9 590 aaPredicted RBP3.41□□□□□ -1.86
PMS1-209ENST00000424059 CATSPERZQ9NTU4 200 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 BTBD7Q9P203 1132 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 PTPN22Q9Y2R2 807 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 NPIPB8E9PQR5 432 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 ADCY3O60266 1144 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 CDC14BO60729 498 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 EFCAB14O75071 495 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 CD53P19397 219 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 ECE1P42892 770 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 MEOX1P50221 254 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 NAP1L1P55209 391 aaKnown RBP3.41□□□□□ -1.86
PMS1-209ENST00000424059 SESN2P58004 480 aaPredicted RBP3.41□□□□□ -1.86
PMS1-209ENST00000424059 INHBEP58166 350 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 DPTQ07507 201 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 E2F5Q15329 346 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 MFSD4BQ5TF39 518 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 YOD1Q5VVQ6 348 aaPredicted RBP3.41□□□□□ -1.86
PMS1-209ENST00000424059 KLHL10Q6JEL2 608 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 CCDC70Q6NSX1 233 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 C16orf87Q6PH81 154 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 LRP10Q7Z4F1 713 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 DRC7Q8IY82 874 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 VPS37AQ8NEZ2 397 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 SVIPQ8NHG7 77 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 CACTINQ8WUQ7 758 aaKnown RBP3.41□□□□□ -1.86
PMS1-209ENST00000424059 CFHR4Q92496 578 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 CFAP53Q96M91 514 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 C12orf65Q9H3J6 166 aaKnown RBP3.41□□□□□ -1.86
PMS1-209ENST00000424059 SFMBT1Q9UHJ3 866 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 MYO15BQ96JP2 1530 aa3.41□□□□□ -1.86
PMS1-209ENST00000424059 A0A0G2JNJ9 132 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.4□□□□□ -1.87
PMS1-209ENST00000424059 PRAMEF25A6NGN4 478 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 MATN2O00339 956 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 HIP1RO75146 1068 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 NPTXRO95502 500 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 MPIG6BO95866 241 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 LDHCP07864 332 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 C6orf222P0C671 652 aaPredicted RBP3.4□□□□□ -1.87
PMS1-209ENST00000424059 U2AF1L5P0DN76 240 aaPredicted RBP3.4□□□□□ -1.87
PMS1-209ENST00000424059 KCNA2P16389 499 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 PDE6AP16499 860 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 MAN1A1P33908 653 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 TRPC1P48995 793 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 U2AF1Q01081 240 aaKnown RBP eCLIP3.4□□□□□ -1.87
PMS1-209ENST00000424059 GUCY1A3Q02108 690 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 HHEXQ03014 270 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 LSM12Q3MHD2 195 aaKnown RBP3.4□□□□□ -1.87
PMS1-209ENST00000424059 CCDC174Q6PII3 467 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 MTERF4Q7Z6M4 381 aaKnown RBP3.4□□□□□ -1.87
PMS1-209ENST00000424059 KRT77Q7Z794 578 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 PTRH1Q86Y79 214 aaKnown RBP3.4□□□□□ -1.87
PMS1-209ENST00000424059 HSCBQ8IWL3 235 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 IQCF2Q8IXL9 164 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 RPUSD2Q8IZ73 545 aaKnown RBP3.4□□□□□ -1.87
PMS1-209ENST00000424059 RTKN2Q8IZC4 609 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 SAMD3Q8N6K7 520 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 NGDNQ8NEJ9 315 aaKnown RBP3.4□□□□□ -1.87
PMS1-209ENST00000424059 CCDC47Q96A33 483 aaKnown RBP3.4□□□□□ -1.87
PMS1-209ENST00000424059 SLC39A13Q96H72 371 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 OR14A2Q96R54 314 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 MPHOSPH9Q99550 1183 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 POLR3CQ9BUI4 534 aaPredicted RBP3.4□□□□□ -1.87
PMS1-209ENST00000424059 TSPYL1Q9H0U9 437 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 CSRNP2Q9H175 543 aa3.4□□□□□ -1.87
PMS1-209ENST00000424059 OR10A5Q9H207 317 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms