RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 SPZ1Q9BXG8 430 aa14.01□□□□□ -0.17
PTPRN-202ENST00000409251 GDF3Q9NR23 364 aa14.01□□□□□ -0.17
PTPRN-202ENST00000409251 AGAP1Q9UPQ3 857 aa14.01□□□□□ -0.17
PTPRN-202ENST00000409251 C15orf41Q9Y2V0 281 aa14.01□□□□□ -0.17
PTPRN-202ENST00000409251 RBAK-RBAKDNI3L0D1 243 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 SLC29A2Q14542 456 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 KRT25Q7Z3Z0 450 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 METTL13Q8N6R0 699 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 NLGN2Q8NFZ4 835 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 PYM1Q9BRP8 204 aaKnown RBP14□□□□□ -0.17
PTPRN-202ENST00000409251 ETNK1Q9HBU6 452 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 hCG_2014768A0A024R1R8 64 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 GRID2IPA4D2P6 1211 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 SPDYE2BA6NHP3 402 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 ZBTB5O15062 677 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 PEX10O60683 326 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 SPDYE6P0CI01 402 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 FECHP22830 423 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 POLD1P28340 1107 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 SP4Q02446 784 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 DALRD3Q5D0E6 543 aaKnown RBP14□□□□□ -0.17
PTPRN-202ENST00000409251 PDXDC1Q6P996 788 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 TATDN2Q93075 761 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 DDX25Q9UHL0 483 aaKnown RBP14□□□□□ -0.17
PTPRN-202ENST00000409251 NR2E1Q9Y466 385 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 MYH6P13533 1939 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 ADAMTSL1Q8N6G6 1762 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 PNMA6FA0A0J9YX94 578 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 KCNA3P22001 575 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 RASA3Q14644 834 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 LONRF1Q17RB8 773 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 ASPRV1Q53RT3 343 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 HP1BP3Q5SSJ5 553 aaPredicted RBP14□□□□□ -0.17
PTPRN-202ENST00000409251 UBAP2Q5T6F2 1119 aaKnown RBP14□□□□□ -0.17
PTPRN-202ENST00000409251 RDH13Q8NBN7 331 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 TSC22D3Q99576 134 aa14□□□□□ -0.17
PTPRN-202ENST00000409251 A0A1B0GUL6 1792 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 KLRC4O43908 158 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 HIP1RO75146 1068 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 RANBP1P43487 201 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 PLS1Q14651 629 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 ARHGAP44Q17R89 818 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 CCDC88AQ3V6T2 1871 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 ALKBH5Q6P6C2 394 aaKnown RBP13.99□□□□□ -0.17
PTPRN-202ENST00000409251 ELOA2Q8IYF1 753 aaPredicted RBP13.99□□□□□ -0.17
PTPRN-202ENST00000409251 ZNF483Q8TF39 744 aaPredicted RBP13.99□□□□□ -0.17
PTPRN-202ENST00000409251 PCDHB13Q9Y5F0 798 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 WNT10BO00744 389 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 RHOBTB3O94955 611 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 CTCFP49711 727 aaPredicted RBP13.99□□□□□ -0.17
PTPRN-202ENST00000409251 IRX1P78414 480 aaPredicted RBP13.99□□□□□ -0.17
PTPRN-202ENST00000409251 KCNK18Q7Z418 384 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 C4orf32Q8N8J7 132 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 TMEM237Q96Q45 408 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 TTYH3Q9C0H2 523 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 TAOK3Q9H2K8 898 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 BCAS3Q9H6U6 928 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 CASZ1Q86V15 1759 aa13.99□□□□□ -0.17
PTPRN-202ENST00000409251 E9PMD0 336 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 BMP3P12645 472 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 ANKS1AQ92625 1134 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 ZNF341Q9BYN7 854 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 NSRP1Q9H0G5 558 aaKnown RBP13.98□□□□□ -0.17
PTPRN-202ENST00000409251 MYMKA6NI61 221 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 SFI1A8K8P3 1242 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 GFPT2O94808 682 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 KRT16P08779 473 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 SLC9A1P19634 815 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 GJC1P36383 396 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 MRPL12P52815 198 aaKnown RBP13.98□□□□□ -0.17
PTPRN-202ENST00000409251 PTK2Q05397 1052 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 ARHGAP27Q6ZUM4 889 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 PURBQ96QR8 312 aaKnown RBP13.98□□□□□ -0.17
PTPRN-202ENST00000409251 RIOX1Q9H6W3 641 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 SERPINA10Q9UK55 444 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 CEP350Q5VT06 3117 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 GNAT1P11488 350 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 DRD4P21917 467 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 KCNJ1P48048 391 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 RAD23BP54727 409 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 WLSQ5T9L3 541 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 YTHDF3Q7Z739 585 aaKnown RBP13.98□□□□□ -0.17
PTPRN-202ENST00000409251 HOOK3Q86VS8 718 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 CCT6BQ92526 530 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 ISCUQ9H1K1 167 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 DHX36Q9H2U1 1008 aaKnown RBP13.98□□□□□ -0.17
PTPRN-202ENST00000409251 OSGEPQ9NPF4 335 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 TSKSQ9UJT2 592 aa13.98□□□□□ -0.17
PTPRN-202ENST00000409251 LRRN2O75325 713 aa13.97□□□□□ -0.17
PTPRN-202ENST00000409251 CREB1P16220 341 aa13.97□□□□□ -0.17
PTPRN-202ENST00000409251 CIAPIN1Q6FI81 312 aa13.97□□□□□ -0.17
PTPRN-202ENST00000409251 PHLDB2Q86SQ0 1253 aa13.97□□□□□ -0.17
PTPRN-202ENST00000409251 FBXO11Q86XK2 927 aa13.97□□□□□ -0.17
PTPRN-202ENST00000409251 CCDC105Q8IYK2 499 aa13.97□□□□□ -0.17
PTPRN-202ENST00000409251 FBXO25Q8TCJ0 367 aa13.97□□□□□ -0.17
PTPRN-202ENST00000409251 DDX12PQ92771 950 aa13.97□□□□□ -0.17
PTPRN-202ENST00000409251 ARHGEF2Q92974 986 aaKnown RBP13.97□□□□□ -0.17
PTPRN-202ENST00000409251 P2RX7Q99572 595 aaKnown RBP13.97□□□□□ -0.17
PTPRN-202ENST00000409251 LZTS2Q9BRK4 669 aa13.97□□□□□ -0.17
PTPRN-202ENST00000409251 PLCB1Q9NQ66 1216 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms