RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 DRC3Q9H069 523 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 HOMER3Q9NSC5 361 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 EXOC1LA0A1B0GW35 172 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 PNMA5Q96PV4 448 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 EEF1DP29692 281 aaKnown RBP8.97□□□□□ -0.97
SCN9A-203ENST00000409672 ALDH1A3P47895 512 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 RD3Q7Z3Z2 195 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 ABTB1Q969K4 478 aaPredicted RBP8.97□□□□□ -0.97
SCN9A-203ENST00000409672 SNX21Q969T3 373 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 COA1Q9GZY4 146 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 KLK14Q9P0G3 267 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 SETSIPP0DME0 302 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 GAP43P17677 238 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 IL6STP40189 918 aaPredicted RBP8.97□□□□□ -0.97
SCN9A-203ENST00000409672 FAM160B2Q86V87 743 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 RAB42Q8N4Z0 105 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 C10orf53Q8N6V4 93 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 GRAP2O75791 330 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 LRG1P02750 347 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 SF3B3Q15393 1217 aaKnown RBP8.97□□□□□ -0.97
SCN9A-203ENST00000409672 DHX38Q92620 1227 aaKnown RBP8.97□□□□□ -0.97
SCN9A-203ENST00000409672 RNF25Q96BH1 459 aaPredicted RBP8.97□□□□□ -0.97
SCN9A-203ENST00000409672 CUL1Q13616 776 aa8.96□□□□□ -0.97
SCN9A-203ENST00000409672 MEI1Q5TIA1 1274 aa8.96□□□□□ -0.97
SCN9A-203ENST00000409672 TRPV6Q9H1D0 765 aa8.96□□□□□ -0.97
SCN9A-203ENST00000409672 NPHP3-ACAD11A0A0J9YXS1 232 aa8.96□□□□□ -0.97
SCN9A-203ENST00000409672 PDCLQ13371 301 aa8.96□□□□□ -0.97
SCN9A-203ENST00000409672 ZC3H18Q86VM9 953 aaKnown RBP8.96□□□□□ -0.97
SCN9A-203ENST00000409672 GJB4Q9NTQ9 266 aa8.96□□□□□ -0.97
SCN9A-203ENST00000409672 PAPOLAP51003 745 aaKnown RBP8.96□□□□□ -0.97
SCN9A-203ENST00000409672 RAP1GDS1P52306 607 aa8.96□□□□□ -0.97
SCN9A-203ENST00000409672 IL9RQ01113 521 aa8.96□□□□□ -0.97
SCN9A-203ENST00000409672 TMEM161AQ9NX61 479 aa8.96□□□□□ -0.97
SCN9A-203ENST00000409672 PCDHA7Q9UN72 937 aa8.96□□□□□ -0.97
SCN9A-203ENST00000409672 EIF4E1BA6NMX2 242 aaKnown RBP8.96□□□□□ -0.97
SCN9A-203ENST00000409672 ADD2P35612 726 aa8.96□□□□□ -0.97
SCN9A-203ENST00000409672 TAF1BQ53T94 588 aaPredicted RBP8.96□□□□□ -0.97
SCN9A-203ENST00000409672 RNF149Q8NC42 400 aa8.96□□□□□ -0.97
SCN9A-203ENST00000409672 ERO1AQ96HE7 468 aa8.96□□□□□ -0.97
SCN9A-203ENST00000409672 EPN1Q9Y6I3 576 aaPredicted RBP8.96□□□□□ -0.97
SCN9A-203ENST00000409672 ECEL1O95672 775 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 SOAT1P35610 550 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 ANGPT1Q15389 498 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 ALFQ53S48 1182 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 TMEM143Q96AN5 459 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 SPACA7Q96KW9 195 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 FEM1BQ9UK73 627 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 GTF2A1LQ9UNN4 478 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 ACADMP11310 421 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 TAC1P20366 129 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 SULT1E1P49888 294 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 ANKRD20A4Q4UJ75 823 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 ANKRD20A8PQ5CZ79 823 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 GNASQ5JWF2 1037 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 ANKRD20A2Q5SQ80 823 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 ANKRD20A1Q5TYW2 823 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 SLC25A41Q8N5S1 370 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 ENOX1Q8TC92 643 aaKnown RBP8.96□□□□□ -0.98
SCN9A-203ENST00000409672 Q9H521 79 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 CCL15-CCL14A0A0B4J2E2 113 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 SLC16A1P53985 500 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 TUBB4BP68371 445 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 CCL15Q16663 113 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 ADCK5Q3MIX3 580 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 TMEM179Q6ZVK1 233 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 CEP95Q96GE4 821 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 NFKBIZQ9BYH8 718 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 SERPINI2O75830 405 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 YY1P25490 414 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 ANKS3Q6ZW76 656 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 ZNF614Q8N883 585 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 TTC8Q8TAM2 541 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 SH3TC2Q8TF17 1288 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 PNKPQ96T60 521 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 APOL5Q9BWW9 433 aa8.96□□□□□ -0.98
SCN9A-203ENST00000409672 ABI2Q9NYB9 513 aaPredicted RBP8.96□□□□□ -0.98
SCN9A-203ENST00000409672 TLR2O60603 784 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 FAM102AQ5T9C2 384 aaPredicted RBP8.95□□□□□ -0.98
SCN9A-203ENST00000409672 SLC35F6Q8N357 371 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 USP44Q9H0E7 712 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 POTEFA5A3E0 1075 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 IKBKBO14920 756 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 POTEIP0CG38 1075 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 THPOP40225 353 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 POTEGQ6S5H5 508 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 POTEEQ6S8J3 1075 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 SAYSD1Q9NPB0 183 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 PPP2R2CQ9Y2T4 447 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 SOWAHDA6NJG2 315 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 PJA2O43164 708 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 CCDC159P0C7I6 412 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 LMNB2Q03252 620 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 TAF11Q15544 211 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 RASIP1Q5U651 963 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 GIMAP8Q8ND71 665 aaPredicted RBP8.95□□□□□ -0.98
SCN9A-203ENST00000409672 ZNF274Q96GC6 653 aaPredicted RBP8.95□□□□□ -0.98
SCN9A-203ENST00000409672 ZFP42Q96MM3 310 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 GGA3Q9NZ52 723 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 IMPACTQ9P2X3 320 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 PEG3Q9GZU2 1588 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms