RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 FAM173BQ6P4H8 233 aa11.73□□□□□ -0.53
RFC1-203ENST00000418436 PIGOQ8TEQ8 1089 aa11.73□□□□□ -0.53
RFC1-203ENST00000418436 TMEM40Q8WWA1 233 aa11.73□□□□□ -0.53
RFC1-203ENST00000418436 SLC7A3Q8WY07 619 aa11.73□□□□□ -0.53
RFC1-203ENST00000418436 NACC1Q96RE7 527 aa11.73□□□□□ -0.53
RFC1-203ENST00000418436 MAP7D2Q96T17 732 aa11.73□□□□□ -0.53
RFC1-203ENST00000418436 SLC9A7Q96T83 725 aa11.73□□□□□ -0.53
RFC1-203ENST00000418436 MMTAG2Q9BU76 263 aaKnown RBP11.73□□□□□ -0.53
RFC1-203ENST00000418436 DBR1Q9UK59 544 aaKnown RBP11.73□□□□□ -0.53
RFC1-203ENST00000418436 MORC2Q9Y6X9 1032 aaPredicted RBP11.73□□□□□ -0.53
RFC1-203ENST00000418436 A0A087WWV3 80 aa11.72□□□□□ -0.53
RFC1-203ENST00000418436 PP2D1A8MPX8 630 aa11.72□□□□□ -0.53
RFC1-203ENST00000418436 GRXCR1A8MXD5 290 aa11.72□□□□□ -0.53
RFC1-203ENST00000418436 GAS2O43903 313 aaKnown RBP11.72□□□□□ -0.53
RFC1-203ENST00000418436 ZSCAN22P10073 491 aaPredicted RBP11.72□□□□□ -0.53
RFC1-203ENST00000418436 ATP2A2P16615 1042 aaKnown RBP11.72□□□□□ -0.53
RFC1-203ENST00000418436 CD52P31358 61 aa11.72□□□□□ -0.53
RFC1-203ENST00000418436 CCT6AP40227 531 aaKnown RBP11.72□□□□□ -0.53
RFC1-203ENST00000418436 DNM2P50570 870 aa11.72□□□□□ -0.53
RFC1-203ENST00000418436 POLGP54098 1239 aaPredicted RBP11.72□□□□□ -0.53
RFC1-203ENST00000418436 NLRP11P59045 1033 aaKnown RBP11.72□□□□□ -0.53
RFC1-203ENST00000418436 KIZQ2M2Z5 673 aa11.72□□□□□ -0.53
RFC1-203ENST00000418436 XPNPEP1Q9NQW7 623 aa11.72□□□□□ -0.53
RFC1-203ENST00000418436 SUCLA2Q9P2R7 463 aaPredicted RBP11.72□□□□□ -0.53
RFC1-203ENST00000418436 PADI3Q9ULW8 664 aa11.72□□□□□ -0.53
RFC1-203ENST00000418436 AKT3Q9Y243 479 aa11.72□□□□□ -0.53
RFC1-203ENST00000418436 NOC2LQ9Y3T9 749 aaKnown RBP11.72□□□□□ -0.53
RFC1-203ENST00000418436 CLIC4Q9Y696 253 aa11.72□□□□□ -0.53
RFC1-203ENST00000418436 TTC3P53804 2025 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.71□□□□□ -0.53
RFC1-203ENST00000418436 VWA3AA6NCI4 1184 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 DGAT1O75907 488 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 EIF4BP23588 611 aaKnown RBP11.71□□□□□ -0.53
RFC1-203ENST00000418436 CDC25AP30304 524 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 KCNJ6P48051 423 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 DEFB103AP81534 67 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 EMC2Q15006 297 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 HYIQ5T013 277 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 KRT79Q5XKE5 535 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.71□□□□□ -0.53
RFC1-203ENST00000418436 HERC6Q8IVU3 1022 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 KCTD17Q8N5Z5 321 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 SNX29Q8TEQ0 813 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 TCP11Q8WWU5 503 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 AK8Q96MA6 479 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 USP28Q96RU2 1077 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 OSMRQ99650 979 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 FTHL17Q9BXU8 183 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 PBX4Q9BYU1 374 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 TMX1Q9H3N1 280 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 ERVK-5Q9HDB9 667 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 KIAA1024Q9UPX6 916 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 GINS2Q9Y248 185 aa11.71□□□□□ -0.53
RFC1-203ENST00000418436 SZT2Q5T011 3432 aa11.71□□□□□ -0.54
RFC1-203ENST00000418436 ENPP3O14638 875 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 GPR182O15218 404 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 ASAP2O43150 1006 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 SLC26A4O43511 780 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 RPS6KA5O75582 802 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 F13A1P00488 732 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 DARSP14868 501 aaKnown RBP11.7□□□□□ -0.54
RFC1-203ENST00000418436 ARL2P36404 184 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 LONP1P36776 959 aaKnown RBP11.7□□□□□ -0.54
RFC1-203ENST00000418436 NASPP49321 788 aaPredicted RBP11.7□□□□□ -0.54
RFC1-203ENST00000418436 GRIN1Q05586 938 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 PAK2Q13177 524 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 PKP1Q13835 747 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 BECN1Q14457 450 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 RAB30Q15771 203 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 ODR4Q5SWX8 454 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 RTN4RL1Q86UN2 441 aaPredicted RBP11.7□□□□□ -0.54
RFC1-203ENST00000418436 ZNF410Q86VK4 478 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 FAM228AQ86W67 206 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 RHPN2Q8IUC4 686 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 PRPF31Q8WWY3 499 aaKnown RBP11.7□□□□□ -0.54
RFC1-203ENST00000418436 LINC01599Q8WXQ3 324 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 TMEM143Q96AN5 459 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 PNMA5Q96PV4 448 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 PPP1R16BQ96T49 567 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 MTRQ99707 1265 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 ATP6V0A4Q9HBG4 840 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 DDX19AQ9NUU7 478 aaKnown RBP11.7□□□□□ -0.54
RFC1-203ENST00000418436 ST3GAL5Q9UNP4 418 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 PCDHA11Q9Y5I1 949 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 COL4A3BPQ9Y5P4 624 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 ADGRG1Q9Y653 693 aa11.7□□□□□ -0.54
RFC1-203ENST00000418436 TMEM265A0A087WTH1 108 aa11.69□□□□□ -0.54
RFC1-203ENST00000418436 A0A087WZ62 844 aa11.69□□□□□ -0.54
RFC1-203ENST00000418436 GJB5O95377 273 aa11.69□□□□□ -0.54
RFC1-203ENST00000418436 AMHP03971 560 aa11.69□□□□□ -0.54
RFC1-203ENST00000418436 DNAJB2P25686 324 aa11.69□□□□□ -0.54
RFC1-203ENST00000418436 RABGGTBP53611 331 aa11.69□□□□□ -0.54
RFC1-203ENST00000418436 POU5F1BQ06416 359 aa11.69□□□□□ -0.54
RFC1-203ENST00000418436 LAMTOR4Q0VGL1 99 aa11.69□□□□□ -0.54
RFC1-203ENST00000418436 GRB10Q13322 594 aa11.69□□□□□ -0.54
RFC1-203ENST00000418436 SLC39A14Q15043 492 aa11.69□□□□□ -0.54
RFC1-203ENST00000418436 KSR1Q8IVT5 923 aa11.69□□□□□ -0.54
RFC1-203ENST00000418436 CRIPAKQ8N1N5 446 aa11.69□□□□□ -0.54
RFC1-203ENST00000418436 PSPC1Q8WXF1 523 aaKnown RBP11.69□□□□□ -0.54
RFC1-203ENST00000418436 TOP1MTQ969P6 601 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms