RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 ACCSQ96QU6 501 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 PLCB1Q9NQ66 1216 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 FEM1BQ9UK73 627 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 TGFB1I1O43294 461 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 BIRC3Q13489 604 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 ASTE1Q2TB18 679 aaPredicted RBP12.89□□□□□ -0.35
PCNX4-204ENST00000406949 ZNF720Q7Z2F6 126 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 IRF2BP2Q7Z5L9 587 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 TPCN2Q8NHX9 752 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 RMDN3Q96TC7 470 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 CBWD1Q9BRT8 395 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 UBXN6Q9BZV1 441 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 PSD3Q9NYI0 1048 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 AJAP1Q9UKB5 411 aaPredicted RBP12.89□□□□□ -0.35
PCNX4-204ENST00000406949 ATP8A1Q9Y2Q0 1164 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 DDX3XO00571 662 aaKnown RBP eCLIP12.89□□□□□ -0.356e-7■■□□□ 14.3
PCNX4-204ENST00000406949 TTI1O43156 1089 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 ATMINO43313 823 aaPredicted RBP12.89□□□□□ -0.35
PCNX4-204ENST00000406949 BUB1BO60566 1050 aaPredicted RBP12.89□□□□□ -0.35
PCNX4-204ENST00000406949 ZBED4O75132 1171 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 ITGA4P13612 1032 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 BFSP1Q12934 665 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 RASA3Q14644 834 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 ALS2CLQ60I27 953 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 POMGNT1Q8WZA1 660 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 APEX2Q9UBZ4 518 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 PTPN22Q9Y2R2 807 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 RREB1Q92766 1687 aa12.89□□□□□ -0.35
PCNX4-204ENST00000406949 LCA5LO95447 670 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 P4HBP07237 508 aaKnown RBP12.88□□□□□ -0.35
PCNX4-204ENST00000406949 POLD1P28340 1107 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 INPP5BP32019 993 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 CIITAP33076 1130 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 VAMP7P51809 220 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 SEL1L2Q5TEA6 688 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 PRAMEF18Q5VWM3 479 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 LRRC31Q6UY01 552 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 C1orf186Q6ZWK4 172 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 MCF2L2Q86YR7 1114 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 HSD17B14Q9BPX1 270 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.88□□□□□ -0.35
PCNX4-204ENST00000406949 MXRA8Q9BRK3 442 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 OLFML3Q9NRN5 406 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 SEL1LQ9UBV2 794 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 FOXN3O00409 490 aaPredicted RBP12.88□□□□□ -0.35
PCNX4-204ENST00000406949 OPLAHO14841 1288 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 HNRNPDLO14979 420 aaKnown RBP12.88□□□□□ -0.35
PCNX4-204ENST00000406949 ONECUT3O60422 494 aaPredicted RBP12.88□□□□□ -0.35
PCNX4-204ENST00000406949 PSMD10O75832 226 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 FTLP02792 175 aaPredicted RBP12.88□□□□□ -0.35
PCNX4-204ENST00000406949 HOXD13P35453 343 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 QARSP47897 775 aaKnown RBP12.88□□□□□ -0.35
PCNX4-204ENST00000406949 DHX9Q08211 1270 aaKnown RBP12.88□□□□□ -0.35
PCNX4-204ENST00000406949 HAUS6Q7Z4H7 955 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 UBL4BQ8N7F7 174 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 PRPF38AQ8NAV1 312 aaKnown RBP12.88□□□□□ -0.35
PCNX4-204ENST00000406949 IL31RAQ8NI17 732 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 TRIM51Q9BSJ1 452 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 STK33Q9BYT3 514 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 F8VZ95 297 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 PLTPP55058 493 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 RPUSD2Q8IZ73 545 aaKnown RBP12.88□□□□□ -0.35
PCNX4-204ENST00000406949 XXYLT1Q8NBI6 393 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 FAM212AQ96EL1 285 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 CEP170P1Q96L14 293 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 SELENOSQ9BQE4 189 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 THAP2Q9H0W7 228 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 TAF1DQ9H5J8 278 aaPredicted RBP12.88□□□□□ -0.35
PCNX4-204ENST00000406949 LCMT1Q9UIC8 334 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 PCDHGC5Q9Y5F6 944 aa12.88□□□□□ -0.35
PCNX4-204ENST00000406949 DLEC1Q9Y238 1755 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 E7EVH7 732 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 PPFIA4O75335 1185 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 CAP2P40123 477 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 SPP2Q13103 211 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 DMP1Q13316 513 aaPredicted RBP12.87□□□□□ -0.35
PCNX4-204ENST00000406949 CCDC105Q8IYK2 499 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 RFFLQ8WZ73 363 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 IGLV3-22A0A075B6J6 115 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 EIF3DO15371 548 aaKnown RBP eCLIP12.87□□□□□ -0.35
PCNX4-204ENST00000406949 NR1D1P20393 614 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 RXRBP28702 533 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 LIG3P49916 1009 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 GUCY1A3Q02108 690 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 INTS8Q75QN2 995 aaKnown RBP12.87□□□□□ -0.35
PCNX4-204ENST00000406949 RTKN2Q8IZC4 609 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 WHAMMQ8TF30 809 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 SLC20A1Q8WUM9 679 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 TMEM206Q9H813 350 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 RASAL2Q9UJF2 1139 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 ZHX2Q9Y6X8 837 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 YWHABP31946 246 aaKnown RBP12.87□□□□□ -0.35
PCNX4-204ENST00000406949 VPS41P49754 854 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 MARSP56192 900 aaKnown RBP12.87□□□□□ -0.35
PCNX4-204ENST00000406949 SOX10P56693 466 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 DLG4P78352 724 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 MTMR2Q13614 643 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 PPP1R7Q15435 360 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 WDR78Q5VTH9 848 aa12.87□□□□□ -0.35
PCNX4-204ENST00000406949 RNF207Q6ZRF8 634 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms