RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 TSKSQ9UJT2 592 aa16.29■□□□□ 0.2
ATG4B-206ENST00000405546 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-206ENST00000405546 PCDHA2Q9Y5H9 948 aa16.29■□□□□ 0.2
ATG4B-206ENST00000405546 POLR2MP0CAP2 368 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 STAT1P42224 750 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 TNNC1P63316 161 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 ASTE1Q2TB18 679 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-206ENST00000405546 GLYCTKQ8IVS8 523 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 RNF217Q8TC41 542 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 ZNF577Q9BSK1 485 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 YIPF3Q9GZM5 350 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 ARHGEF10LQ9HCE6 1279 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 FRMD4BQ9Y2L6 1034 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 DAPK3O43293 454 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 CTNND1O60716 968 aaKnown RBP16.28■□□□□ 0.2
ATG4B-206ENST00000405546 SLCO1A2P46721 670 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 UAP1Q16222 522 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-206ENST00000405546 EDRF1Q3B7T1 1238 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 CC2D2BQ6DHV5 1058 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 RINT1Q6NUQ1 792 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 OGFOD1Q8N543 542 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 MGARPQ8TDB4 240 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 LBHD1Q9BQE6 289 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-206ENST00000405546 AMACRQ9UHK6 382 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 PNMA2Q9UL42 364 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 DLEC1Q9Y238 1755 aa16.28■□□□□ 0.2
ATG4B-206ENST00000405546 GRID2IPA4D2P6 1211 aa16.27■□□□□ 0.2
ATG4B-206ENST00000405546 A8MUI8 341 aa16.27■□□□□ 0.2
ATG4B-206ENST00000405546 POLD1P28340 1107 aa16.27■□□□□ 0.2
ATG4B-206ENST00000405546 DACT2Q5SW24 774 aa16.27■□□□□ 0.2
ATG4B-206ENST00000405546 C6orf89Q6UWU4 347 aa16.27■□□□□ 0.2
ATG4B-206ENST00000405546 TMBIM4Q9HC24 238 aa16.27■□□□□ 0.2
ATG4B-206ENST00000405546 TYW1Q9NV66 732 aaKnown RBP16.27■□□□□ 0.2
ATG4B-206ENST00000405546 ATP8A1Q9Y2Q0 1164 aa16.27■□□□□ 0.2
ATG4B-206ENST00000405546 DDX60LQ5H9U9 1706 aaKnown RBP16.27■□□□□ 0.2
ATG4B-206ENST00000405546 ARHGEF35A5YM69 484 aa16.27■□□□□ 0.2
ATG4B-206ENST00000405546 KRIT1O00522 736 aa16.27■□□□□ 0.2
ATG4B-206ENST00000405546 ITGA4P13612 1032 aa16.27■□□□□ 0.2
ATG4B-206ENST00000405546 ZNF844Q08AG5 666 aa16.27■□□□□ 0.2
ATG4B-206ENST00000405546 PPP4R3CPQ6ZMV5 832 aa16.27■□□□□ 0.2
ATG4B-206ENST00000405546 HOOK2Q96ED9 719 aa16.27■□□□□ 0.2
ATG4B-206ENST00000405546 ELAC2Q9BQ52 826 aaKnown RBP16.27■□□□□ 0.2
ATG4B-206ENST00000405546 MTFR1LQ9H019 292 aa16.27■□□□□ 0.2
ATG4B-206ENST00000405546 PARVGQ9HBI0 331 aa16.27■□□□□ 0.2
ATG4B-206ENST00000405546 CHORDC1Q9UHD1 332 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-206ENST00000405546 NAGPAQ9UK23 515 aa16.27■□□□□ 0.2
ATG4B-206ENST00000405546 UTRNP46939 3433 aa16.27■□□□□ 0.19
ATG4B-206ENST00000405546 PLIN4Q96Q06 1357 aa16.27■□□□□ 0.19
ATG4B-206ENST00000405546 PDXKO00764 312 aa16.27■□□□□ 0.19
ATG4B-206ENST00000405546 PJA2O43164 708 aa16.27■□□□□ 0.19
ATG4B-206ENST00000405546 PRLRP16471 622 aa16.27■□□□□ 0.19
ATG4B-206ENST00000405546 RRP1BQ14684 758 aaKnown RBP16.27■□□□□ 0.19
ATG4B-206ENST00000405546 FRMD5Q7Z6J6 570 aa16.27■□□□□ 0.19
ATG4B-206ENST00000405546 CTDP1Q9Y5B0 961 aaPredicted RBP16.27■□□□□ 0.19
ATG4B-206ENST00000405546 PITPNM2Q9BZ72 1349 aa16.26■□□□□ 0.19
ATG4B-206ENST00000405546 DIAPH2O60879 1101 aa16.26■□□□□ 0.19
ATG4B-206ENST00000405546 PSMC2P35998 433 aaKnown RBP16.26■□□□□ 0.19
ATG4B-206ENST00000405546 SREBF1P36956 1147 aa16.26■□□□□ 0.19
ATG4B-206ENST00000405546 DHX9Q08211 1270 aaKnown RBP16.26■□□□□ 0.19
ATG4B-206ENST00000405546 BYSLQ13895 437 aaKnown RBP16.26■□□□□ 0.19
ATG4B-206ENST00000405546 IFI16Q16666 785 aaKnown RBP16.26■□□□□ 0.19
ATG4B-206ENST00000405546 GKAP1Q5VSY0 366 aaPredicted RBP16.26■□□□□ 0.19
ATG4B-206ENST00000405546 MKL1Q969V6 931 aa16.26■□□□□ 0.19
ATG4B-206ENST00000405546 METTL14Q9HCE5 456 aaKnown RBP16.26■□□□□ 0.19
ATG4B-206ENST00000405546 GDF3Q9NR23 364 aa16.26■□□□□ 0.19
ATG4B-206ENST00000405546 HMGB1P1B2RPK0 211 aaPredicted RBP16.26■□□□□ 0.19
ATG4B-206ENST00000405546 LCA5LO95447 670 aa16.26■□□□□ 0.19
ATG4B-206ENST00000405546 VIMP08670 466 aaKnown RBP16.26■□□□□ 0.19
ATG4B-206ENST00000405546 SARNPP82979 210 aaKnown RBP16.26■□□□□ 0.19
ATG4B-206ENST00000405546 CCDC38Q502W7 563 aa16.26■□□□□ 0.19
ATG4B-206ENST00000405546 WLSQ5T9L3 541 aa16.26■□□□□ 0.19
ATG4B-206ENST00000405546 GANQ9H2C0 597 aa16.26■□□□□ 0.19
ATG4B-206ENST00000405546 A1CFQ9NQ94 594 aaKnown RBP16.26■□□□□ 0.19
ATG4B-206ENST00000405546 RREB1Q92766 1687 aa16.26■□□□□ 0.19
ATG4B-206ENST00000405546 SPATA31A6Q5VVP1 1343 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 WNK3Q9BYP7 1800 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 ATP6V1G2O95670 118 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 EYA4O95677 639 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 TNFAIP3P21580 790 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 HOXD13P35453 343 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 ELF3P78545 371 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-206ENST00000405546 DLGAP5Q15398 846 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 HYIQ5T013 277 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 TRIM68Q6AZZ1 485 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 SPATS2Q86XZ4 545 aaKnown RBP16.25■□□□□ 0.19
ATG4B-206ENST00000405546 RBM46Q8TBY0 533 aaKnown RBP16.25■□□□□ 0.19
ATG4B-206ENST00000405546 PARD3BQ8TEW8 1205 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 DNAJC12Q9UKB3 198 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 SP4Q02446 784 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 SPIRE1Q08AE8 756 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 IRF2BP2Q7Z5L9 587 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 LENG9Q96B70 501 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 RSRC1Q96IZ7 334 aaKnown RBP16.25■□□□□ 0.19
ATG4B-206ENST00000405546 AIPL1Q9NZN9 384 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 AJAP1Q9UKB5 411 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-206ENST00000405546 PPP1R12AO14974 1030 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-206ENST00000405546 TRAPPC3O43617 180 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 AP1G2O75843 785 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 SLITRK3O94933 977 aa16.25■□□□□ 0.19
ATG4B-206ENST00000405546 ARP10275 920 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms