RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 PPP1R13BQ96KQ4 1090 aa28.09■■■□□ 2.09
CPNE1-205ENST00000401607 MMRN2Q9H8L6 949 aa28.09■■■□□ 2.09
CPNE1-205ENST00000401607 FAM207AQ9NSI2 230 aaPredicted RBP28.09■■■□□ 2.09
CPNE1-205ENST00000401607 DENND3A2RUS2 1198 aa28.09■■■□□ 2.09
CPNE1-205ENST00000401607 RFC5P40937 340 aa28.09■■■□□ 2.09
CPNE1-205ENST00000401607 C17orf99Q6UX52 265 aa28.09■■■□□ 2.09
CPNE1-205ENST00000401607 TOGARAM2Q6ZUX3 1019 aa28.09■■■□□ 2.09
CPNE1-205ENST00000401607 SLC35C1Q96A29 364 aa28.09■■■□□ 2.09
CPNE1-205ENST00000401607 TMEM143Q96AN5 459 aa28.09■■■□□ 2.09
CPNE1-205ENST00000401607 CGNQ9P2M7 1197 aaKnown RBP28.09■■■□□ 2.09
CPNE1-205ENST00000401607 AFPP02771 609 aaKnown RBP28.08■■■□□ 2.09
CPNE1-205ENST00000401607 MARK3P27448 753 aa28.08■■■□□ 2.09
CPNE1-205ENST00000401607 ADCYAP1R1P41586 468 aa28.08■■■□□ 2.09
CPNE1-205ENST00000401607 INHBEP58166 350 aa28.08■■■□□ 2.09
CPNE1-205ENST00000401607 ZBED6P86452 979 aa28.08■■■□□ 2.09
CPNE1-205ENST00000401607 MORN1Q5T089 497 aa28.08■■■□□ 2.09
CPNE1-205ENST00000401607 SLC7A3Q8WY07 619 aa28.08■■■□□ 2.09
CPNE1-205ENST00000401607 BBXQ8WY36 941 aaPredicted RBP28.08■■■□□ 2.09
CPNE1-205ENST00000401607 C16orf45Q96MC5 204 aaPredicted RBP28.08■■■□□ 2.09
CPNE1-205ENST00000401607 KIF3CO14782 793 aa28.07■■■□□ 2.08
CPNE1-205ENST00000401607 ARL2P36404 184 aa28.07■■■□□ 2.08
CPNE1-205ENST00000401607 SNRPFP62306 86 aaKnown RBP28.07■■■□□ 2.08
CPNE1-205ENST00000401607 DCAF17Q5H9S7 520 aaPredicted RBP28.07■■■□□ 2.08
CPNE1-205ENST00000401607 NYAP1Q6ZVC0 841 aa28.07■■■□□ 2.08
CPNE1-205ENST00000401607 TMTC1Q8IUR5 882 aa28.07■■■□□ 2.08
CPNE1-205ENST00000401607 ATP8B4Q8TF62 1192 aa28.07■■■□□ 2.08
CPNE1-205ENST00000401607 IFT74Q96LB3 600 aa28.07■■■□□ 2.08
CPNE1-205ENST00000401607 CBWD1Q9BRT8 395 aa28.07■■■□□ 2.08
CPNE1-205ENST00000401607 TINF2Q9BSI4 451 aa28.07■■■□□ 2.08
CPNE1-205ENST00000401607 GPBP1L1Q9HC44 474 aaPredicted RBP28.07■■■□□ 2.08
CPNE1-205ENST00000401607 TLR2O60603 784 aa28.06■■■□□ 2.08
CPNE1-205ENST00000401607 LAMC2Q13753 1193 aa28.06■■■□□ 2.08
CPNE1-205ENST00000401607 PLCB4Q15147 1175 aa28.06■■■□□ 2.08
CPNE1-205ENST00000401607 DNTTIP2Q5QJE6 756 aaKnown RBP28.06■■■□□ 2.08
CPNE1-205ENST00000401607 WDR59Q6PJI9 974 aa28.06■■■□□ 2.08
CPNE1-205ENST00000401607 ASAP3Q8TDY4 903 aa28.06■■■□□ 2.08
CPNE1-205ENST00000401607 ARHGAP28Q9P2N2 729 aa28.06■■■□□ 2.08
CPNE1-205ENST00000401607 EXOC7Q9UPT5 735 aa28.06■■■□□ 2.08
CPNE1-205ENST00000401607 FRMD4BQ9Y2L6 1034 aa28.06■■■□□ 2.08
CPNE1-205ENST00000401607 ECM2O94769 699 aaPredicted RBP28.06■■■□□ 2.08
CPNE1-205ENST00000401607 GH1P01241 217 aa28.06■■■□□ 2.08
CPNE1-205ENST00000401607 PPP2R2CQ9Y2T4 447 aa28.06■■■□□ 2.08
CPNE1-205ENST00000401607 PPME1Q9Y570 386 aa28.06■■■□□ 2.08
CPNE1-205ENST00000401607 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.05■■■□□ 2.08
CPNE1-205ENST00000401607 ZBTB42B2RXF5 422 aa28.05■■■□□ 2.08
CPNE1-205ENST00000401607 EXOC3O60645 756 aa28.05■■■□□ 2.08
CPNE1-205ENST00000401607 MAFO75444 373 aaPredicted RBP28.05■■■□□ 2.08
CPNE1-205ENST00000401607 GLRA2P23416 452 aa28.05■■■□□ 2.08
CPNE1-205ENST00000401607 TCERG1LQ5VWI1 586 aa28.05■■■□□ 2.08
CPNE1-205ENST00000401607 CYP26C1Q6V0L0 522 aa28.05■■■□□ 2.08
CPNE1-205ENST00000401607 TAS1R3Q7RTX0 852 aa28.05■■■□□ 2.08
CPNE1-205ENST00000401607 NEK11Q8NG66 645 aa28.05■■■□□ 2.08
CPNE1-205ENST00000401607 CRACR2AQ9BSW2 395 aa28.05■■■□□ 2.08
CPNE1-205ENST00000401607 SMARCAD1Q9H4L7 1026 aa28.05■■■□□ 2.08
CPNE1-205ENST00000401607 PCIF1Q9H4Z3 704 aa28.05■■■□□ 2.08
CPNE1-205ENST00000401607 ANKRD63C9JTQ0 380 aa28.04■■■□□ 2.08
CPNE1-205ENST00000401607 NOL4O94818 638 aa28.04■■■□□ 2.08
CPNE1-205ENST00000401607 MAP2K5Q13163 448 aa28.04■■■□□ 2.08
CPNE1-205ENST00000401607 MEA1Q16626 185 aa28.04■■■□□ 2.08
CPNE1-205ENST00000401607 REXO1L1PQ8IX06 675 aa28.04■■■□□ 2.08
CPNE1-205ENST00000401607 KCNN1Q92952 543 aa28.04■■■□□ 2.08
CPNE1-205ENST00000401607 CCDC102AQ96A19 550 aa28.04■■■□□ 2.08
CPNE1-205ENST00000401607 EMID1Q96A84 441 aaPredicted RBP28.04■■■□□ 2.08
CPNE1-205ENST00000401607 CHP1Q99653 195 aa28.04■■■□□ 2.08
CPNE1-205ENST00000401607 DESI2Q9BSY9 194 aa28.04■■■□□ 2.08
CPNE1-205ENST00000401607 LSM14BQ9BX40 385 aaKnown RBP28.04■■■□□ 2.08
CPNE1-205ENST00000401607 CCP110O43303 1012 aa28.04■■■□□ 2.08
CPNE1-205ENST00000401607 SLC26A2P50443 739 aa28.04■■■□□ 2.08
CPNE1-205ENST00000401607 ABHD16BQ9H3Z7 469 aa28.04■■■□□ 2.08
CPNE1-205ENST00000401607 SLC5A4Q9NY91 659 aa28.04■■■□□ 2.08
CPNE1-205ENST00000401607 HSPBP1Q9NZL4 362 aa28.04■■■□□ 2.08
CPNE1-205ENST00000401607 ABT1Q9ULW3 272 aaKnown RBP28.04■■■□□ 2.08
CPNE1-205ENST00000401607 ACVR2BQ13705 512 aa28.03■■■□□ 2.08
CPNE1-205ENST00000401607 SLC39A4Q6P5W5 647 aa28.03■■■□□ 2.08
CPNE1-205ENST00000401607 MSL3Q8N5Y2 521 aaKnown RBP28.03■■■□□ 2.08
CPNE1-205ENST00000401607 SMC1BQ8NDV3 1235 aa28.03■■■□□ 2.08
CPNE1-205ENST00000401607 ZNF397Q8NF99 534 aaPredicted RBP28.03■■■□□ 2.08
CPNE1-205ENST00000401607 BAP1Q92560 729 aa28.03■■■□□ 2.08
CPNE1-205ENST00000401607 EDEM3Q9BZQ6 932 aa28.03■■■□□ 2.08
CPNE1-205ENST00000401607 KCNG1Q9UIX4 513 aa28.03■■■□□ 2.08
CPNE1-205ENST00000401607 SIP14410 1827 aa28.02■■■□□ 2.08
CPNE1-205ENST00000401607 H0YCG3 227 aa28.02■■■□□ 2.08
CPNE1-205ENST00000401607 ADSSP30520 456 aa28.02■■■□□ 2.08
CPNE1-205ENST00000401607 NAMPTP43490 491 aa28.02■■■□□ 2.08
CPNE1-205ENST00000401607 SREBF2Q12772 1141 aa28.02■■■□□ 2.08
CPNE1-205ENST00000401607 DPY19L2P1Q6NXN4 242 aa28.02■■■□□ 2.08
CPNE1-205ENST00000401607 ZSWIM2Q8NEG5 633 aa28.02■■■□□ 2.08
CPNE1-205ENST00000401607 PPTC7Q8NI37 304 aa28.02■■■□□ 2.08
CPNE1-205ENST00000401607 ZIC5Q96T25 663 aa28.02■■■□□ 2.08
CPNE1-205ENST00000401607 ZFYVE28Q9HCC9 887 aa28.02■■■□□ 2.08
CPNE1-205ENST00000401607 ZSCAN12O43309 604 aa28.01■■■□□ 2.08
CPNE1-205ENST00000401607 TNNT1P13805 278 aa28.01■■■□□ 2.08
CPNE1-205ENST00000401607 SMPD1P17405 629 aa28.01■■■□□ 2.08
CPNE1-205ENST00000401607 CNGA1P29973 690 aa28.01■■■□□ 2.08
CPNE1-205ENST00000401607 APBA1Q02410 837 aa28.01■■■□□ 2.08
CPNE1-205ENST00000401607 DRP2Q13474 957 aa28.01■■■□□ 2.08
CPNE1-205ENST00000401607 PPP2R5AQ15172 486 aa28.01■■■□□ 2.08
CPNE1-205ENST00000401607 TSR1Q2NL82 804 aaKnown RBP28.01■■■□□ 2.08
CPNE1-205ENST00000401607 XXYLT1Q8NBI6 393 aa28.01■■■□□ 2.08
CPNE1-205ENST00000401607 RDH13Q8NBN7 331 aa28.01■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms