RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 C1orf53Q5VUE5 145 aa13.79□□□□□ -0.2
TMEM53-206ENST00000420706 TAF2Q6P1X5 1199 aa13.79□□□□□ -0.2
TMEM53-206ENST00000420706 SERINC5Q86VE9 423 aa13.79□□□□□ -0.2
TMEM53-206ENST00000420706 KSR1Q8IVT5 923 aa13.79□□□□□ -0.2
TMEM53-206ENST00000420706 FAM178BQ8IXR5 827 aa13.79□□□□□ -0.2
TMEM53-206ENST00000420706 KIAA0895Q8NCT3 520 aa13.79□□□□□ -0.2
TMEM53-206ENST00000420706 MAP7D2Q96T17 732 aa13.79□□□□□ -0.2
TMEM53-206ENST00000420706 FGFBP2Q9BYJ0 223 aa13.79□□□□□ -0.2
TMEM53-206ENST00000420706 GTPBP4Q9BZE4 634 aaKnown RBP13.79□□□□□ -0.2
TMEM53-206ENST00000420706 MRPL44Q9H9J2 332 aaKnown RBP13.79□□□□□ -0.2
TMEM53-206ENST00000420706 AKT3Q9Y243 479 aa13.79□□□□□ -0.2
TMEM53-206ENST00000420706 CCDC169A6NNP5 214 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 SLC16A4O15374 487 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 B4GALT4O60513 344 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 CD4P01730 458 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 VTNP04004 478 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 SRGAP2CP0DJJ0 459 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 CDC42EP1Q00587 391 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 POU5F1BQ06416 359 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 TYRO3Q06418 890 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 PTK7Q13308 1070 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 CAPSQ13938 189 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 SNX17Q15036 470 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 HAUS6Q7Z4H7 955 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 NECAB2Q7Z6G3 386 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 RPAINQ86UA6 219 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 FAM126BQ8IXS8 530 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 SMYD4Q8IYR2 804 aaPredicted RBP13.78□□□□□ -0.2
TMEM53-206ENST00000420706 SLC17A8Q8NDX2 589 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 GLIS3Q8NEA6 775 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 WNT8BQ93098 351 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 STRA6Q9BX79 667 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 TRPV6Q9H1D0 765 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 ST6GALNAC4Q9H4F1 302 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 KMT5AQ9NQR1 393 aa13.78□□□□□ -0.2
TMEM53-206ENST00000420706 A0A087WZ62 844 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 PPP1R3GB7ZBB8 358 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 GPR32O75388 356 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 PRPF6O94906 941 aaKnown RBP13.77□□□□□ -0.21
TMEM53-206ENST00000420706 GCNT3O95395 438 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 CCDC192P0DO97 292 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 MYBP10242 640 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
TMEM53-206ENST00000420706 PRCPP42785 496 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 GPC3P51654 580 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 CASP5P51878 434 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 NLRP11P59045 1033 aaKnown RBP13.77□□□□□ -0.21
TMEM53-206ENST00000420706 ZNF445P59923 1031 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 GTF2BQ00403 316 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 TMEM62Q0P6H9 643 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 TFDP1Q14186 410 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 TRIM71Q2Q1W2 868 aaKnown RBP13.77□□□□□ -0.21
TMEM53-206ENST00000420706 ZC2HC1CQ53FD0 456 aaPredicted RBP13.77□□□□□ -0.21
TMEM53-206ENST00000420706 COBLL1Q53SF7 1204 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 LRSAM1Q6UWE0 723 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 EPM2AIP1Q7L775 607 aaPredicted RBP13.77□□□□□ -0.21
TMEM53-206ENST00000420706 ANKRD33Q7Z3H0 272 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 RNF149Q8NC42 400 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 TMEM161BQ8NDZ6 487 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 DEPTORQ8TB45 409 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 ZNF507Q8TCN5 953 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 DHX38Q92620 1227 aaKnown RBP13.77□□□□□ -0.21
TMEM53-206ENST00000420706 KCNN1Q92952 543 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 ZNF668Q96K58 619 aaPredicted RBP13.77□□□□□ -0.21
TMEM53-206ENST00000420706 FDXACB1Q9BRP7 624 aaPredicted RBP13.77□□□□□ -0.21
TMEM53-206ENST00000420706 ANP32EQ9BTT0 268 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 KIFC3Q9BVG8 833 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 ADAMTS10Q9H324 1103 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 ANO10Q9NW15 660 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 NOD1Q9Y239 953 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 PCDHB13Q9Y5F0 798 aa13.77□□□□□ -0.21
TMEM53-206ENST00000420706 MROH7Q68CQ1 1323 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 ADGRA3Q8IWK6 1321 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 LRRIQ4A6NIV6 560 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 H0YCG3 227 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 K7ENM7 598 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 PPP1R37O75864 691 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 RPLP2P05387 115 aaKnown RBP13.76□□□□□ -0.21
TMEM53-206ENST00000420706 PTENP60484 403 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 STX1AQ16623 288 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 DPCR1Q3MIW9 517 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 CDCA2Q69YH5 1023 aaPredicted RBP13.76□□□□□ -0.21
TMEM53-206ENST00000420706 UBE2Q1Q7Z7E8 422 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 RSPH3Q86UC2 560 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 ZNF410Q86VK4 478 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 IFNLR1Q8IU57 520 aaPredicted RBP13.76□□□□□ -0.21
TMEM53-206ENST00000420706 ADSSL1Q8N142 457 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 ZNF710Q8N1W2 664 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 GUF1Q8N442 669 aaKnown RBP13.76□□□□□ -0.21
TMEM53-206ENST00000420706 MLKLQ8NB16 471 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 SCFD1Q8WVM8 642 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 NLRP4Q96MN2 994 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 TOX2Q96NM4 488 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 PPP1R16BQ96T49 567 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 NFKBIZQ9BYH8 718 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 TMEM134Q9H6X4 195 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 CDHR5Q9HBB8 845 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 IFT122Q9HBG6 1241 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 ARHGAP28Q9P2N2 729 aa13.76□□□□□ -0.21
TMEM53-206ENST00000420706 MAPK8IP1Q9UQF2 711 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms