RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 A0A0U1RQF3 1178 aa18.14■□□□□ 0.49
COL18A1-205ENST00000423214 EOMESO95936 686 aa18.14■□□□□ 0.49
COL18A1-205ENST00000423214 ATF7P17544 494 aaPredicted RBP18.14■□□□□ 0.49
COL18A1-205ENST00000423214 CYP3A7P24462 503 aa18.14■□□□□ 0.49
COL18A1-205ENST00000423214 DRP2Q13474 957 aa18.14■□□□□ 0.49
COL18A1-205ENST00000423214 TWF2Q6IBS0 349 aaKnown RBP18.14■□□□□ 0.49
COL18A1-205ENST00000423214 KRT25Q7Z3Z0 450 aa18.14■□□□□ 0.49
COL18A1-205ENST00000423214 ETNPPLQ8TBG4 499 aa18.14■□□□□ 0.49
COL18A1-205ENST00000423214 EDAQ92838 391 aa18.14■□□□□ 0.49
COL18A1-205ENST00000423214 NIFKQ9BYG3 293 aaKnown RBP18.14■□□□□ 0.49
COL18A1-205ENST00000423214 INO80BQ9C086 356 aaPredicted RBP18.14■□□□□ 0.49
COL18A1-205ENST00000423214 PIN4Q9Y237 131 aaKnown RBP18.14■□□□□ 0.49
COL18A1-205ENST00000423214 MYO10Q9HD67 2058 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 A0A087WZ62 844 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 TMEM150BA6NC51 233 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 DDX11L8A8MPP1 907 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 CSDE1O75534 798 aaKnown RBP18.13■□□□□ 0.49
COL18A1-205ENST00000423214 CDKL5O76039 1030 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 SMC1AQ14683 1233 aaKnown RBP18.13■□□□□ 0.49
COL18A1-205ENST00000423214 BMS1Q14692 1282 aaKnown RBP18.13■□□□□ 0.49
COL18A1-205ENST00000423214 CBX2Q14781 532 aaPredicted RBP18.13■□□□□ 0.49
COL18A1-205ENST00000423214 INF2Q27J81 1249 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 LETM2Q2VYF4 491 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 ANKRD54Q6NXT1 300 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 ZNF410Q86VK4 478 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 RHPN2Q8IUC4 686 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 RSPH1Q8WYR4 309 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 NLRP4Q96MN2 994 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 AIFM3Q96NN9 605 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 JPH2Q9BR39 696 aaPredicted RBP18.13■□□□□ 0.49
COL18A1-205ENST00000423214 SH2D3AQ9BRG2 576 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 FDXACB1Q9BRP7 624 aaPredicted RBP18.13■□□□□ 0.49
COL18A1-205ENST00000423214 LARP6Q9BRS8 491 aaKnown RBP18.13■□□□□ 0.49
COL18A1-205ENST00000423214 TM6SF1Q9BZW5 370 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 CHST12Q9NRB3 414 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 ZDBF2Q9HCK1 2354 aa18.13■□□□□ 0.49
COL18A1-205ENST00000423214 C2orf16Q68DN1 1984 aa18.12■□□□□ 0.49
COL18A1-205ENST00000423214 CCDC194A0A1B0GVG4 234 aa18.12■□□□□ 0.49
COL18A1-205ENST00000423214 HIDE1A8MVS5 230 aa18.12■□□□□ 0.49
COL18A1-205ENST00000423214 M0R2N6 131 aa18.12■□□□□ 0.49
COL18A1-205ENST00000423214 ZC3H11AO75152 810 aaKnown RBP eCLIP18.12■□□□□ 0.49
COL18A1-205ENST00000423214 CENPBP07199 599 aaPredicted RBP18.12■□□□□ 0.49
COL18A1-205ENST00000423214 SKIP12755 728 aa18.12■□□□□ 0.49
COL18A1-205ENST00000423214 XBP1P17861 261 aa18.12■□□□□ 0.49
COL18A1-205ENST00000423214 ALDH7A1P49419 539 aaKnown RBP18.12■□□□□ 0.49
COL18A1-205ENST00000423214 PSMC5P62195 406 aa18.12■□□□□ 0.49
COL18A1-205ENST00000423214 ZNF598Q86UK7 904 aaKnown RBP18.12■□□□□ 0.49
COL18A1-205ENST00000423214 SLC39A11Q8N1S5 342 aa18.12■□□□□ 0.49
COL18A1-205ENST00000423214 SUSD6Q92537 303 aa18.12■□□□□ 0.49
COL18A1-205ENST00000423214 CASP10Q92851 521 aa18.12■□□□□ 0.49
COL18A1-205ENST00000423214 TMEM169Q96HH4 297 aa18.12■□□□□ 0.49
COL18A1-205ENST00000423214 MBOAT7Q96N66 472 aa18.12■□□□□ 0.49
COL18A1-205ENST00000423214 APOL5Q9BWW9 433 aa18.12■□□□□ 0.49
COL18A1-205ENST00000423214 PDRG1Q9NUG6 133 aa18.12■□□□□ 0.49
COL18A1-205ENST00000423214 SUCLA2Q9P2R7 463 aaPredicted RBP18.12■□□□□ 0.49
COL18A1-205ENST00000423214 TMEM221A6NGB7 291 aa18.11■□□□□ 0.49
COL18A1-205ENST00000423214 M0R296 226 aa18.11■□□□□ 0.49
COL18A1-205ENST00000423214 SLC37A4O43826 429 aa18.11■□□□□ 0.49
COL18A1-205ENST00000423214 DKC1O60832 514 aaKnown RBP eCLIP18.11■□□□□ 0.49
COL18A1-205ENST00000423214 PHKA2P46019 1235 aa18.11■□□□□ 0.49
COL18A1-205ENST00000423214 BCAR1P56945 870 aa18.11■□□□□ 0.49
COL18A1-205ENST00000423214 TPRNQ4KMQ1 711 aa18.11■□□□□ 0.49
COL18A1-205ENST00000423214 PLA2G4FQ68DD2 849 aa18.11■□□□□ 0.49
COL18A1-205ENST00000423214 B3GNT9Q6UX72 402 aa18.11■□□□□ 0.49
COL18A1-205ENST00000423214 TMEM184AQ6ZMB5 413 aa18.11■□□□□ 0.49
COL18A1-205ENST00000423214 TRIM67Q6ZTA4 783 aa18.11■□□□□ 0.49
COL18A1-205ENST00000423214 CATSPER4Q7RTX7 472 aa18.11■□□□□ 0.49
COL18A1-205ENST00000423214 SUGP1Q8IWZ8 645 aaKnown RBP18.11■□□□□ 0.49
COL18A1-205ENST00000423214 TMEM87AQ8NBN3 555 aa18.11■□□□□ 0.49
COL18A1-205ENST00000423214 FBXL18Q96ME1 805 aa18.11■□□□□ 0.49
COL18A1-205ENST00000423214 SLKQ9H2G2 1235 aaPredicted RBP18.11■□□□□ 0.49
COL18A1-205ENST00000423214 KCNJ14Q9UNX9 436 aa18.11■□□□□ 0.49
COL18A1-205ENST00000423214 STK36Q9NRP7 1315 aa18.1■□□□□ 0.49
COL18A1-205ENST00000423214 IGKV6-21A0A0C4DH24 114 aa18.1■□□□□ 0.49
COL18A1-205ENST00000423214 CARNS1A5YM72 827 aa18.1■□□□□ 0.49
COL18A1-205ENST00000423214 NT5C1B-RDH14C9J2C7 533 aa18.1■□□□□ 0.49
COL18A1-205ENST00000423214 MAFO75444 373 aaPredicted RBP18.1■□□□□ 0.49
COL18A1-205ENST00000423214 GCFC2P16383 781 aaKnown RBP18.1■□□□□ 0.49
COL18A1-205ENST00000423214 HOXB8P17481 243 aaPredicted RBP18.1■□□□□ 0.49
COL18A1-205ENST00000423214 SP100P23497 879 aaPredicted RBP18.1■□□□□ 0.49
COL18A1-205ENST00000423214 RAB27AP51159 221 aa18.1■□□□□ 0.49
COL18A1-205ENST00000423214 ZXDAP98168 799 aa18.1■□□□□ 0.49
COL18A1-205ENST00000423214 NHLH1Q02575 133 aa18.1■□□□□ 0.49
COL18A1-205ENST00000423214 RNASELQ05823 741 aaKnown RBP18.1■□□□□ 0.49
COL18A1-205ENST00000423214 KCNC3Q14003 757 aa18.1■□□□□ 0.49
COL18A1-205ENST00000423214 NPY5RQ15761 445 aa18.1■□□□□ 0.49
COL18A1-205ENST00000423214 GLB1LQ6UWU2 654 aa18.1■□□□□ 0.49
COL18A1-205ENST00000423214 NEK8Q86SG6 692 aa18.1■□□□□ 0.49
COL18A1-205ENST00000423214 ZBTB33Q86T24 672 aa18.1■□□□□ 0.49
COL18A1-205ENST00000423214 ALYREFQ86V81 257 aaKnown RBP18.1■□□□□ 0.49
COL18A1-205ENST00000423214 SLC7A3Q8WY07 619 aa18.1■□□□□ 0.49
COL18A1-205ENST00000423214 CEP89Q96ST8 783 aa18.1■□□□□ 0.49
COL18A1-205ENST00000423214 INPP5FQ9Y2H2 1132 aa18.1■□□□□ 0.49
COL18A1-205ENST00000423214 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.09■□□□□ 0.49
COL18A1-205ENST00000423214 MARCH6O60337 910 aa18.09■□□□□ 0.49
COL18A1-205ENST00000423214 STBD1O95210 358 aa18.09■□□□□ 0.49
COL18A1-205ENST00000423214 QARSP47897 775 aaKnown RBP18.09■□□□□ 0.49
COL18A1-205ENST00000423214 POLGP54098 1239 aaPredicted RBP18.09■□□□□ 0.49
COL18A1-205ENST00000423214 PPP2R5CQ13362 524 aa18.09■□□□□ 0.49
COL18A1-205ENST00000423214 LONRF3Q496Y0 759 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms