RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 BMT2Q1RMZ1 405 aa8.34□□□□□ -1.08
USP16-204ENST00000399976 FAM109BQ6ICB4 259 aaPredicted RBP8.34□□□□□ -1.08
USP16-204ENST00000399976 ENGASEQ8NFI3 743 aa8.34□□□□□ -1.08
USP16-204ENST00000399976 SPATA20Q8TB22 786 aa8.34□□□□□ -1.08
USP16-204ENST00000399976 GJA10Q969M2 543 aa8.34□□□□□ -1.08
USP16-204ENST00000399976 IFT74Q96LB3 600 aa8.34□□□□□ -1.08
USP16-204ENST00000399976 BHMT2Q9H2M3 363 aa8.34□□□□□ -1.08
USP16-204ENST00000399976 IFT122Q9HBG6 1241 aa8.34□□□□□ -1.08
USP16-204ENST00000399976 BMP2KQ9NSY1 1161 aaPredicted RBP8.34□□□□□ -1.08
USP16-204ENST00000399976 LARSQ9P2J5 1176 aaKnown RBP8.34□□□□□ -1.08
USP16-204ENST00000399976 HOOK1Q9UJC3 728 aaKnown RBP8.34□□□□□ -1.08
USP16-204ENST00000399976 KCNH3Q9ULD8 1083 aa8.34□□□□□ -1.08
USP16-204ENST00000399976 COL4A4P53420 1690 aaPredicted RBP8.33□□□□□ -1.08
USP16-204ENST00000399976 HOXA2O43364 376 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 PPP1R37O75864 691 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 MARK3P27448 753 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 STAT6P42226 847 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 SMAD3P84022 425 aaKnown RBP8.33□□□□□ -1.08
USP16-204ENST00000399976 SP4Q02446 784 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 CYP4A11Q02928 519 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 CT47A1Q5JQC4 288 aaPredicted RBP8.33□□□□□ -1.08
USP16-204ENST00000399976 ZPBP2Q6X784 338 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 ZBTB8OSQ8IWT0 167 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 SP7Q8TDD2 431 aaPredicted RBP8.33□□□□□ -1.08
USP16-204ENST00000399976 DPF3Q92784 378 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 DNAJC19Q96DA6 116 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 UBN1Q9NPG3 1134 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 RGS18Q9NS28 235 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 AGPAT5Q9NUQ2 364 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 DACT1Q9NYF0 836 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 TBC1D7Q9P0N9 293 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 STK39Q9UEW8 545 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 CITO14578 2027 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 NBNO60934 754 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 EOMESO95936 686 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 GLRA2P23416 452 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 PAX3P23760 479 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 THPOP40225 353 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 GTF2BQ00403 316 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 GRIN1Q05586 938 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 GIT2Q14161 759 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 MYBPC2Q14324 1141 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 MBTPS1Q14703 1052 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 ARSHQ5FYA8 562 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 TMEM240Q5SV17 173 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 NT5DC1Q5TFE4 455 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 STXBP4Q6ZWJ1 553 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 MRPL10Q7Z7H8 261 aaKnown RBP8.33□□□□□ -1.08
USP16-204ENST00000399976 FMR1NBQ8N0W7 255 aaPredicted RBP8.33□□□□□ -1.08
USP16-204ENST00000399976 DNAJB3Q8WWF6 145 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 WNT8BQ93098 351 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 SAMD11Q96NU1 681 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 FTOQ9C0B1 505 aaKnown RBP eCLIP8.33□□□□□ -1.08
USP16-204ENST00000399976 STYXL1Q9Y6J8 313 aa8.33□□□□□ -1.08
USP16-204ENST00000399976 GTPBP6O43824 516 aaPredicted RBP8.32□□□□□ -1.08
USP16-204ENST00000399976 DTNBO60941 627 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 PFKFB1P16118 471 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 MARCKSP29966 332 aaPredicted RBP8.32□□□□□ -1.08
USP16-204ENST00000399976 ATN1P54259 1190 aaPredicted RBP8.32□□□□□ -1.08
USP16-204ENST00000399976 MBTD1Q05BQ5 628 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 CAPSQ13938 189 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 PLA2G4FQ68DD2 849 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 FAM173BQ6P4H8 233 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 UNC13DQ70J99 1090 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 KCNK18Q7Z418 384 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 DAW1Q8N136 415 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 EPSTI1Q96J88 318 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 POLR3FQ9H1D9 316 aaPredicted RBP8.32□□□□□ -1.08
USP16-204ENST00000399976 PARVGQ9HBI0 331 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 PP2D1A8MPX8 630 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 N4BP3O15049 544 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 ADRB2P07550 413 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 PROZP22891 400 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 MAGEA10P43363 369 aaPredicted RBP8.32□□□□□ -1.08
USP16-204ENST00000399976 SARSP49591 514 aaKnown RBP8.32□□□□□ -1.08
USP16-204ENST00000399976 SMTNP53814 917 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 DMP1Q13316 513 aaPredicted RBP8.32□□□□□ -1.08
USP16-204ENST00000399976 IKBKEQ14164 716 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 KARSQ15046 597 aaKnown RBP8.32□□□□□ -1.08
USP16-204ENST00000399976 AMHR2Q16671 573 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 DCAF4L1Q3SXM0 396 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 NPAS4Q8IUM7 802 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 C12orf56Q8IXR9 622 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 CEP57L1Q8IYX8 460 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 TRIM9Q9C026 710 aa8.32□□□□□ -1.08
USP16-204ENST00000399976 RC3H2Q9HBD1 1191 aaKnown RBP8.32□□□□□ -1.08
USP16-204ENST00000399976 E9PMD0 336 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 ACKR2O00590 384 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 SYKP43405 635 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 NPEPPSP55786 919 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 HTRA4P83105 476 aaPredicted RBP8.31□□□□□ -1.08
USP16-204ENST00000399976 PAK2Q13177 524 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 CCDC65Q8IXS2 484 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 TRIML1Q8N9V2 468 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 LRRC15Q8TF66 581 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 PRPF31Q8WWY3 499 aaKnown RBP8.31□□□□□ -1.08
USP16-204ENST00000399976 BADQ92934 168 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 CLIC6Q96NY7 704 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 FIZ1Q96SL8 496 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 RUSC1Q9BVN2 902 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms