RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 PTCD1O75127 700 aaKnown RBP9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 TUBA3EQ6PEY2 450 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 PCYOX1LQ8NBM8 494 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 EME1Q96AY2 570 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 PRKD2Q9BZL6 878 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 KIAA1755Q5JYT7 1200 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 AIF1LQ9BQI0 150 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 EXOSC4Q9NPD3 245 aaKnown RBP9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 ZNF638Q14966 1978 aaKnown RBP9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 RSBN1Q5VWQ0 802 aaPredicted RBP9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 SCYL2Q6P3W7 929 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 ADI1Q9BV57 179 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 FSD1LQ9BXM9 530 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 ANO3Q9BYT9 981 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 AURKCQ9UQB9 309 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 PSMD11O00231 422 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 PDCD6IPQ8WUM4 868 aaKnown RBP9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 SH3KBP1Q96B97 665 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 NSFL1CQ9UNZ2 370 aaKnown RBP9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 PDE4DIPQ5VU43 2346 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 EIF2B2P49770 351 aaKnown RBP9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 GPR141Q7Z602 305 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 ITGADQ13349 1161 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 FAM47EQ6ZV65 393 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 NUDT18Q6ZVK8 323 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 INPP5DQ92835 1189 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 GRAMD1AQ96CP6 724 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 MRPL47Q9HD33 250 aaKnown RBP9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 ECHDC1Q9NTX5 307 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 SEMA3DO95025 777 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 NR1D1P20393 614 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 CASP4P49662 377 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 GAL3ST3Q96A11 431 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 ZBTB21Q9ULJ3 1066 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 FIS1Q9Y3D6 152 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 FARP1Q9Y4F1 1045 aaPredicted RBP9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 SNX9Q9Y5X1 595 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 EXOSC10Q01780 885 aaKnown RBP9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 HIC1Q14526 733 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 KMOO15229 486 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 SASH1O94885 1247 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 BMP2KLQ5H9B9 411 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 GALNT18Q6P9A2 607 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 C2CD5Q86YS7 1000 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 HES6Q96HZ4 224 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 GGA1Q9UJY5 639 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 PLCL2Q9UPR0 1127 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 TRIM66O15016 1216 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 HADHAP40939 763 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 PRR23BQ6ZRT6 265 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 GANCQ8TET4 914 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 EFCAB1Q9HAE3 211 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 ADAM21Q9UKJ8 722 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 ABCC11Q96J66 1382 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 MEI4A8MW99 385 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 PARNO95453 639 aaKnown RBP9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 MLNP12872 115 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 PPP2R5BQ15173 497 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 SPATA16Q9BXB7 569 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 PCDHB13Q9Y5F0 798 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 CCT8L1PA6NM43 557 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 PSTPIP1O43586 416 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 CCNT1O60563 726 aaKnown RBP9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 PPP6R2O75170 966 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 ANO4Q32M45 955 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 TMA7Q9Y2S6 64 aaKnown RBP9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 F8W810 466 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 PRPF4O43172 522 aaKnown RBP eCLIP9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 ULK1O75385 1050 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 TMOD1P28289 359 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 IFNAR2P48551 515 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 ORC2Q13416 577 aaPredicted RBP9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 E2F4Q16254 413 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 ARL10Q8N8L6 244 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 PPP1R36Q96LQ0 422 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 METTL14Q9HCE5 456 aaKnown RBP9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 DTNAQ9Y4J8 743 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 KIAA0100Q14667 2235 aaKnown RBP9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 RB1P06400 928 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 FASTKD5Q7L8L6 764 aaKnown RBP9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 TCP11L2Q8N4U5 519 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 EPN2O95208 641 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 PRKAR2BP31323 418 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 QARSP47897 775 aaKnown RBP9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 ZBED8Q8IZ13 594 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 FTOQ9C0B1 505 aaKnown RBP eCLIP9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 RHBDL2Q9NX52 303 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 KLHL3Q9UH77 587 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 CNPY2Q9Y2B0 182 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 CHRNA3P32297 505 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 CENPAP49450 140 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 SARSP49591 514 aaKnown RBP9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 RGS7P49802 495 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 YWHAZP63104 245 aaKnown RBP9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 NEK9Q8TD19 979 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 SLC9A7Q96T83 725 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 TRMT6Q9UJA5 497 aaKnown RBP9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 TMCO1Q9UM00 188 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 MYO1FO00160 1098 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 PRODHO43272 600 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms