RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 TGFBRAP1Q8WUH2 860 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 EZH1Q92800 747 aaPredicted RBP6.92□□□□□ -1.3
NOD1-203ENST00000413433 COG3Q96JB2 828 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 ACAP3Q96P50 834 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 ELF4Q99607 663 aaPredicted RBP6.92□□□□□ -1.3
NOD1-203ENST00000413433 MYD88Q99836 296 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.92□□□□□ -1.3
NOD1-203ENST00000413433 ZDHHC5Q9C0B5 715 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 TRIT1Q9H3H1 467 aaKnown RBP6.92□□□□□ -1.3
NOD1-203ENST00000413433 KLHL11Q9NVR0 708 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 DNAJC28Q9NX36 388 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 GTF2IRD1Q9UHL9 959 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 DMTF1Q9Y222 760 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 TIMM13Q9Y5L4 95 aaPredicted RBP6.92□□□□□ -1.3
NOD1-203ENST00000413433 MAP3K19Q56UN5 1328 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 PNPLA7Q6ZV29 1317 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 A0A1W2PP64 1363 aa6.92□□□□□ -1.3
NOD1-203ENST00000413433 TRPM1Q7Z4N2 1603 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 RGPD5Q99666 1765 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 GNAT3A8MTJ3 354 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 ZNF561-AS1K7EIQ3 104 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 ALX3O95076 343 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 ZNF205O95201 554 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 TBC1D8O95759 1140 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 RHCEP18577 417 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 FSTP19883 344 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 ENDOUP21128 410 aaKnown RBP6.91□□□□□ -1.3
NOD1-203ENST00000413433 CD40P25942 277 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 HOXC9P31274 260 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 CD97P48960 835 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 JAM2P57087 298 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 RHDQ02161 417 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 TNK2Q07912 1038 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 SPIRE1Q08AE8 756 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 GALEQ14376 348 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 ZNF267Q14586 743 aaPredicted RBP6.91□□□□□ -1.3
NOD1-203ENST00000413433 LONRF1Q17RB8 773 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 WDR78Q5VTH9 848 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 B3GNT9Q6UX72 402 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.91□□□□□ -1.3
NOD1-203ENST00000413433 OSTM1Q86WC4 334 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 SMAP1Q8IYB5 467 aaPredicted RBP6.91□□□□□ -1.3
NOD1-203ENST00000413433 ZZZ3Q8IYH5 903 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 SSH1Q8WYL5 1049 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 MEGF10Q96KG7 1140 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 SCLT1Q96NL6 688 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 FAM193BQ96PV7 902 aaPredicted RBP6.91□□□□□ -1.3
NOD1-203ENST00000413433 CDADC1Q9BWV3 514 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 MS4A5Q9H3V2 200 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 SP110Q9HB58 689 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 ANAPC4Q9UJX5 808 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 CNTNAP4Q9C0A0 1308 aa6.91□□□□□ -1.3
NOD1-203ENST00000413433 MYOM1P52179 1685 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 CASZ1Q86V15 1759 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 SBF2Q86WG5 1849 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 FAM95CA0A1B0GW59 222 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 FAM155AB1AL88 458 aaPredicted RBP6.9□□□□□ -1.3
NOD1-203ENST00000413433 KCNK3O14649 394 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 TPP1O14773 563 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 LEFTY1O75610 366 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 FAM87AP0C7U9 286 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 POLD1P28340 1107 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 BCL6P41182 706 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 C1QTNF8P60827 252 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 SMAD3P84022 425 aaKnown RBP6.9□□□□□ -1.3
NOD1-203ENST00000413433 LMOD3Q0VAK6 560 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 NFKBIBQ15653 356 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 GPR19Q15760 415 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 SMAD2Q15796 467 aaKnown RBP6.9□□□□□ -1.3
NOD1-203ENST00000413433 CCDC149Q6ZUS6 474 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 CHST15Q7LFX5 561 aaPredicted RBP6.9□□□□□ -1.3
NOD1-203ENST00000413433 GRAMD1CQ8IYS0 662 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 CAMKK1Q8N5S9 505 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 JADE3Q92613 823 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 TMEM169Q96HH4 297 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 PTCHD1Q96NR3 888 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 TESK2Q96S53 571 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 MAP3K14Q99558 947 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 HERPUD2Q9BSE4 406 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 GPR62Q9BZJ7 368 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 AP5S1Q9NUS5 200 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 KCNG1Q9UIX4 513 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 CCNL1Q9UK58 526 aaPredicted RBP6.9□□□□□ -1.3
NOD1-203ENST00000413433 TCFL5Q9UL49 500 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 DNM3Q9UQ16 869 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 PCDHA11Q9Y5I1 949 aa6.9□□□□□ -1.3
NOD1-203ENST00000413433 EDC4Q6P2E9 1401 aaKnown RBP6.9□□□□□ -1.31
NOD1-203ENST00000413433 FYB1O15117 783 aa6.89□□□□□ -1.31
NOD1-203ENST00000413433 FGF10O15520 208 aaPredicted RBP6.89□□□□□ -1.31
NOD1-203ENST00000413433 NPHS1O60500 1241 aa6.89□□□□□ -1.31
NOD1-203ENST00000413433 FKTNO75072 461 aa6.89□□□□□ -1.31
NOD1-203ENST00000413433 MYBP10242 640 aa6.89□□□□□ -1.31
NOD1-203ENST00000413433 MAP4P27816 1152 aaKnown RBP6.89□□□□□ -1.31
NOD1-203ENST00000413433 USP14P54578 494 aa6.89□□□□□ -1.31
NOD1-203ENST00000413433 ADKP55263 362 aaKnown RBP6.89□□□□□ -1.31
NOD1-203ENST00000413433 UVSSAQ2YD98 709 aa6.89□□□□□ -1.31
NOD1-203ENST00000413433 RTP2Q5QGT7 225 aa6.89□□□□□ -1.31
NOD1-203ENST00000413433 MBLAC2Q68D91 279 aa6.89□□□□□ -1.31
NOD1-203ENST00000413433 PAOXQ6QHF9 649 aa6.89□□□□□ -1.31
NOD1-203ENST00000413433 HHIPL2Q6UWX4 724 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms