RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 STX1BP61266 288 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 ZKSCAN8Q15776 578 aaPredicted RBP15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 PRMT6Q96LA8 375 aaPredicted RBP15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 GNGT2O14610 69 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 DDR1Q08345 913 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 ENAHQ8N8S7 591 aaPredicted RBP15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 PPP2R3CQ969Q6 453 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 FGD4Q96M96 766 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 EPB41L5Q9HCM4 733 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 MX2P20592 715 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 SLCO1A2P46721 670 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 HAUS8Q9BT25 410 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 TTC4O95801 387 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 CPB1P15086 417 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 SFNP31947 248 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 KIF23Q02241 960 aaPredicted RBP15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 PDE11AQ9HCR9 933 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 EIF3CLB5ME19 914 aaKnown RBP15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 TOM1L1O75674 476 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 ECEL1O95672 775 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 GH1P01241 217 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 PMLP29590 882 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 GCLCP48506 637 aaPredicted RBP15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 MXI1P50539 228 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 PHLDB3Q6NSJ2 640 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 DPF3Q92784 378 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 EIF3CQ99613 913 aaKnown RBP15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 TCP11X2Q5H9J9 407 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 SPOPLQ6IQ16 392 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 USP17L6PQ6QN14 398 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 RMDN2Q96LZ7 410 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 GBP5Q96PP8 586 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 SLC7A5P2Q9GIP4 190 aa15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 SAMSN1Q9NSI8 373 aaKnown RBP15.28■□□□□ 0.04
PCDHA11-201ENST00000398640 PXDNQ92626 1479 aa15.27■□□□□ 0.04
PCDHA11-201ENST00000398640 CLTAP09496 248 aa15.27■□□□□ 0.04
PCDHA11-201ENST00000398640 KLRK1P26718 216 aa15.27■□□□□ 0.04
PCDHA11-201ENST00000398640 DEPDC1BQ8WUY9 529 aa15.27■□□□□ 0.04
PCDHA11-201ENST00000398640 MRPL46Q9H2W6 279 aaKnown RBP15.27■□□□□ 0.04
PCDHA11-201ENST00000398640 SPTLC3Q9NUV7 552 aa15.27■□□□□ 0.04
PCDHA11-201ENST00000398640 TLK1Q9UKI8 766 aa15.27■□□□□ 0.04
PCDHA11-201ENST00000398640 DAAM1Q9Y4D1 1078 aa15.27■□□□□ 0.04
PCDHA11-201ENST00000398640 FKBP3Q00688 224 aaKnown RBP15.27■□□□□ 0.04
PCDHA11-201ENST00000398640 CYB5R4Q7L1T6 521 aa15.27■□□□□ 0.04
PCDHA11-201ENST00000398640 CHST13Q8NET6 341 aa15.27■□□□□ 0.04
PCDHA11-201ENST00000398640 RUNDC3BQ96NL0 473 aa15.27■□□□□ 0.04
PCDHA11-201ENST00000398640 BHMT2Q9H2M3 363 aa15.27■□□□□ 0.04
PCDHA11-201ENST00000398640 GPR75-ASB3A0A0A6YYF3 556 aa15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 WDR91A4D1P6 747 aa15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 MGEA5O60502 916 aa15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 GABPB1Q06547 395 aaPredicted RBP15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 SURF1Q15526 300 aa15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 NBPF9Q3BBW0 867 aa15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 MRFAP1L1Q96HT8 127 aa15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 GCOM2Q9BZD3 368 aaPredicted RBP15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 MRPL47Q9HD33 250 aaKnown RBP15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 DNAJC17Q9NVM6 304 aaKnown RBP15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 ITM2BQ9Y287 266 aa15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 GSTA4O15217 222 aa15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 IRX4P78413 519 aa15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 IL9RQ01113 521 aa15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 SWSAP1Q6NVH7 229 aa15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 PLEKHH3Q7Z736 793 aa15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 SMAP1Q8IYB5 467 aaPredicted RBP15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 BCAS4Q8TDM0 211 aa15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 POLD4Q9HCU8 107 aa15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 MTMR4Q9NYA4 1195 aa15.27■□□□□ 0.03
PCDHA11-201ENST00000398640 A0A1W2PQ27 194 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 A0A1W2PQ64 194 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 A0A1W2PQD8 194 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 SPECC1L-ADORA2AF8WAN1 911 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 DCAF4L1Q3SXM0 396 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 SBK1Q52WX2 424 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 C10orf76Q5T2E6 689 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 CLDN3O15551 220 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 HUS1O60921 280 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 FBXW4P57775 412 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 C16orf86Q6ZW13 317 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 NDUFAF2Q8N183 169 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 ZDHHC15Q96MV8 337 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 INTS9Q9NV88 658 aaKnown RBP15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 CDR2Q01850 454 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 TNFAIP2Q03169 654 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 CHADLQ6NUI6 762 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 TOPORSQ9NS56 1045 aaPredicted RBP15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 NDUFB10O96000 172 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 ETF1P62495 437 aaKnown RBP15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 MRPS25P82663 173 aaKnown RBP15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 CACNB2Q08289 660 aaPredicted RBP15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 MAPK6Q16659 721 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 PFKFB3Q16875 520 aaPredicted RBP15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 SZRD1Q7Z422 152 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 GAS2L3Q86XJ1 694 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 CPSF2Q9P2I0 782 aaKnown RBP15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 CTSHP09668 335 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 PCGF5Q86SE9 256 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 TRPC7Q9HCX4 862 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 POLR3EQ9NVU0 708 aa15.26■□□□□ 0.03
PCDHA11-201ENST00000398640 CYP27A1Q02318 531 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms