RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 EIF4A2Q14240 407 aaKnown RBP4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 DHX8Q14562 1220 aaKnown RBP4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 EMC4Q5J8M3 183 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 TAF3Q5VWG9 929 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 PRAMEF18Q5VWM3 479 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 FAM124AQ86V42 546 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 NME9Q86XW9 330 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 PDCL2Q8N4E4 241 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 CELF2-AS1Q8N7Q2 184 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 RUFY2Q8WXA3 655 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 KCTD13Q8WZ19 329 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 GPR20Q99678 358 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 MEIS3Q99687 375 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 IER2Q9BTL4 223 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 GTPBP4Q9BZE4 634 aaKnown RBP4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 TM6SF1Q9BZW5 370 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 EPB41L1Q9H4G0 881 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 KIF3AQ9Y496 699 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 NPFFR2Q9Y5X5 522 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 TSPOAP1O95153 1857 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 DIP2BQ9P265 1576 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 KDM3BQ7LBC6 1761 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 PHRF1Q9P1Y6 1649 aaKnown RBP4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 ANKARQ7Z5J8 1434 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 ELL2O00472 640 aaPredicted RBP4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 STX6O43752 255 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 DLX3O60479 287 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 MSCO60682 206 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 RAPGEF3O95398 923 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 LRG1P02750 347 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 CCDC192P0DO97 292 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 ZNF28P17035 718 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 FAM193AP78312 1265 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 ADAM17P78536 824 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 MAP4K2Q12851 820 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 PUM1Q14671 1186 aaKnown RBP eCLIP4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 NOLC1Q14978 699 aaKnown RBP eCLIP4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 VPS53Q5VIR6 699 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 SULT6B1Q6IMI4 303 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 BORAQ6PGQ7 559 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 TEPPQ6URK8 271 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 ANKS3Q6ZW76 656 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 TICAM2Q86XR7 235 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 CREBRFQ8IUR6 639 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 CNTROBQ8N137 903 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 OTUD7AQ8TE49 926 aaPredicted RBP4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 SSH3Q8TE77 659 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 GPATCH3Q96I76 525 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 LCORQ96JN0 433 aaPredicted RBP4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 TTC14Q96N46 770 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 FEZ1Q99689 392 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 JAM3Q9BX67 310 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 CDIP1Q9H305 208 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 SMPD4Q9NXE4 827 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 MYOTQ9UBF9 498 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 PPARGC1AQ9UBK2 798 aaKnown RBP4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 TSPYL4Q9UJ04 414 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 CROTQ9UKG9 612 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 LIMCH1Q9UPQ0 1083 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 WASF3Q9UPY6 502 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 IGSF1Q8N6C5 1336 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 METP08581 1390 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 RFX7Q2KHR2 1363 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 PLEKHG1Q9ULL1 1385 aa4.14□□□□□ -1.75
RNU6-55P-201ENST00000411092 NCAPD2Q15021 1401 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 PIK3C2AO00443 1686 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 LMO7Q8WWI1 1683 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 FAM83GA6ND36 823 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 CTIFO43310 598 aaKnown RBP4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 NEMFO60524 1076 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 MAFKO60675 156 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 GLRX3O76003 335 aaKnown RBP4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 ADCY5O95622 1261 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 CYP1A1P04798 512 aaPredicted RBP4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 UBTFL1P0CB47 393 aaPredicted RBP4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 KRT85P78386 507 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 DMTNQ08495 405 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 MTX1Q13505 466 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 ANKRD1Q15327 319 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 DDR2Q16832 855 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 DNTTIP2Q5QJE6 756 aaKnown RBP4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 USP53Q70EK8 1073 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 ERC1Q8IUD2 1116 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 C16orf71Q8IYS4 520 aaPredicted RBP4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 KIAA1524Q8TCG1 905 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 CHMP4CQ96CF2 233 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 KIF1BPQ96EK5 621 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 LOXL4Q96JB6 756 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 CLIC6Q96NY7 704 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 FUCA2Q9BTY2 467 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 SCAND2PQ9GZW5 306 aaPredicted RBP4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 ALDH8A1Q9H2A2 487 aaPredicted RBP4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 SMOC1Q9H4F8 434 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 L2HGDHQ9H9P8 463 aa4.13□□□□□ -1.75
RNU6-55P-201ENST00000411092 GPR27Q9NS67 375 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms