RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 HSP90AA4PQ58FG1 418 aa18.93■□□□□ 0.62
PTPRC-206ENST00000413409 TCP11X2Q5H9J9 407 aa18.93■□□□□ 0.62
PTPRC-206ENST00000413409 TTI2Q6NXR4 508 aa18.93■□□□□ 0.62
PTPRC-206ENST00000413409 ADHFE1Q8IWW8 467 aa18.93■□□□□ 0.62
PTPRC-206ENST00000413409 CCAR2Q8N163 923 aaKnown RBP18.93■□□□□ 0.62
PTPRC-206ENST00000413409 C17orf80Q9BSJ5 609 aa18.93■□□□□ 0.62
PTPRC-206ENST00000413409 PRKAG3Q9UGI9 489 aa18.93■□□□□ 0.62
PTPRC-206ENST00000413409 PTPRZ1P23471 2315 aaPredicted RBP18.92■□□□□ 0.62
PTPRC-206ENST00000413409 MYO15AQ9UKN7 3530 aa18.92■□□□□ 0.62
PTPRC-206ENST00000413409 MYMKA6NI61 221 aa18.92■□□□□ 0.62
PTPRC-206ENST00000413409 KCNJ18B7U540 433 aa18.92■□□□□ 0.62
PTPRC-206ENST00000413409 GCOM1H8Y6P7 765 aaPredicted RBP18.92■□□□□ 0.62
PTPRC-206ENST00000413409 KIF2AO00139 706 aaPredicted RBP18.92■□□□□ 0.62
PTPRC-206ENST00000413409 POLR2MP0CAP2 368 aa18.92■□□□□ 0.62
PTPRC-206ENST00000413409 CCT6AP40227 531 aaKnown RBP18.92■□□□□ 0.62
PTPRC-206ENST00000413409 COPB1P53618 953 aaKnown RBP18.92■□□□□ 0.62
PTPRC-206ENST00000413409 FOXK2Q01167 660 aa18.92■□□□□ 0.62
PTPRC-206ENST00000413409 KCNJ12Q14500 433 aa18.92■□□□□ 0.62
PTPRC-206ENST00000413409 KCTD17Q8N5Z5 321 aa18.92■□□□□ 0.62
PTPRC-206ENST00000413409 ERMNQ8TAM6 284 aa18.92■□□□□ 0.62
PTPRC-206ENST00000413409 P2RX5Q93086 422 aa18.92■□□□□ 0.62
PTPRC-206ENST00000413409 MTG1Q9BT17 334 aaPredicted RBP18.92■□□□□ 0.62
PTPRC-206ENST00000413409 RNF146Q9NTX7 359 aa18.92■□□□□ 0.62
PTPRC-206ENST00000413409 MUTYHQ9UIF7 546 aa18.92■□□□□ 0.62
PTPRC-206ENST00000413409 SIP14410 1827 aa18.92■□□□□ 0.62
PTPRC-206ENST00000413409 TRIP12Q14669 1992 aaPredicted RBP18.92■□□□□ 0.62
PTPRC-206ENST00000413409 PTPN5P54829 565 aa18.91■□□□□ 0.62
PTPRC-206ENST00000413409 EHHADHQ08426 723 aa18.91■□□□□ 0.62
PTPRC-206ENST00000413409 SPIRE1Q08AE8 756 aa18.91■□□□□ 0.62
PTPRC-206ENST00000413409 PSMD2Q13200 908 aa18.91■□□□□ 0.62
PTPRC-206ENST00000413409 TRIM14Q14142 442 aa18.91■□□□□ 0.62
PTPRC-206ENST00000413409 COL19A1Q14993 1142 aa18.91■□□□□ 0.62
PTPRC-206ENST00000413409 NYAP1Q6ZVC0 841 aa18.91■□□□□ 0.62
PTPRC-206ENST00000413409 FAM114A1Q8IWE2 563 aa18.91■□□□□ 0.62
PTPRC-206ENST00000413409 MORC4Q8TE76 937 aa18.91■□□□□ 0.62
PTPRC-206ENST00000413409 ALG13Q9NP73 1137 aaKnown RBP18.91■□□□□ 0.62
PTPRC-206ENST00000413409 VTA1Q9NP79 307 aa18.91■□□□□ 0.62
PTPRC-206ENST00000413409 PNMA2Q9UL42 364 aa18.91■□□□□ 0.62
PTPRC-206ENST00000413409 ARHGAP6O43182 974 aa18.9■□□□□ 0.62
PTPRC-206ENST00000413409 GHRHRQ02643 423 aa18.9■□□□□ 0.62
PTPRC-206ENST00000413409 BFSP2Q13515 415 aa18.9■□□□□ 0.62
PTPRC-206ENST00000413409 PRR16Q569H4 304 aa18.9■□□□□ 0.62
PTPRC-206ENST00000413409 HERC4Q5GLZ8 1057 aaPredicted RBP18.9■□□□□ 0.62
PTPRC-206ENST00000413409 FAM117BQ6P1L5 589 aa18.9■□□□□ 0.62
PTPRC-206ENST00000413409 NFRKBQ6P4R8 1299 aa18.9■□□□□ 0.62
PTPRC-206ENST00000413409 KCNK18Q7Z418 384 aa18.9■□□□□ 0.62
PTPRC-206ENST00000413409 TC2NQ8N9U0 490 aa18.9■□□□□ 0.62
PTPRC-206ENST00000413409 FBXO22Q8NEZ5 403 aa18.9■□□□□ 0.62
PTPRC-206ENST00000413409 MRPL38Q96DV4 380 aaKnown RBP18.9■□□□□ 0.62
PTPRC-206ENST00000413409 MYO7AQ13402 2215 aa18.9■□□□□ 0.62
PTPRC-206ENST00000413409 GFRA3O60609 400 aa18.89■□□□□ 0.61
PTPRC-206ENST00000413409 TUBB4AP04350 444 aa18.89■□□□□ 0.61
PTPRC-206ENST00000413409 ICAM1P05362 532 aa18.89■□□□□ 0.61
PTPRC-206ENST00000413409 MUM1L1Q5H9M0 696 aa18.89■□□□□ 0.61
PTPRC-206ENST00000413409 E4F1Q66K89 784 aaPredicted RBP18.89■□□□□ 0.61
PTPRC-206ENST00000413409 TMEM139Q8IV31 216 aa18.89■□□□□ 0.61
PTPRC-206ENST00000413409 GUF1Q8N442 669 aaKnown RBP18.89■□□□□ 0.61
PTPRC-206ENST00000413409 KIAA0895Q8NCT3 520 aa18.89■□□□□ 0.61
PTPRC-206ENST00000413409 PABPC5Q96DU9 382 aaKnown RBP18.89■□□□□ 0.61
PTPRC-206ENST00000413409 CCDC51Q96ER9 411 aa18.89■□□□□ 0.61
PTPRC-206ENST00000413409 TRERF1Q96PN7 1200 aa18.89■□□□□ 0.61
PTPRC-206ENST00000413409 PANX2Q96RD6 677 aa18.89■□□□□ 0.61
PTPRC-206ENST00000413409 WDR11Q9BZH6 1224 aa18.89■□□□□ 0.61
PTPRC-206ENST00000413409 FAM86C1Q9NVL1 165 aa18.89■□□□□ 0.61
PTPRC-206ENST00000413409 CYP39A1Q9NYL5 469 aa18.89■□□□□ 0.61
PTPRC-206ENST00000413409 VAV3Q9UKW4 847 aa18.89■□□□□ 0.61
PTPRC-206ENST00000413409 DCHS1Q96JQ0 3298 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 IGLV3-22A0A075B6J6 115 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 TRIM49BA6NDI0 452 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 LGALS16A8MUM7 142 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 AKR1B15C9JRZ8 316 aaPredicted RBP18.88■□□□□ 0.61
PTPRC-206ENST00000413409 FAM86B1E9PN63 330 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 N4BP3O15049 544 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 TEX33O43247 280 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 STX10O60499 249 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 NBNO60934 754 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 FAM86B2P0C5J1 330 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 HOXA13P31271 388 aaPredicted RBP18.88■□□□□ 0.61
PTPRC-206ENST00000413409 LTBRP36941 435 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 CPT1AP50416 773 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 STK4Q13043 487 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 ECM1Q16610 540 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 TCEAL5Q5H9L2 206 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 BMP8AQ7Z5Y6 402 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 IRF2BP1Q8IU81 584 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 SAMD3Q8N6K7 520 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 MYRIPQ8NFW9 859 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 DDX12PQ92771 950 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 C16orf45Q96MC5 204 aaPredicted RBP18.88■□□□□ 0.61
PTPRC-206ENST00000413409 DUSP9Q99956 384 aaKnown RBP18.88■□□□□ 0.61
PTPRC-206ENST00000413409 BMP2KQ9NSY1 1161 aaPredicted RBP18.88■□□□□ 0.61
PTPRC-206ENST00000413409 MAGEC2Q9UBF1 373 aaPredicted RBP18.88■□□□□ 0.61
PTPRC-206ENST00000413409 MAPK8IP1Q9UQF2 711 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.88■□□□□ 0.61
PTPRC-206ENST00000413409 LCTP09848 1927 aa18.88■□□□□ 0.61
PTPRC-206ENST00000413409 DMDP11532 3685 aa18.87■□□□□ 0.61
PTPRC-206ENST00000413409 MSH4O15457 936 aa18.87■□□□□ 0.61
PTPRC-206ENST00000413409 CXCL10P02778 98 aa18.87■□□□□ 0.61
PTPRC-206ENST00000413409 TPM1P09493 284 aa18.87■□□□□ 0.61
PTPRC-206ENST00000413409 FDX1P10109 184 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms