RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ANKRD40Q6AI12 368 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 SESTD1Q86VW0 696 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 SLC9A9Q8IVB4 645 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 IFT74Q96LB3 600 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 CEP63Q96MT8 703 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 DUSP9Q99956 384 aaKnown RBP15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 TMEM134Q9H6X4 195 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 TYW1Q9NV66 732 aaKnown RBP15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 FANCLQ9NW38 375 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 CTNND2Q9UQB3 1225 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 TRPC6Q9Y210 931 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 ARID2Q68CP9 1835 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 SFI1A8K8P3 1242 aa15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 CABYRO75952 493 aa15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 RPLP2P05387 115 aaKnown RBP15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 EEF1GP26641 437 aaKnown RBP15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 DNM2P50570 870 aa15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 PMS1P54277 932 aaKnown RBP15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 MARSP56192 900 aaKnown RBP15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 FKBP3Q00688 224 aaKnown RBP15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 TRIM32Q13049 653 aa15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 HAUS6Q7Z4H7 955 aa15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 UBE2Q1Q7Z7E8 422 aa15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 IFNLR1Q8IU57 520 aaPredicted RBP15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 PCSK9Q8NBP7 692 aaKnown RBP15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 GLIS3Q8NEA6 775 aa15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 U2AF1L4Q8WU68 220 aaKnown RBP15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 PSPC1Q8WXF1 523 aaKnown RBP15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 TSG101Q99816 390 aa15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 SH2D3AQ9BRG2 576 aa15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 TSEN34Q9BSV6 310 aaKnown RBP15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 FGFBP2Q9BYJ0 223 aa15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 UNC93B1Q9H1C4 597 aa15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 ZHX3Q9H4I2 956 aa15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 HMX1Q9NP08 348 aaPredicted RBP15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 XPNPEP3Q9NQH7 507 aa15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 PAK6Q9NQU5 681 aaPredicted RBP15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 MAPK8IP1Q9UQF2 711 aa15.7■□□□□ 0.1
SHMT1P1-201ENST00000419974 GCNT3O95395 438 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 GNA14O95837 355 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 ZNF286BP0CG31 522 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 MYBP10242 640 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 GLRA2P23416 452 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 MARK3P27448 753 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 CCND3P30281 292 aaPredicted RBP15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 NMT1P30419 496 aaKnown RBP15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 EFNA5P52803 228 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 PEX3P56589 373 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 MKRN4PQ13434 485 aaPredicted RBP15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 MFSD10Q14728 455 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 MARCH8Q5T0T0 291 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 CDCA2Q69YH5 1023 aaPredicted RBP15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 KLHL10Q6JEL2 608 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 MTHFD1LQ6UB35 978 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 FILIP1Q7Z7B0 1213 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 MAP4K3Q8IVH8 894 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 FAM114A1Q8IWE2 563 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 ANP32BQ92688 251 aaKnown RBP15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 PDLIM2Q96JY6 352 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 CTAGE1Q96RT6 745 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 MTG1Q9BT17 334 aaPredicted RBP15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 SEZ6LQ9BYH1 1024 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 POLR3FQ9H1D9 316 aaPredicted RBP15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 GPRC5CQ9NQ84 441 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 KMT5AQ9NQR1 393 aa15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 LIMA1Q9UHB6 759 aaKnown RBP15.69■□□□□ 0.1
SHMT1P1-201ENST00000419974 MOXD2PA6NHM9 499 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 TGFB1I1O43294 461 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 CALUO43852 315 aaPredicted RBP15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 PIGRP01833 764 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 GNAT1P11488 350 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 KLRC1P26715 233 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 TMOD1P28289 359 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 PSEN2P49810 448 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 PPFIA1Q13136 1202 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 LRRC41Q15345 812 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 GRIK4Q16099 956 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 KIAA0753Q2KHM9 967 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 GNASQ5JWF2 1037 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 LHX8Q68G74 356 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 LRRC55Q6ZSA7 311 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 APTXQ7Z2E3 356 aaKnown RBP15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 IRF2BP1Q8IU81 584 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 CSGALNACT2Q8N6G5 542 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 BSNDQ8WZ55 320 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 MRFAP1L1Q96HT8 127 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 ACCSQ96QU6 501 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 CRISPLD2Q9H0B8 497 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 GBP3Q9H0R5 595 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 C2orf40Q9H1Z8 148 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 DMAC2Q9NW81 257 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 TBX20Q9UMR3 447 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 EXOC7Q9UPT5 735 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 ZMYM2Q9UBW7 1377 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 SMIM35A0A1B0GVV1 85 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 K7ENM7 598 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 C6orf222P0C671 652 aaPredicted RBP15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 SMIM10L2AP0DMW4 78 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 SMIM10L2BP0DMW5 78 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 RPL13P26373 211 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms