RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 RRN3P2A6NIE6 340 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 NCAM2O15394 837 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 RNF40O75150 1001 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 SPAG6O75602 509 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 TJP3O95049 919 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 GPTP24298 496 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 MAPRE2Q15555 327 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 C8orf34Q49A92 452 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 PRR16Q569H4 304 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 CASC4Q6P4E1 433 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 PTF1AQ7RTS3 328 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 NME8Q8N427 588 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 PIP4K2CQ8TBX8 421 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 PARD3BQ8TEW8 1205 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 FRMD8P1Q9BZ68 369 aaPredicted RBP2.91□□□□□ -1.94
CHD9-202ENST00000398510 KLHL4Q9C0H6 718 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 RABEP2Q9H5N1 569 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 C17orf75Q9HAS0 396 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 SEPT9Q9UHD8 586 aaPredicted RBP2.91□□□□□ -1.94
CHD9-202ENST00000398510 TMCO1Q9UM00 188 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 RALGAPA1Q6GYQ0 2036 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 ARHGAP10A1A4S6 786 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 LMNAP02545 664 aaKnown RBP2.91□□□□□ -1.94
CHD9-202ENST00000398510 HSPA1AP0DMV8 641 aaKnown RBP2.91□□□□□ -1.94
CHD9-202ENST00000398510 HSPA1BP0DMV9 641 aaKnown RBP2.91□□□□□ -1.94
CHD9-202ENST00000398510 HSD17B4P51659 736 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 PDE1AP54750 535 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 ALDH6A1Q02252 535 aaKnown RBP2.91□□□□□ -1.94
CHD9-202ENST00000398510 GIT2Q14161 759 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 C6orf118Q5T5N4 469 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 ATG16L1Q676U5 607 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 DPH6Q7L8W6 267 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 NOSTRINQ8IVI9 506 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 TSR2Q969E8 191 aaKnown RBP2.91□□□□□ -1.94
CHD9-202ENST00000398510 TUBGCP2Q9BSJ2 902 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 FTOQ9C0B1 505 aaKnown RBP eCLIP2.91□□□□□ -1.94
CHD9-202ENST00000398510 ZWILCHQ9H900 591 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 ST7Q9NRC1 585 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 AATFQ9NY61 560 aaKnown RBP eCLIP2.91□□□□□ -1.94
CHD9-202ENST00000398510 KANSL3Q9P2N6 904 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 BLOC1S6Q9UL45 172 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 DOCK1Q14185 1865 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 LOC102724428A0A0B4J2F2 783 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 IQANK1A0A1B0GTG1 560 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 KPNA7A9QM74 516 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 O00370 1275 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 ASAP2O43150 1006 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 INHBAP08476 426 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 SLC2A4P14672 509 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 S100GP29377 79 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 PPM1AP35813 382 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 SIK1P57059 783 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 KRR1Q13601 381 aaKnown RBP2.91□□□□□ -1.94
CHD9-202ENST00000398510 THOC5Q13769 683 aaKnown RBP2.91□□□□□ -1.94
CHD9-202ENST00000398510 STXBP2Q15833 593 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 DGKDQ16760 1214 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 FAM98CQ17RN3 349 aaKnown RBP2.91□□□□□ -1.94
CHD9-202ENST00000398510 PPP6R3Q5H9R7 873 aaPredicted RBP2.91□□□□□ -1.94
CHD9-202ENST00000398510 TMC6Q7Z403 805 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 BLIDQ8IZY5 108 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 B3GALNT2Q8NCR0 500 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 ACCSQ96QU6 501 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 ZBTB18Q99592 522 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 ADNPQ9H2P0 1102 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 TSHZ2Q9NRE2 1034 aa2.91□□□□□ -1.94
CHD9-202ENST00000398510 A0A1B0GUL7 405 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 EIF4E1BA6NMX2 242 aaKnown RBP2.9□□□□□ -1.94
CHD9-202ENST00000398510 USP17L5A8MUK1 530 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 WWP2O00308 870 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 ERCC3P19447 782 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 MAPK8P45983 427 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 GPSM2P81274 684 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 TFCP2Q12800 502 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 PPIL2Q13356 520 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 PPP2R5CQ13362 524 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 FLOT2Q14254 428 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 THOC7Q6I9Y2 204 aaKnown RBP2.9□□□□□ -1.94
CHD9-202ENST00000398510 STYK1Q6J9G0 422 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 NUTM1Q86Y26 1132 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 MYOCDQ8IZQ8 938 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 PDIK1LQ8N165 341 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 CXorf38Q8TB03 319 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 MAGEC3Q8TD91 643 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 SNX29Q8TEQ0 813 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 INPP5DQ92835 1189 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 ARHGEF26Q96DR7 871 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 CCDC126Q96EE4 140 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 PAGR1Q9BTK6 254 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 ZNF341Q9BYN7 854 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 CCDC177Q9NQR7 707 aaPredicted RBP2.9□□□□□ -1.94
CHD9-202ENST00000398510 ZFATQ9P243 1243 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 ASIC3Q9UHC3 531 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 EMILIN1Q9Y6C2 1016 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 PLXNA1Q9UIW2 1896 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 PHF20L1A8MW92 1017 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 GFPT2O94808 682 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 GPD2P43304 727 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 GRAPQ13588 217 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 CENPPQ6IPU0 288 aa2.9□□□□□ -1.94
CHD9-202ENST00000398510 TTBK2Q6IQ55 1244 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms