RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 HVCN1Q96D96 273 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 GOPCQ9HD26 462 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 ODF2LQ9ULJ1 636 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 ATRNL1Q5VV63 1379 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 TLDC2A0PJX2 215 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 HOXD13P35453 343 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 PSMC6P62333 389 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 ZNF211Q13398 564 aaPredicted RBP15.56■□□□□ 0.08
MSH5-206ENST00000423982 AADACL2Q6P093 401 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 SPICE1Q8N0Z3 855 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 CCT6BQ92526 530 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 SGSM3Q96HU1 749 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 ERVK-5Q9HDB9 667 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 STXBP5LQ9Y2K9 1186 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 ESYT2A0FGR8 921 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 DDX3XO00571 662 aaKnown RBP eCLIP15.55■□□□□ 0.08
MSH5-206ENST00000423982 CTNND1O60716 968 aaKnown RBP15.55■□□□□ 0.08
MSH5-206ENST00000423982 EEF2P13639 858 aaKnown RBP15.55■□□□□ 0.08
MSH5-206ENST00000423982 MARSP56192 900 aaKnown RBP15.55■□□□□ 0.08
MSH5-206ENST00000423982 ICA1Q05084 483 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 KCNA1Q09470 495 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 NEDD9Q14511 834 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 EXOC3L4Q17RC7 722 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 GKAP1Q5VSY0 366 aaPredicted RBP15.55■□□□□ 0.08
MSH5-206ENST00000423982 DCAF12L1Q5VU92 463 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 NT5DC3Q86UY8 548 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 CCDC65Q8IXS2 484 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 ACTR5Q9H9F9 607 aaPredicted RBP15.55■□□□□ 0.08
MSH5-206ENST00000423982 BMP2KQ9NSY1 1161 aaPredicted RBP15.55■□□□□ 0.08
MSH5-206ENST00000423982 IGSF9BQ9UPX0 1349 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 C5orf60A6NFR6 353 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 CETN3O15182 167 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 MED24O75448 989 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 GFPT2O94808 682 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 ABCB4P21439 1286 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 ELF1P32519 619 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 TNFAIP1Q13829 316 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 AGBL2Q5U5Z8 902 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 TBC1D31Q96DN5 1066 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 PPP1R9AQ9ULJ8 1098 aa15.55■□□□□ 0.08
MSH5-206ENST00000423982 SRRM3A6NNA2 597 aaPredicted RBP15.54■□□□□ 0.08
MSH5-206ENST00000423982 USP17L15C9J2P7 530 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 USP17L13C9JLJ4 530 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 USP17L11C9JVI0 530 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 USP17L18D6R9N7 530 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 USP17L22D6RA61 530 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 USP17L17D6RBQ6 530 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 USP17L19D6RCP7 530 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 USP17L20D6RJB6 530 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 CES2O00748 559 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 CLIC2O15247 247 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 AKAP3O75969 853 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 TTLL1O95922 423 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 ECE1P42892 770 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 USP17L24Q0WX57 530 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 DRP2Q13474 957 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 TATDN1Q6P1N9 297 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 USP17L6PQ6QN14 398 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 FAM83AQ86UY5 434 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 CALR3Q96L12 384 aaKnown RBP15.54■□□□□ 0.08
MSH5-206ENST00000423982 TEPSINQ96N21 525 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 SELENOSQ9BQE4 189 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 EPB41L4BQ9H329 900 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 ARMCX3Q9UH62 379 aaPredicted RBP15.54■□□□□ 0.08
MSH5-206ENST00000423982 GGT7Q9UJ14 662 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 BTNL10A8MVZ5 291 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 ADM5C9JUS6 153 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 BUB1BO60566 1050 aaPredicted RBP15.54■□□□□ 0.08
MSH5-206ENST00000423982 NPM3O75607 178 aaKnown RBP15.54■□□□□ 0.08
MSH5-206ENST00000423982 GNA14O95837 355 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 RPSAP08865 295 aaKnown RBP15.54■□□□□ 0.08
MSH5-206ENST00000423982 CHN1P15882 459 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 WLSQ5T9L3 541 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 KCTD1Q719H9 257 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 XPO6Q96QU8 1125 aaKnown RBP15.54■□□□□ 0.08
MSH5-206ENST00000423982 LRRC27Q9C0I9 530 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 SIX2Q9NPC8 291 aa15.54■□□□□ 0.08
MSH5-206ENST00000423982 SPDYE3A6NKU9 549 aa15.53■□□□□ 0.08
MSH5-206ENST00000423982 RSPH10B2B2RC85 870 aa15.53■□□□□ 0.08
MSH5-206ENST00000423982 GRIN3BO60391 1043 aa15.53■□□□□ 0.08
MSH5-206ENST00000423982 AFPP02771 609 aaKnown RBP15.53■□□□□ 0.08
MSH5-206ENST00000423982 PAEPP09466 180 aa15.53■□□□□ 0.08
MSH5-206ENST00000423982 H2AFZP0C0S5 128 aa15.53■□□□□ 0.08
MSH5-206ENST00000423982 RSPH10BP0C881 870 aa15.53■□□□□ 0.08
MSH5-206ENST00000423982 NF2P35240 595 aa15.53■□□□□ 0.08
MSH5-206ENST00000423982 GALCP54803 685 aa15.53■□□□□ 0.08
MSH5-206ENST00000423982 IFI35P80217 286 aaPredicted RBP15.53■□□□□ 0.08
MSH5-206ENST00000423982 POU5F1Q01860 360 aaKnown RBP15.53■□□□□ 0.08
MSH5-206ENST00000423982 ACCSLQ4AC99 568 aa15.53■□□□□ 0.08
MSH5-206ENST00000423982 H2AFVQ71UI9 128 aa15.53■□□□□ 0.08
MSH5-206ENST00000423982 LNX1Q8TBB1 728 aaPredicted RBP15.53■□□□□ 0.08
MSH5-206ENST00000423982 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.53■□□□□ 0.08
MSH5-206ENST00000423982 JMJD4Q9H9V9 463 aa15.53■□□□□ 0.08
MSH5-206ENST00000423982 DICER1Q9UPY3 1922 aaKnown RBP15.53■□□□□ 0.08
MSH5-206ENST00000423982 PPP1R12BO60237 982 aaPredicted RBP15.53■□□□□ 0.08
MSH5-206ENST00000423982 PABPC4Q13310 644 aaKnown RBP eCLIP15.53■□□□□ 0.08
MSH5-206ENST00000423982 ORC2Q13416 577 aaPredicted RBP15.53■□□□□ 0.08
MSH5-206ENST00000423982 HIBCHQ6NVY1 386 aaPredicted RBP15.53■□□□□ 0.08
MSH5-206ENST00000423982 SLFN11Q7Z7L1 901 aa15.53■□□□□ 0.08
MSH5-206ENST00000423982 SFR1Q86XK3 245 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms