RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 IER5Q5VY09 327 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 LRRC8AQ8IWT6 810 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 NME8Q8N427 588 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 CCDC155Q8N6L0 562 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 KIF18AQ8NI77 898 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 DRC1Q96MC2 740 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 CTAGE1Q96RT6 745 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 RUSC1Q9BVN2 902 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 TRPV6Q9H1D0 765 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 XPNPEP1Q9NQW7 623 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 HOOK1Q9UJC3 728 aaKnown RBP16.03■□□□□ 0.16
SGCE-202ENST00000415788 ODF2LQ9ULJ1 636 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 ATP11BQ9Y2G3 1177 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 LOXHD1Q8IVV2 1947 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 TLE2Q04725 743 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 CNNM4Q6P4Q7 775 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 ELOA2Q8IYF1 753 aaPredicted RBP16.03■□□□□ 0.16
SGCE-202ENST00000415788 CAGE1Q8TC20 777 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 KIFAP3Q92845 792 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 BRCA2P51587 3418 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 KRT18P05783 430 aaKnown RBP16.02■□□□□ 0.16
SGCE-202ENST00000415788 MXD4Q14582 209 aaPredicted RBP16.02■□□□□ 0.16
SGCE-202ENST00000415788 STX1AQ16623 288 aa16.02■□□□□ 0.16
SGCE-202ENST00000415788 ARSHQ5FYA8 562 aa16.02■□□□□ 0.16
SGCE-202ENST00000415788 KIAA0319LQ8IZA0 1049 aa16.02■□□□□ 0.16
SGCE-202ENST00000415788 KRT222Q8N1A0 295 aa16.02■□□□□ 0.16
SGCE-202ENST00000415788 LRRC71Q8N4P6 559 aa16.02■□□□□ 0.16
SGCE-202ENST00000415788 PSPC1Q8WXF1 523 aaKnown RBP16.02■□□□□ 0.16
SGCE-202ENST00000415788 PAGE5Q96GU1 130 aa16.02■□□□□ 0.16
SGCE-202ENST00000415788 DNAJC25Q9H1X3 360 aa16.02■□□□□ 0.16
SGCE-202ENST00000415788 C17orf75Q9HAS0 396 aa16.02■□□□□ 0.16
SGCE-202ENST00000415788 KCNG1Q9UIX4 513 aa16.02■□□□□ 0.16
SGCE-202ENST00000415788 MYMKA6NI61 221 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 ASAP2O43150 1006 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 CLCN3P51790 818 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 RBL2Q08999 1139 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 IQCB1Q15051 598 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 PTPN14Q15678 1187 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 FAM102BQ5T8I3 360 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 RUFY4Q6ZNE9 571 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 NYAP1Q6ZVC0 841 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 DDX12PQ92771 950 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 ZBTB10Q96DT7 871 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 C7orf25Q9BPX7 421 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 TRIM9Q9C026 710 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 FAM49AQ9H0Q0 323 aaPredicted RBP16.01■□□□□ 0.15
SGCE-202ENST00000415788 SUCLA2Q9P2R7 463 aaPredicted RBP16.01■□□□□ 0.15
SGCE-202ENST00000415788 HIP1RO75146 1068 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 TBCAO75347 108 aaKnown RBP16.01■□□□□ 0.15
SGCE-202ENST00000415788 CLTBP09497 229 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 ARL2P36404 184 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 AFMP43652 599 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 FAAP100Q0VG06 881 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 MKRN4PQ13434 485 aaPredicted RBP16.01■□□□□ 0.15
SGCE-202ENST00000415788 BFSP2Q13515 415 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 SH3RF1Q7Z6J0 888 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 DNAJB3Q8WWF6 145 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 TMEM143Q96AN5 459 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 REEP2Q9BRK0 252 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 AKT3Q9Y243 479 aa16.01■□□□□ 0.15
SGCE-202ENST00000415788 M0QZ92 97 aa16■□□□□ 0.15
SGCE-202ENST00000415788 PITPNM1O00562 1244 aa16■□□□□ 0.15
SGCE-202ENST00000415788 TUBB4AP04350 444 aa16■□□□□ 0.15
SGCE-202ENST00000415788 GIT2Q14161 759 aa16■□□□□ 0.15
SGCE-202ENST00000415788 PPP2R5AQ15172 486 aa16■□□□□ 0.15
SGCE-202ENST00000415788 MAEAQ7L5Y9 396 aa16■□□□□ 0.15
SGCE-202ENST00000415788 POLR3FQ9H1D9 316 aaPredicted RBP16■□□□□ 0.15
SGCE-202ENST00000415788 FAM53CQ9NYF3 392 aa16■□□□□ 0.15
SGCE-202ENST00000415788 LARSQ9P2J5 1176 aaKnown RBP16■□□□□ 0.15
SGCE-202ENST00000415788 CCDC66A2RUB6 948 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 GTPBP6O43824 516 aaPredicted RBP15.99■□□□□ 0.15
SGCE-202ENST00000415788 GSDMDP57764 484 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 DRP2Q13474 957 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 TFDP1Q14186 410 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 DYMQ7RTS9 669 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 DHX38Q92620 1227 aaKnown RBP15.99■□□□□ 0.15
SGCE-202ENST00000415788 STAMQ92783 540 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 DNAJC19Q96DA6 116 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 IFT74Q96LB3 600 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 GPRC5CQ9NQ84 441 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 TMEM39AQ9NV64 488 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 TBX21Q9UL17 535 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 COL4A3BPQ9Y5P4 624 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 ARID2Q68CP9 1835 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 FAM13AO94988 1023 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 THPOP40225 353 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 ZNF131P52739 623 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 POU5F1BQ06416 359 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 RAD51AP2Q09MP3 1159 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 MAPK7Q13164 816 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 DMP1Q13316 513 aaPredicted RBP15.99■□□□□ 0.15
SGCE-202ENST00000415788 POSTNQ15063 836 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 TRIM71Q2Q1W2 868 aaKnown RBP15.99■□□□□ 0.15
SGCE-202ENST00000415788 ZNF410Q86VK4 478 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 RHPN2Q8IUC4 686 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 CCDC65Q8IXS2 484 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 DAW1Q8N136 415 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 PRPF31Q8WWY3 499 aaKnown RBP15.99■□□□□ 0.15
SGCE-202ENST00000415788 PARVGQ9HBI0 331 aa15.99■□□□□ 0.15
SGCE-202ENST00000415788 SEL1LQ9UBV2 794 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms