RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 HIDE1A8MVS5 230 aa12.5□□□□□ -0.41
SRMP1-201ENST00000398959 SFPQP23246 707 aaKnown RBP eCLIP12.5□□□□□ -0.41
SRMP1-201ENST00000398959 CYP3A7P24462 503 aa12.5□□□□□ -0.41
SRMP1-201ENST00000398959 DRP2Q13474 957 aa12.5□□□□□ -0.41
SRMP1-201ENST00000398959 SMC1AQ14683 1233 aaKnown RBP12.5□□□□□ -0.41
SRMP1-201ENST00000398959 BMS1Q14692 1282 aaKnown RBP12.5□□□□□ -0.41
SRMP1-201ENST00000398959 CBX2Q14781 532 aaPredicted RBP12.5□□□□□ -0.41
SRMP1-201ENST00000398959 NONOQ15233 471 aaKnown RBP eCLIP12.5□□□□□ -0.41
SRMP1-201ENST00000398959 TARBP2Q15633 366 aaKnown RBP12.5□□□□□ -0.41
SRMP1-201ENST00000398959 TWF2Q6IBS0 349 aaKnown RBP12.5□□□□□ -0.41
SRMP1-201ENST00000398959 GALNT17Q6IS24 598 aa12.5□□□□□ -0.41
SRMP1-201ENST00000398959 ANKRD54Q6NXT1 300 aa12.5□□□□□ -0.41
SRMP1-201ENST00000398959 TMEM184AQ6ZMB5 413 aa12.5□□□□□ -0.41
SRMP1-201ENST00000398959 ALYREFQ86V81 257 aaKnown RBP12.5□□□□□ -0.41
SRMP1-201ENST00000398959 RHPN2Q8IUC4 686 aa12.5□□□□□ -0.41
SRMP1-201ENST00000398959 DAGLBQ8NCG7 672 aa12.5□□□□□ -0.41
SRMP1-201ENST00000398959 SUSD6Q92537 303 aa12.5□□□□□ -0.41
SRMP1-201ENST00000398959 FBXL18Q96ME1 805 aa12.5□□□□□ -0.41
SRMP1-201ENST00000398959 SH2D3AQ9BRG2 576 aa12.5□□□□□ -0.41
SRMP1-201ENST00000398959 APOL5Q9BWW9 433 aa12.5□□□□□ -0.41
SRMP1-201ENST00000398959 SLKQ9H2G2 1235 aaPredicted RBP12.5□□□□□ -0.41
SRMP1-201ENST00000398959 CHST12Q9NRB3 414 aa12.5□□□□□ -0.41
SRMP1-201ENST00000398959 DDX25Q9UHL0 483 aaKnown RBP12.5□□□□□ -0.41
SRMP1-201ENST00000398959 PLXNA3P51805 1871 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 A0A087WZ62 844 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 TMEM221A6NGB7 291 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 M0R296 226 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 EPB41L2O43491 1005 aaKnown RBP12.49□□□□□ -0.41
SRMP1-201ENST00000398959 ALDH7A1P49419 539 aaKnown RBP12.49□□□□□ -0.41
SRMP1-201ENST00000398959 ZXDAP98168 799 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 NHLH1Q02575 133 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 KCNC3Q14003 757 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 INF2Q27J81 1249 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 MOXD1Q6UVY6 613 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 TRIM67Q6ZTA4 783 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 KRT25Q7Z3Z0 450 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 ZNF598Q86UK7 904 aaKnown RBP12.49□□□□□ -0.41
SRMP1-201ENST00000398959 ZNF410Q86VK4 478 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 FAM177A1Q8N128 213 aaPredicted RBP12.49□□□□□ -0.41
SRMP1-201ENST00000398959 SLC39A11Q8N1S5 342 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 ETNPPLQ8TBG4 499 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 PBXIP1Q96AQ6 731 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 TMEM169Q96HH4 297 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 AIFM3Q96NN9 605 aa12.49□□□□□ -0.41
SRMP1-201ENST00000398959 FDXACB1Q9BRP7 624 aaPredicted RBP12.49□□□□□ -0.41
SRMP1-201ENST00000398959 INO80BQ9C086 356 aaPredicted RBP12.49□□□□□ -0.41
SRMP1-201ENST00000398959 SUCLA2Q9P2R7 463 aaPredicted RBP12.49□□□□□ -0.41
SRMP1-201ENST00000398959 PIN4Q9Y237 131 aaKnown RBP12.49□□□□□ -0.41
SRMP1-201ENST00000398959 IGKV6-21A0A0C4DH24 114 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 CCDC194A0A1B0GVG4 234 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 NT5C1B-RDH14C9J2C7 533 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 M0R2N6 131 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 ZC3H11AO75152 810 aaKnown RBP eCLIP12.48□□□□□ -0.41
SRMP1-201ENST00000398959 MAFO75444 373 aaPredicted RBP12.48□□□□□ -0.41
SRMP1-201ENST00000398959 CDKL5O76039 1030 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 SKIP12755 728 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 HOXB8P17481 243 aaPredicted RBP12.48□□□□□ -0.41
SRMP1-201ENST00000398959 SP100P23497 879 aaPredicted RBP12.48□□□□□ -0.41
SRMP1-201ENST00000398959 PHKA2P46019 1235 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 BCAR1P56945 870 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 PSMC5P62195 406 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 LETM2Q2VYF4 491 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 LONRF3Q496Y0 759 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 TPRNQ4KMQ1 711 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 PLA2G4FQ68DD2 849 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 B3GNT9Q6UX72 402 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 CATSPER4Q7RTX7 472 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 ZBTB33Q86T24 672 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 SUGP1Q8IWZ8 645 aaKnown RBP12.48□□□□□ -0.41
SRMP1-201ENST00000398959 TMEM87AQ8NBN3 555 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 CASP10Q92851 521 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 NLRP4Q96MN2 994 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 MBOAT7Q96N66 472 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 CEP89Q96ST8 783 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 JPH2Q9BR39 696 aaPredicted RBP12.48□□□□□ -0.41
SRMP1-201ENST00000398959 TM6SF1Q9BZW5 370 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 S1PR5Q9H228 398 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 PDRG1Q9NUG6 133 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 KCNJ14Q9UNX9 436 aa12.48□□□□□ -0.41
SRMP1-201ENST00000398959 C2orf71A6NGG8 1288 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 SLC37A4O43826 429 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 DKC1O60832 514 aaKnown RBP eCLIP12.47□□□□□ -0.41
SRMP1-201ENST00000398959 STBD1O95210 358 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 XBP1P17861 261 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 MRE11P49959 708 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 RAB27AP51159 221 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 RNASELQ05823 741 aaKnown RBP12.47□□□□□ -0.41
SRMP1-201ENST00000398959 NPY5RQ15761 445 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 CES5AQ6NT32 575 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 SYCE2Q6PIF2 218 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 GLB1LQ6UWU2 654 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 ANO5Q75V66 913 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 BMP8AQ7Z5Y6 402 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 KSR1Q8IVT5 923 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 MRPL43Q8N983 215 aaKnown RBP12.47□□□□□ -0.41
SRMP1-201ENST00000398959 RSPH1Q8WYR4 309 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 LPPQ93052 612 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 TSHZ2Q9NRE2 1034 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 FAM105AQ9NUU6 356 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 INPP5FQ9Y2H2 1132 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms