RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 ATL3Q6DD88 541 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 FOXD4L3Q6VB84 417 aaPredicted RBP14.63□□□□□ -0.07
HDAC8-210ENST00000412342 KRI1Q8N9T8 703 aaKnown RBP14.63□□□□□ -0.07
HDAC8-210ENST00000412342 BSNDQ8WZ55 320 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 SYMPKQ92797 1274 aaKnown RBP14.63□□□□□ -0.07
HDAC8-210ENST00000412342 TOP1MTQ969P6 601 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 CHAMP1Q96JM3 812 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 PLIN2Q99541 437 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 RUSC1Q9BVN2 902 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 GCOM2Q9BZD3 368 aaPredicted RBP14.63□□□□□ -0.07
HDAC8-210ENST00000412342 TTYH1Q9H313 450 aaPredicted RBP14.63□□□□□ -0.07
HDAC8-210ENST00000412342 MINDY3Q9H8M7 445 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 RC3H2Q9HBD1 1191 aaKnown RBP14.63□□□□□ -0.07
HDAC8-210ENST00000412342 BLOC1S4Q9NUP1 217 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 DNM3Q9UQ16 869 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 PCDHA11Q9Y5I1 949 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 ARHGEF15O94989 841 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 SRGAP2CP0DJJ0 459 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 PLCG1P19174 1290 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 SLC12A3P55017 1021 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 PTENP60484 403 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 HTRA4P83105 476 aaPredicted RBP14.62□□□□□ -0.07
HDAC8-210ENST00000412342 MAPK7Q13164 816 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 MXD4Q14582 209 aaPredicted RBP14.62□□□□□ -0.07
HDAC8-210ENST00000412342 ZRSR1Q15695 479 aaKnown RBP14.62□□□□□ -0.07
HDAC8-210ENST00000412342 RAB30Q15771 203 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 ODR4Q5SWX8 454 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 AXDND1Q5T1B0 1012 aaPredicted RBP14.62□□□□□ -0.07
HDAC8-210ENST00000412342 RINT1Q6NUQ1 792 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 C1orf186Q6ZWK4 172 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 MAEAQ7L5Y9 396 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 MYOCDQ8IZQ8 938 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 DAW1Q8N136 415 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 SYT2Q8N9I0 419 aaPredicted RBP14.62□□□□□ -0.07
HDAC8-210ENST00000412342 RNF149Q8NC42 400 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 SCLT1Q96NL6 688 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 NFKBIZQ9BYH8 718 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 RGS18Q9NS28 235 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 MYH11P35749 1972 aa14.62□□□□□ -0.07
HDAC8-210ENST00000412342 FNDC1Q4ZHG4 1894 aaPredicted RBP14.61□□□□□ -0.07
HDAC8-210ENST00000412342 TMEM265A0A087WTH1 108 aa14.61□□□□□ -0.07
HDAC8-210ENST00000412342 LCHNA4D1U4 455 aa14.61□□□□□ -0.07
HDAC8-210ENST00000412342 C9IYK1 514 aa14.61□□□□□ -0.07
HDAC8-210ENST00000412342 PLA2G4BP0C869 781 aa14.61□□□□□ -0.07
HDAC8-210ENST00000412342 NAALADL2Q58DX5 795 aa14.61□□□□□ -0.07
HDAC8-210ENST00000412342 FAM102BQ5T8I3 360 aa14.61□□□□□ -0.07
HDAC8-210ENST00000412342 CDCA2Q69YH5 1023 aaPredicted RBP14.61□□□□□ -0.07
HDAC8-210ENST00000412342 SRGAP1Q7Z6B7 1085 aa14.61□□□□□ -0.07
HDAC8-210ENST00000412342 SP7Q8TDD2 431 aaPredicted RBP14.61□□□□□ -0.07
HDAC8-210ENST00000412342 TIFAQ96CG3 184 aa14.61□□□□□ -0.07
HDAC8-210ENST00000412342 CALML4Q96GE6 196 aa14.61□□□□□ -0.07
HDAC8-210ENST00000412342 ADAM2Q99965 735 aa14.61□□□□□ -0.07
HDAC8-210ENST00000412342 NKX2-4Q9H2Z4 354 aa14.61□□□□□ -0.07
HDAC8-210ENST00000412342 DAXXQ9UER7 740 aaPredicted RBP14.61□□□□□ -0.07
HDAC8-210ENST00000412342 RCOR1Q9UKL0 485 aa14.61□□□□□ -0.07
HDAC8-210ENST00000412342 KIAA1671Q9BY89 1806 aa14.61□□□□□ -0.07
HDAC8-210ENST00000412342 CHD7Q9P2D1 2997 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 A0A087X0B3 334 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 CA3P07451 260 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 SFPQP23246 707 aaKnown RBP eCLIP14.6□□□□□ -0.07
HDAC8-210ENST00000412342 GUCY2CP25092 1073 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 PHKA2P46019 1235 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 FAM189BP81408 668 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 MBTD1Q05BQ5 628 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 AMHR2Q16671 573 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 ARSHQ5FYA8 562 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 FAM117BQ6P1L5 589 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 Q7L0L9 218 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 RAD54LQ92698 747 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 CDK5RAP3Q96JB5 506 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 INO80BQ9C086 356 aaPredicted RBP14.6□□□□□ -0.07
HDAC8-210ENST00000412342 POLD4Q9HCU8 107 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 AGPAT5Q9NUQ2 364 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 MSRAQ9UJ68 235 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 NLRC5Q86WI3 1866 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 ADGRA3Q8IWK6 1321 aa14.6□□□□□ -0.07
HDAC8-210ENST00000412342 RALGAPA2Q2PPJ7 1873 aa14.59□□□□□ -0.07
HDAC8-210ENST00000412342 COL4A4P53420 1690 aaPredicted RBP14.59□□□□□ -0.07
HDAC8-210ENST00000412342 TLL1O43897 1013 aa14.59□□□□□ -0.07
HDAC8-210ENST00000412342 CUTAO60888 179 aa14.59□□□□□ -0.07
HDAC8-210ENST00000412342 HOXA11P31270 313 aaPredicted RBP14.59□□□□□ -0.07
HDAC8-210ENST00000412342 SARSP49591 514 aaKnown RBP14.59□□□□□ -0.07
HDAC8-210ENST00000412342 TFDP1Q14186 410 aa14.59□□□□□ -0.07
HDAC8-210ENST00000412342 SHC4Q6S5L8 630 aa14.59□□□□□ -0.07
HDAC8-210ENST00000412342 SLC24A5Q71RS6 500 aa14.59□□□□□ -0.07
HDAC8-210ENST00000412342 SPRED2Q7Z698 418 aa14.59□□□□□ -0.07
HDAC8-210ENST00000412342 NPAS4Q8IUM7 802 aa14.59□□□□□ -0.07
HDAC8-210ENST00000412342 KCNG4Q8TDN1 519 aa14.59□□□□□ -0.07
HDAC8-210ENST00000412342 KIFAP3Q92845 792 aa14.59□□□□□ -0.07
HDAC8-210ENST00000412342 ZNF689Q96CS4 500 aaPredicted RBP14.59□□□□□ -0.07
HDAC8-210ENST00000412342 RAD9AQ99638 391 aa14.59□□□□□ -0.07
HDAC8-210ENST00000412342 TRAIPQ9BWF2 469 aa14.59□□□□□ -0.07
HDAC8-210ENST00000412342 CHST12Q9NRB3 414 aa14.59□□□□□ -0.07
HDAC8-210ENST00000412342 C1orf112Q9NSG2 853 aa14.59□□□□□ -0.07
HDAC8-210ENST00000412342 CFAP45Q9UL16 551 aa14.59□□□□□ -0.07
HDAC8-210ENST00000412342 PCDHA7Q9UN72 937 aa14.59□□□□□ -0.07
HDAC8-210ENST00000412342 DENND3A2RUS2 1198 aa14.58□□□□□ -0.08
HDAC8-210ENST00000412342 TSPAN1O60635 241 aa14.58□□□□□ -0.08
HDAC8-210ENST00000412342 HIP1RO75146 1068 aa14.58□□□□□ -0.08
HDAC8-210ENST00000412342 DGKIO75912 1065 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms