RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 HDAC6Q9UBN7 1215 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 SUFUQ9UMX1 484 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 PITPNM2Q9BZ72 1349 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 TEX33O43247 280 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 XPAP23025 273 aaPredicted RBP13.8□□□□□ -0.2
RNF43-201ENST00000407977 E4F1Q66K89 784 aaPredicted RBP13.8□□□□□ -0.2
RNF43-201ENST00000407977 NCLNQ969V3 563 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 TEX12Q9BXU0 123 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 MAGEB5Q9BZ81 275 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 SSU72P8A0A1W2PR75 194 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 ERVV-1B6SEH8 477 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 K7ERI5 159 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 CD58P19256 250 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 IL10P22301 178 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 JAK3P52333 1124 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 FLOT2Q14254 428 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 RABGAP1LQ5R372 815 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 USP17L2Q6R6M4 530 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 KIAA0825Q8IV33 1275 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 C3orf20Q8ND61 904 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 PAWRQ96IZ0 340 aaKnown RBP13.8□□□□□ -0.2
RNF43-201ENST00000407977 MOV10L1Q9BXT6 1211 aaKnown RBP13.8□□□□□ -0.2
RNF43-201ENST00000407977 A0A1B0GTH6 734 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 CDH16O75309 829 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 CYP2E1P05181 493 aaPredicted RBP13.8□□□□□ -0.2
RNF43-201ENST00000407977 SCNN1DP51172 638 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 MAP3K10Q02779 954 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 ZNF667Q5HYK9 610 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 MCPH1Q8NEM0 835 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 PAGR1Q9BTK6 254 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 MSTO1Q9BUK6 570 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 RPF1Q9H9Y2 349 aaKnown RBP13.8□□□□□ -0.2
RNF43-201ENST00000407977 DIAPH2O60879 1101 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 KRT14P02533 472 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 SOX5P35711 763 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 TAP1Q03518 808 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 TTC39CQ8N584 583 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 PPM1NQ8N819 430 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 NUP85Q9BW27 656 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 GOLGA8MH3BSY2 632 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 COASYQ13057 564 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 ALX1Q15699 326 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 LRRC8BQ6P9F7 803 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 HSPH1Q92598 858 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 VPS11Q9H270 941 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 NGRNQ9NPE2 291 aaKnown RBP13.79□□□□□ -0.2
RNF43-201ENST00000407977 CDK12Q9NYV4 1490 aaPredicted RBP13.79□□□□□ -0.2
RNF43-201ENST00000407977 NCK2O43639 380 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 PSMD7P51665 324 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 C7orf31Q8N865 590 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 ADA2Q9NZK5 511 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 UBAP1LF5GYI3 381 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 PLEKHA8P1O95397 391 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 SLC1A1P43005 524 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 PDIA2Q13087 525 aaKnown RBP13.79□□□□□ -0.2
RNF43-201ENST00000407977 KCTD2Q14681 263 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 CCDC24Q8N4L8 307 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 HEMGNQ9BXL5 484 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 ASPSCR1Q9BZE9 553 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 EPC1Q9H2F5 836 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 CORO7P57737 925 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 TTC8Q8TAM2 541 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 THAP11Q96EK4 314 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 LRRC1Q9BTT6 524 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 CHCHD3Q9NX63 227 aaKnown RBP13.79□□□□□ -0.2
RNF43-201ENST00000407977 AKT3Q9Y243 479 aa13.79□□□□□ -0.2
RNF43-201ENST00000407977 TCP10L2B9ZVM9 353 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 NFKBIAP25963 317 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 TSTA3Q13630 321 aaPredicted RBP13.78□□□□□ -0.2
RNF43-201ENST00000407977 CC2D2BQ6DHV5 1058 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 MB21D2Q8IYB1 491 aaPredicted RBP13.78□□□□□ -0.2
RNF43-201ENST00000407977 GTSE1Q9NYZ3 720 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 ADAMTS12P58397 1594 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 BICRAQ9NZM4 1560 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 HNRNPCL2B2RXH8 293 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 H0Y626 953 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 TRIM16O95361 564 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 SLC16A2P36021 539 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 GPS1Q13098 491 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 KIAA1755Q5JYT7 1200 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 IZUMO3Q5VZ72 239 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 FRMD5Q7Z6J6 570 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 SFR1Q86XK3 245 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 ATL2Q8NHH9 583 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 ROPN1BQ9BZX4 212 aaPredicted RBP13.78□□□□□ -0.2
RNF43-201ENST00000407977 RANBP17Q9H2T7 1088 aaKnown RBP13.78□□□□□ -0.2
RNF43-201ENST00000407977 KCNF1Q9H3M0 494 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 ROPN1Q9HAT0 212 aaPredicted RBP13.78□□□□□ -0.2
RNF43-201ENST00000407977 KLHL8Q9P2G9 620 aaPredicted RBP13.78□□□□□ -0.2
RNF43-201ENST00000407977 TMEM2Q9UHN6 1383 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 TCP11X1B4DZS4 312 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 FTLP02792 175 aaPredicted RBP13.78□□□□□ -0.2
RNF43-201ENST00000407977 SPOUT1Q5T280 376 aaKnown RBP13.78□□□□□ -0.2
RNF43-201ENST00000407977 NCAPG2Q86XI2 1143 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 ZBED8Q8IZ13 594 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 RYBPQ8N488 228 aaPredicted RBP13.78□□□□□ -0.2
RNF43-201ENST00000407977 PBXIP1Q96AQ6 731 aa13.78□□□□□ -0.2
RNF43-201ENST00000407977 RNPC3Q96LT9 517 aaKnown RBP13.78□□□□□ -0.2
RNF43-201ENST00000407977 XPO6Q96QU8 1125 aaKnown RBP13.78□□□□□ -0.2
RNF43-201ENST00000407977 UBN1Q9NPG3 1134 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms