RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 UNC45AQ9H3U1 944 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 COG5Q9UP83 839 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 NHSQ6T4R5 1651 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 EMSYQ7Z589 1322 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 HIP1RO75146 1068 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 SHBGP04278 402 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 NPR1P16066 1061 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 HSPA9P38646 679 aaKnown RBP12.89□□□□□ -0.35
LIMK1-202ENST00000418310 LMBR1Q8WVP7 490 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 C18orf8Q96DM3 657 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 CBWD1Q9BRT8 395 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 TMBIM4Q9HC24 238 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 GPRC5CQ9NQ84 441 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 PHF20L1A8MW92 1017 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 FOSP01100 380 aaPredicted RBP12.89□□□□□ -0.35
LIMK1-202ENST00000418310 MNAT1P51948 309 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 JAM2P57087 298 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 SP4Q02446 784 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 QPCTQ16769 361 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 C1orf186Q6ZWK4 172 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 ARHGEF19Q8IW93 802 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 CCDC26Q8TAB7 109 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 LRRC45Q96CN5 670 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 MBOAT7Q96N66 472 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 KIFC3Q9BVG8 833 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 EPN3Q9H201 632 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 TMEM59LQ9UK28 342 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 IGLV3-22A0A075B6J6 115 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 RAD17O75943 681 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 POLR2MP0CAP2 368 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 KCNJ1P48048 391 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 GTF2A1P52655 376 aaPredicted RBP12.89□□□□□ -0.35
LIMK1-202ENST00000418310 GRIPAP1Q4V328 841 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 C2CD6Q53TS8 623 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 ACTRT1Q8TDG2 376 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 HSD17B14Q9BPX1 270 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 PNMA2Q9UL42 364 aa12.89□□□□□ -0.35
LIMK1-202ENST00000418310 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
LIMK1-202ENST00000418310 SLC20A2Q08357 652 aa12.88□□□□□ -0.35
LIMK1-202ENST00000418310 CCDC38Q502W7 563 aa12.88□□□□□ -0.35
LIMK1-202ENST00000418310 ZC3H3Q8IXZ2 948 aaKnown RBP12.88□□□□□ -0.35
LIMK1-202ENST00000418310 PPM1KQ8N3J5 372 aa12.88□□□□□ -0.35
LIMK1-202ENST00000418310 RUBCNQ92622 972 aa12.88□□□□□ -0.35
LIMK1-202ENST00000418310 MKL1Q969V6 931 aa12.88□□□□□ -0.35
LIMK1-202ENST00000418310 FMO2Q99518 471 aa12.88□□□□□ -0.35
LIMK1-202ENST00000418310 HMGB1P1B2RPK0 211 aaPredicted RBP12.88□□□□□ -0.35
LIMK1-202ENST00000418310 FTLP02792 175 aaPredicted RBP12.88□□□□□ -0.35
LIMK1-202ENST00000418310 PRKCIP41743 596 aa12.88□□□□□ -0.35
LIMK1-202ENST00000418310 DR1Q01658 176 aa12.88□□□□□ -0.35
LIMK1-202ENST00000418310 EPC2Q52LR7 807 aa12.88□□□□□ -0.35
LIMK1-202ENST00000418310 DACT2Q5SW24 774 aa12.88□□□□□ -0.35
LIMK1-202ENST00000418310 ZNF720Q7Z2F6 126 aa12.88□□□□□ -0.35
LIMK1-202ENST00000418310 RFFLQ8WZ73 363 aa12.88□□□□□ -0.35
LIMK1-202ENST00000418310 APEX2Q9UBZ4 518 aa12.88□□□□□ -0.35
LIMK1-202ENST00000418310 SUGT1Q9Y2Z0 365 aa12.88□□□□□ -0.35
LIMK1-202ENST00000418310 HGSO14964 777 aaPredicted RBP12.87□□□□□ -0.35
LIMK1-202ENST00000418310 GUCY2CP25092 1073 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 ALDH1B1P30837 517 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 SSTR3P32745 418 aaPredicted RBP12.87□□□□□ -0.35
LIMK1-202ENST00000418310 PRELPP51888 382 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 C10orf76Q5T2E6 689 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 RPUSD2Q8IZ73 545 aaKnown RBP12.87□□□□□ -0.35
LIMK1-202ENST00000418310 SYCE1Q8N0S2 351 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 SAAL1Q96ER3 474 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 AGBL1Q96MI9 1066 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 POP1Q99575 1024 aaKnown RBP12.87□□□□□ -0.35
LIMK1-202ENST00000418310 TBX3O15119 743 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 CAND2O75155 1236 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 FGFR4P22455 802 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 IFNAR2P48551 515 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 MAP2K1Q02750 393 aaPredicted RBP12.87□□□□□ -0.35
LIMK1-202ENST00000418310 SF3B2Q13435 895 aaKnown RBP12.87□□□□□ -0.35
LIMK1-202ENST00000418310 CUL1Q13616 776 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 PODNQ7Z5L7 613 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 TMC3Q7Z5M5 1100 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 FBXO25Q8TCJ0 367 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 STK33Q9BYT3 514 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 SUCLA2Q9P2R7 463 aaPredicted RBP12.87□□□□□ -0.35
LIMK1-202ENST00000418310 TCRBV7S2A1N4TA0A589 114 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 IPO5O00410 1097 aaKnown RBP12.87□□□□□ -0.35
LIMK1-202ENST00000418310 SLC16A3O15427 465 aaKnown RBP12.87□□□□□ -0.35
LIMK1-202ENST00000418310 PSMD10O75832 226 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 VPS41P49754 854 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 SOX10P56693 466 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 PPP3CAQ08209 521 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 BFSP1Q12934 665 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 SPRED3Q2MJR0 410 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 CEP55Q53EZ4 464 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 IL31RAQ8NI17 732 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 POLR3CQ9BUI4 534 aaPredicted RBP12.87□□□□□ -0.35
LIMK1-202ENST00000418310 WDR11Q9BZH6 1224 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 USP20Q9Y2K6 914 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 DAAM1Q9Y4D1 1078 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 ALG6Q9Y672 507 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 PCNTO95613 3336 aa12.87□□□□□ -0.35
LIMK1-202ENST00000418310 LMNB1P20700 586 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 ADCY1Q08828 1119 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 SNX1Q13596 522 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 TRIP13Q15645 432 aaPredicted RBP12.86□□□□□ -0.35
LIMK1-202ENST00000418310 TATDN1Q6P1N9 297 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms