RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 PITHD1Q9GZP4 211 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 NGRNQ9NPE2 291 aaKnown RBP5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 SAP30BPQ9UHR5 308 aaKnown RBP5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 LIMCH1Q9UPQ0 1083 aa5.06□□□□□ -1.6
HMGB1P17-201ENST00000403495 TEX51A0A1B0GUA7 166 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 PEX10O60683 326 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 PEX14O75381 377 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 MTHFD2P13995 350 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 IRAK1P51617 712 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 KCNQ1P51787 676 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 BCAR1P56945 870 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 GALEQ14376 348 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 STILQ15468 1287 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 ADRM1Q16186 407 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 C3orf36Q3SXR2 165 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 MINDY4Q4G0A6 757 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 LILRA6Q6PI73 481 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 B3GNT9Q6UX72 402 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 TMEFF1Q8IYR6 380 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 BCL6BQ8N143 479 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 Q8N3U1 123 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 CDYL2Q8N8U2 506 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 OR2I1PQ8NGU4 316 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 PPP1R35Q8TAP8 253 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 RIN2Q8WYP3 895 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 ZCCHC14Q8WYQ9 949 aaKnown RBP5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 KAT5Q92993 513 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 COA7Q96BR5 231 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 CSRNP2Q9H175 543 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 CHST12Q9NRB3 414 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 KCMF1Q9P0J7 381 aa5.05□□□□□ -1.6
HMGB1P17-201ENST00000403495 GOLGA6CA6NDK9 693 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 GOLGA6BA6NDN3 693 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 CCDC154A6NI56 674 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 A6NNZ2 444 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 OFD1O75665 1012 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 GOLGA6DP0CG33 693 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 COL6A1P12109 1028 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 HSPA6P17066 643 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 TAL1P17542 331 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 EDNRBP24530 442 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 SLC5A3P53794 718 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 ADKP55263 362 aaKnown RBP5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 NFATC3Q12968 1075 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 IL10RAQ13651 578 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 SSPNQ14714 243 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 GRAMD4Q6IC98 578 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 TRMT10BQ6PF06 316 aaKnown RBP5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 DGKHQ86XP1 1220 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 ADGRG2Q8IZP9 1017 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 KYQ8NBH2 561 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 GLB1L3Q8NCI6 653 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 ZBTB34Q8NCN2 500 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 RUNDC1Q96C34 613 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 DYDC2Q96IM9 177 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 AIFM3Q96NN9 605 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 TAAR9Q96RI9 348 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 WNT8AQ9H1J5 351 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 NMRK2Q9NPI5 230 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 GEMIN8Q9NWZ8 242 aaKnown RBP5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 GOLGA6AQ9NYA3 693 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 INTUQ9ULD6 942 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 FAM50BQ9Y247 325 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 PMF1-BGLAPU3KQ54 211 aa5.04□□□□□ -1.6
HMGB1P17-201ENST00000403495 FRMPD2Q68DX3 1309 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 ETV2O00321 342 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 HTRA2O43464 458 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 CAND2O75155 1236 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 KNG1P01042 644 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 KRT18P05783 430 aaKnown RBP5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 POU2F2P09086 479 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 GSPT1P15170 499 aaKnown RBP5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 JUNBP17275 347 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 PDCP20941 246 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 DLG4P78352 724 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 CD69Q07108 199 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 PPP3CAQ08209 521 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 MALLQ13021 153 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 GTF2H3Q13889 308 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 NOMO1Q15155 1222 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 LLGL1Q15334 1064 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 DGKDQ16760 1214 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 SYCP2LQ5T4T6 812 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 PPP4R4Q6NUP7 873 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 COL23A1Q86Y22 540 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 CCAR1Q8IX12 1150 aaKnown RBP5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 NUDT10Q8NFP7 164 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 SLC35G2Q8TBE7 412 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 DIS3LQ8TF46 1054 aaKnown RBP5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 KCNN1Q92952 543 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 NUDT11Q96G61 164 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 HIST1H2AHQ96KK5 128 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 NUP88Q99567 741 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 ACO2Q99798 780 aaKnown RBP5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 HIST1H2AJQ99878 128 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 ARNT2Q9HBZ2 717 aa5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 EPB41L4AQ9HCS5 686 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 POLR3BQ9NW08 1133 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 SPATA6Q9NWH7 488 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P17-201ENST00000403495 SYNPO2Q9UMS6 1093 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms