RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 VOPP1Q96AW1 172 aa4.69□□□□□ -1.66
SDCBPP3-201ENST00000419629 CLUHP3Q96NS8 147 aa4.69□□□□□ -1.66
SDCBPP3-201ENST00000419629 SAMD15Q9P1V8 674 aa4.69□□□□□ -1.66
SDCBPP3-201ENST00000419629 TBX22Q9Y458 520 aa4.69□□□□□ -1.66
SDCBPP3-201ENST00000419629 ASB1Q9Y576 335 aa4.69□□□□□ -1.66
SDCBPP3-201ENST00000419629 CD2APQ9Y5K6 639 aa4.69□□□□□ -1.66
SDCBPP3-201ENST00000419629 TNPO3Q9Y5L0 923 aaKnown RBP4.69□□□□□ -1.66
SDCBPP3-201ENST00000419629 B3GALT1Q9Y5Z6 326 aa4.69□□□□□ -1.66
SDCBPP3-201ENST00000419629 GOLGA8BA8MQT2 603 aa4.68□□□□□ -1.66
SDCBPP3-201ENST00000419629 DNAJC8O75937 253 aaPredicted RBP4.68□□□□□ -1.66
SDCBPP3-201ENST00000419629 BMP5P22003 454 aa4.68□□□□□ -1.66
SDCBPP3-201ENST00000419629 HSD3B2P26439 372 aa4.68□□□□□ -1.66
SDCBPP3-201ENST00000419629 ADRA1BP35368 520 aa4.68□□□□□ -1.66
SDCBPP3-201ENST00000419629 ADAM8P78325 824 aa4.68□□□□□ -1.66
SDCBPP3-201ENST00000419629 OVCH1Q7RTY7 1134 aa4.68□□□□□ -1.66
SDCBPP3-201ENST00000419629 MRGPREQ86SM8 312 aa4.68□□□□□ -1.66
SDCBPP3-201ENST00000419629 GSPT2Q8IYD1 628 aaKnown RBP4.68□□□□□ -1.66
SDCBPP3-201ENST00000419629 AHI1Q8N157 1196 aa4.68□□□□□ -1.66
SDCBPP3-201ENST00000419629 LPPQ93052 612 aa4.68□□□□□ -1.66
SDCBPP3-201ENST00000419629 MFSD3Q96ES6 412 aa4.68□□□□□ -1.66
SDCBPP3-201ENST00000419629 GPHA2Q96T91 129 aa4.68□□□□□ -1.66
SDCBPP3-201ENST00000419629 BOCQ9BWV1 1114 aa4.68□□□□□ -1.66
SDCBPP3-201ENST00000419629 SLC6A15Q9H2J7 730 aa4.68□□□□□ -1.66
SDCBPP3-201ENST00000419629 XDHP47989 1333 aa4.68□□□□□ -1.66
SDCBPP3-201ENST00000419629 RPS6KA4O75676 772 aa4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 JMJD7P0C870 316 aa4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 PROZP22891 400 aa4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 SDHAP31040 664 aa4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 MAN2A2P49641 1150 aa4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 NEK4P51957 841 aa4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 PLEKHG4Q58EX7 1191 aa4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 CATSPEREQ5SY80 951 aa4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 PIK3R6Q5UE93 754 aa4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 SDE2Q6IQ49 451 aa4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 KLHDC10Q6PID8 442 aa4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 KIAA0907Q7Z7F0 614 aaPredicted RBP4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 PPM1KQ8N3J5 372 aa4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 CHST14Q8NCH0 376 aa4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 GCDHQ92947 438 aaPredicted RBP4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 TMX1Q9H3N1 280 aa4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 NRDE2Q9H7Z3 1164 aa4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 ZKSCAN5Q9Y2L8 839 aa4.67□□□□□ -1.66
SDCBPP3-201ENST00000419629 C2orf78A6NCI8 922 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 H7C1D1 291 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 M0R2C6 588 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 TRAF5O00463 557 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 H2AFYO75367 372 aaKnown RBP4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 SDSP20132 328 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 PTGS2P35354 604 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 SESN2P58004 480 aaPredicted RBP4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 IRF9Q00978 393 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 ZNF460Q14592 562 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 ZNF174Q15697 407 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 TKFCQ3LXA3 575 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 MBNL2Q5VZF2 373 aaKnown RBP4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 CDCA2Q69YH5 1023 aaPredicted RBP4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 CNNM4Q6P4Q7 775 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 GIMAP6Q6P9H5 292 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 FAM111BQ6SJ93 734 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 GAREM2Q75VX8 874 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 LRRTM3Q86VH5 581 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 KIF18BQ86Y91 864 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 SYNE4Q8N205 404 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 GPR150Q8NGU9 434 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 HAS1Q92839 578 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 ERCC4Q92889 916 aaPredicted RBP4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 E2F7Q96AV8 911 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 FOXRED1Q96CU9 486 aaPredicted RBP4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 SLC7A6OSQ96CW6 309 aaPredicted RBP4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 RPL10LQ96L21 214 aaKnown RBP4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 PCIF1Q9H4Z3 704 aa4.66□□□□□ -1.66
SDCBPP3-201ENST00000419629 CBX4O00257 560 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 GAS7O60861 476 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 GLRX3O76003 335 aaKnown RBP4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 GCP02774 474 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 KCNA6P17658 529 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 FBLP22087 321 aaKnown RBP4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 LMO1P25800 156 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 RABGGTBP53611 331 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 ANTXR2P58335 489 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 TMEM132BQ14DG7 1078 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 SART3Q15020 963 aaKnown RBP4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 ELAVL1Q15717 326 aaKnown RBP4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 C21orf62-AS1Q17RA5 79 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 KRT40Q6A162 431 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 ABHD17CQ6PCB6 329 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 RHOUQ7L0Q8 258 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 OTOP1Q7RTM1 612 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 RTN4RL1Q86UN2 441 aaPredicted RBP4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 DHX37Q8IY37 1157 aaKnown RBP4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 ANKRD53Q8N9V6 530 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 GFM2Q969S9 779 aaKnown RBP4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 LENG9Q96B70 501 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 GPR87Q9BY21 358 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 ACSS2Q9NR19 701 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 IFT57Q9NWB7 429 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 SAE1Q9UBE0 346 aaPredicted RBP4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 MAGEL2Q9UJ55 1249 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 DENND2AQ9ULE3 1009 aa4.65□□□□□ -1.67
SDCBPP3-201ENST00000419629 RBM8AQ9Y5S9 174 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms