RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 RAB27AP51159 221 aa20.65■□□□□ 0.9
PTPN18-203ENST00000409022 UBE3AQ05086 875 aa20.65■□□□□ 0.9
PTPN18-203ENST00000409022 TFDP1Q14186 410 aa20.65■□□□□ 0.9
PTPN18-203ENST00000409022 MXD4Q14582 209 aaPredicted RBP20.65■□□□□ 0.9
PTPN18-203ENST00000409022 FAM102BQ5T8I3 360 aa20.65■□□□□ 0.9
PTPN18-203ENST00000409022 SRGAP1Q7Z6B7 1085 aa20.65■□□□□ 0.9
PTPN18-203ENST00000409022 ECHDC2Q86YB7 292 aa20.65■□□□□ 0.9
PTPN18-203ENST00000409022 LRRC43Q8N309 656 aa20.65■□□□□ 0.9
PTPN18-203ENST00000409022 RNF169Q8NCN4 708 aa20.65■□□□□ 0.9
PTPN18-203ENST00000409022 PRPF31Q8WWY3 499 aaKnown RBP20.65■□□□□ 0.9
PTPN18-203ENST00000409022 PIN4Q9Y237 131 aaKnown RBP20.65■□□□□ 0.9
PTPN18-203ENST00000409022 CARNS1A5YM72 827 aa20.64■□□□□ 0.89
PTPN18-203ENST00000409022 TNFRSF10AO00220 468 aa20.64■□□□□ 0.89
PTPN18-203ENST00000409022 GRM6O15303 877 aa20.64■□□□□ 0.89
PTPN18-203ENST00000409022 FGFR1P11362 822 aa20.64■□□□□ 0.89
PTPN18-203ENST00000409022 BMP1P13497 986 aa20.64■□□□□ 0.89
PTPN18-203ENST00000409022 GATMP50440 423 aa20.64■□□□□ 0.89
PTPN18-203ENST00000409022 NCBP1Q09161 790 aaKnown RBP20.64■□□□□ 0.89
PTPN18-203ENST00000409022 PCBP1Q15365 356 aaKnown RBP eCLIP20.64■□□□□ 0.89
PTPN18-203ENST00000409022 PUS10Q3MIT2 529 aaKnown RBP20.64■□□□□ 0.89
PTPN18-203ENST00000409022 TCEAL5Q5H9L2 206 aa20.64■□□□□ 0.89
PTPN18-203ENST00000409022 TTC38Q5R3I4 469 aa20.64■□□□□ 0.89
PTPN18-203ENST00000409022 TWF2Q6IBS0 349 aaKnown RBP20.64■□□□□ 0.89
PTPN18-203ENST00000409022 KLHL23Q8NBE8 558 aa20.64■□□□□ 0.89
PTPN18-203ENST00000409022 TMEM143Q96AN5 459 aa20.64■□□□□ 0.89
PTPN18-203ENST00000409022 TRAIPQ9BWF2 469 aa20.64■□□□□ 0.89
PTPN18-203ENST00000409022 MRPL9Q9BYD2 267 aaKnown RBP20.64■□□□□ 0.89
PTPN18-203ENST00000409022 TUFT1Q9NNX1 390 aa20.64■□□□□ 0.89
PTPN18-203ENST00000409022 ALG13Q9NP73 1137 aaKnown RBP20.64■□□□□ 0.89
PTPN18-203ENST00000409022 STK24Q9Y6E0 443 aa20.64■□□□□ 0.89
PTPN18-203ENST00000409022 EVPLQ92817 2033 aa20.63■□□□□ 0.89
PTPN18-203ENST00000409022 SRGAP2CP0DJJ0 459 aa20.63■□□□□ 0.89
PTPN18-203ENST00000409022 FGFR4P22455 802 aa20.63■□□□□ 0.89
PTPN18-203ENST00000409022 PHKA2P46019 1235 aa20.63■□□□□ 0.89
PTPN18-203ENST00000409022 LAMTOR4Q0VGL1 99 aa20.63■□□□□ 0.89
PTPN18-203ENST00000409022 ZNF174Q15697 407 aa20.63■□□□□ 0.89
PTPN18-203ENST00000409022 HAUS3Q68CZ6 603 aa20.63■□□□□ 0.89
PTPN18-203ENST00000409022 THNSL1Q8IYQ7 743 aa20.63■□□□□ 0.89
PTPN18-203ENST00000409022 PABPC5Q96DU9 382 aaKnown RBP20.63■□□□□ 0.89
PTPN18-203ENST00000409022 RAB34Q9BZG1 259 aa20.63■□□□□ 0.89
PTPN18-203ENST00000409022 TYW1Q9NV66 732 aaKnown RBP20.63■□□□□ 0.89
PTPN18-203ENST00000409022 FAM50BQ9Y247 325 aa20.63■□□□□ 0.89
PTPN18-203ENST00000409022 RALGAPA2Q2PPJ7 1873 aa20.62■□□□□ 0.89
PTPN18-203ENST00000409022 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.62■□□□□ 0.89
PTPN18-203ENST00000409022 POTEMA6NI47 508 aa20.62■□□□□ 0.89
PTPN18-203ENST00000409022 CSDE1O75534 798 aaKnown RBP20.62■□□□□ 0.89
PTPN18-203ENST00000409022 ITGB1P05556 798 aa20.62■□□□□ 0.89
PTPN18-203ENST00000409022 KCNA5P22460 613 aa20.62■□□□□ 0.89
PTPN18-203ENST00000409022 PPM1AP35813 382 aa20.62■□□□□ 0.89
PTPN18-203ENST00000409022 KCNQ1P51787 676 aa20.62■□□□□ 0.89
PTPN18-203ENST00000409022 LEXMQ3ZCV2 418 aa20.62■□□□□ 0.89
PTPN18-203ENST00000409022 EP400NLQ6ZTU2 488 aa20.62■□□□□ 0.89
PTPN18-203ENST00000409022 FERMT3Q86UX7 667 aa20.62■□□□□ 0.89
PTPN18-203ENST00000409022 KSR1Q8IVT5 923 aa20.62■□□□□ 0.89
PTPN18-203ENST00000409022 ZNF579Q8NAF0 562 aaKnown RBP20.62■□□□□ 0.89
PTPN18-203ENST00000409022 PGBD4Q96DM1 585 aa20.62■□□□□ 0.89
PTPN18-203ENST00000409022 NACC1Q96RE7 527 aa20.62■□□□□ 0.89
PTPN18-203ENST00000409022 TMEM60Q9H2L4 133 aa20.62■□□□□ 0.89
PTPN18-203ENST00000409022 BMP2KQ9NSY1 1161 aaPredicted RBP20.62■□□□□ 0.89
PTPN18-203ENST00000409022 PUF60Q9UHX1 559 aaKnown RBP20.62■□□□□ 0.89
PTPN18-203ENST00000409022 FSD2A1L4K1 749 aa20.61■□□□□ 0.89
PTPN18-203ENST00000409022 WNT7AO00755 349 aa20.61■□□□□ 0.89
PTPN18-203ENST00000409022 ERLIN2O94905 339 aa20.61■□□□□ 0.89
PTPN18-203ENST00000409022 U2AF2P26368 475 aaKnown RBP eCLIP20.61■□□□□ 0.89
PTPN18-203ENST00000409022 TECP42680 631 aa20.61■□□□□ 0.89
PTPN18-203ENST00000409022 PDE12Q6L8Q7 609 aaKnown RBP20.61■□□□□ 0.89
PTPN18-203ENST00000409022 RNF149Q8NC42 400 aa20.61■□□□□ 0.89
PTPN18-203ENST00000409022 SPPL3Q8TCT6 385 aa20.61■□□□□ 0.89
PTPN18-203ENST00000409022 POF1BQ8WVV4 589 aa20.61■□□□□ 0.89
PTPN18-203ENST00000409022 TMX3Q96JJ7 454 aa20.61■□□□□ 0.89
PTPN18-203ENST00000409022 POLR3CQ9BUI4 534 aaPredicted RBP20.61■□□□□ 0.89
PTPN18-203ENST00000409022 IFT122Q9HBG6 1241 aa20.61■□□□□ 0.89
PTPN18-203ENST00000409022 AGPAT5Q9NUQ2 364 aa20.61■□□□□ 0.89
PTPN18-203ENST00000409022 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.61■□□□□ 0.89
PTPN18-203ENST00000409022 TTC28Q96AY4 2481 aa20.61■□□□□ 0.89
PTPN18-203ENST00000409022 H3BQV1 296 aa20.6■□□□□ 0.89
PTPN18-203ENST00000409022 LAD1O00515 517 aa20.6■□□□□ 0.89
PTPN18-203ENST00000409022 MUTP22033 750 aa20.6■□□□□ 0.89
PTPN18-203ENST00000409022 RARRES1P49788 294 aa20.6■□□□□ 0.89
PTPN18-203ENST00000409022 KRT17Q04695 432 aa20.6■□□□□ 0.89
PTPN18-203ENST00000409022 POU5F1BQ06416 359 aa20.6■□□□□ 0.89
PTPN18-203ENST00000409022 GLB1LQ6UWU2 654 aa20.6■□□□□ 0.89
PTPN18-203ENST00000409022 COLGALT1Q8NBJ5 622 aa20.6■□□□□ 0.89
PTPN18-203ENST00000409022 MICAL1Q8TDZ2 1067 aa20.6■□□□□ 0.89
PTPN18-203ENST00000409022 ZNF558Q96NG5 402 aa20.6■□□□□ 0.89
PTPN18-203ENST00000409022 TBC1D32Q96NH3 1257 aa20.6■□□□□ 0.89
PTPN18-203ENST00000409022 CASD1Q96PB1 797 aa20.6■□□□□ 0.89
PTPN18-203ENST00000409022 FAM105AQ9NUU6 356 aa20.6■□□□□ 0.89
PTPN18-203ENST00000409022 CLDND1Q9NY35 253 aa20.6■□□□□ 0.89
PTPN18-203ENST00000409022 ZBTB39O15060 712 aa20.59■□□□□ 0.89
PTPN18-203ENST00000409022 FGF18O76093 207 aa20.59■□□□□ 0.89
PTPN18-203ENST00000409022 MCTP1Q6DN14 999 aa20.59■□□□□ 0.89
PTPN18-203ENST00000409022 ZNF598Q86UK7 904 aaKnown RBP20.59■□□□□ 0.89
PTPN18-203ENST00000409022 CATSPER3Q86XQ3 398 aa20.59■□□□□ 0.89
PTPN18-203ENST00000409022 MCPH1Q8NEM0 835 aa20.59■□□□□ 0.89
PTPN18-203ENST00000409022 PIGOQ8TEQ8 1089 aa20.59■□□□□ 0.89
PTPN18-203ENST00000409022 TLR9Q9NR96 1032 aa20.59■□□□□ 0.89
PTPN18-203ENST00000409022 DBR1Q9UK59 544 aaKnown RBP20.59■□□□□ 0.89
PTPN18-203ENST00000409022 LZTS1Q9Y250 596 aa20.59■□□□□ 0.89
PTPN18-203ENST00000409022 ZNF623O75123 536 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms