RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 PRPF4BQ13523 1007 aaKnown RBP15.3■□□□□ 0.04
ATG3-202ENST00000402314 EXOC3L4Q17RC7 722 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 Q4G0T1 1027 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 RINT1Q6NUQ1 792 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 DPY19L2P1Q6NXN4 242 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 IRF2BP2Q7Z5L9 587 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 SPATS2Q86XZ4 545 aaKnown RBP15.3■□□□□ 0.04
ATG3-202ENST00000402314 MYCT1Q8N699 235 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 IGLV3-22A0A075B6J6 115 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 PPIP5K2O43314 1243 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 TRAPPC3O43617 180 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 XRCC5P13010 732 aaKnown RBP15.3■□□□□ 0.04
ATG3-202ENST00000402314 SLCO1A2P46721 670 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 DHX9Q08211 1270 aaKnown RBP15.3■□□□□ 0.04
ATG3-202ENST00000402314 NAB2Q15742 525 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 GMCL1Q96IK5 515 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 TAF1DQ9H5J8 278 aaPredicted RBP15.3■□□□□ 0.04
ATG3-202ENST00000402314 COL11A2P13942 1736 aaPredicted RBP15.3■□□□□ 0.04
ATG3-202ENST00000402314 NRXN2Q9P2S2 1712 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 GRID2IPA4D2P6 1211 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 GNA14O95837 355 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 AFPP02771 609 aaKnown RBP15.3■□□□□ 0.04
ATG3-202ENST00000402314 PRLRP16471 622 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 CCNHP51946 323 aaPredicted RBP15.3■□□□□ 0.04
ATG3-202ENST00000402314 EPM2AIP1Q7L775 607 aaPredicted RBP15.3■□□□□ 0.04
ATG3-202ENST00000402314 NSMCE1Q8WV22 266 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 NAP1L4Q99733 375 aaKnown RBP15.3■□□□□ 0.04
ATG3-202ENST00000402314 PDGFDQ9GZP0 370 aaPredicted RBP15.3■□□□□ 0.04
ATG3-202ENST00000402314 GLT8D2Q9H1C3 349 aa15.3■□□□□ 0.04
ATG3-202ENST00000402314 PITPNM2Q9BZ72 1349 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 TTI1O43156 1089 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 SART1O43290 800 aaKnown RBP15.29■□□□□ 0.04
ATG3-202ENST00000402314 TGFB1I1O43294 461 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 SLITRK3O94933 977 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 ARP10275 920 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 MARSP56192 900 aaKnown RBP15.29■□□□□ 0.04
ATG3-202ENST00000402314 DGKZQ13574 1117 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 EDRF1Q3B7T1 1238 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 GKAP1Q5VSY0 366 aaPredicted RBP15.29■□□□□ 0.04
ATG3-202ENST00000402314 YTHDF3Q7Z739 585 aaKnown RBP15.29■□□□□ 0.04
ATG3-202ENST00000402314 GMCL1P1Q8NEA9 526 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 PRCCQ92733 491 aaPredicted RBP15.29■□□□□ 0.04
ATG3-202ENST00000402314 TRIM51Q9BSJ1 452 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 NOD2Q9HC29 1040 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 SERPINA10Q9UK55 444 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 SLX4Q8IY92 1834 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 RBAK-RBAKDNI3L0D1 243 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 TRIM49P0CI25 452 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 TRIM49CP0CI26 452 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 CYP2J2P51589 502 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 STAT2P52630 851 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 PPP2R2AP63151 447 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 LLGL1Q15334 1064 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 SLC35C1Q96A29 364 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 EDEM3Q9BZQ6 932 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 MLXIPLQ9NP71 852 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 A1CFQ9NQ94 594 aaKnown RBP15.29■□□□□ 0.04
ATG3-202ENST00000402314 GCNT4Q9P109 453 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 SLC12A6Q9UHW9 1150 aa15.29■□□□□ 0.04
ATG3-202ENST00000402314 GREB1LQ9C091 1923 aaPredicted RBP15.29■□□□□ 0.04
ATG3-202ENST00000402314 ENO4A6NNW6 628 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 TISP43B9A030 160 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 LRRN2O75325 713 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 CCDC38Q502W7 563 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 UBAP2Q5T6F2 1119 aaKnown RBP15.28■□□□□ 0.04
ATG3-202ENST00000402314 KIF2BQ8N4N8 673 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 USP38Q8NB14 1042 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 ELAC2Q9BQ52 826 aaKnown RBP15.28■□□□□ 0.04
ATG3-202ENST00000402314 TRIM6Q9C030 488 aaPredicted RBP15.28■□□□□ 0.04
ATG3-202ENST00000402314 AIPL1Q9NZN9 384 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 TRAF3IP3Q9Y228 551 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 A6NNZ2 444 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 GFPT2O94808 682 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 FAM13AO94988 1023 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 GCKP35557 465 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 ITIH3Q06033 890 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 RPS6KA1Q15418 735 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 TUBB8Q3ZCM7 444 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 GLE1Q53GS7 698 aaKnown RBP15.28■□□□□ 0.04
ATG3-202ENST00000402314 WLSQ5T9L3 541 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 OTOP1Q7RTM1 612 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 TAX1BP1Q86VP1 789 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 MGARPQ8TDB4 240 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 WHAMMQ8TF30 809 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 FAM20AQ96MK3 541 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 INPP4AQ96PE3 977 aaPredicted RBP15.28■□□□□ 0.04
ATG3-202ENST00000402314 TMEM39BQ9GZU3 492 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 STK38LQ9Y2H1 464 aa15.28■□□□□ 0.04
ATG3-202ENST00000402314 KRIT1O00522 736 aa15.27■□□□□ 0.04
ATG3-202ENST00000402314 VIMP08670 466 aaKnown RBP15.27■□□□□ 0.04
ATG3-202ENST00000402314 ECHS1P30084 290 aa15.27■□□□□ 0.04
ATG3-202ENST00000402314 TNNC1P63316 161 aa15.27■□□□□ 0.04
ATG3-202ENST00000402314 EPHA7Q15375 998 aa15.27■□□□□ 0.04
ATG3-202ENST00000402314 CC2D2BQ6DHV5 1058 aa15.27■□□□□ 0.04
ATG3-202ENST00000402314 ZNF572Q7Z3I7 529 aaPredicted RBP15.27■□□□□ 0.04
ATG3-202ENST00000402314 ARFGAP2Q8N6H7 521 aa15.27■□□□□ 0.04
ATG3-202ENST00000402314 SPDL1Q96EA4 605 aa15.27■□□□□ 0.04
ATG3-202ENST00000402314 HSD17B14Q9BPX1 270 aa15.27■□□□□ 0.04
ATG3-202ENST00000402314 FAM167BQ9BTA0 163 aa15.27■□□□□ 0.04
ATG3-202ENST00000402314 A8MUI8 341 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms