RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 HERC4Q5GLZ8 1057 aaPredicted RBP16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 CLLU1OSQ5K130 101 aa16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 NEK8Q86SG6 692 aa16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 ZNF598Q86UK7 904 aaKnown RBP16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 ZNF410Q86VK4 478 aa16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 RNF135Q8IUD6 432 aa16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 HELQQ8TDG4 1101 aa16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 RSPH1Q8WYR4 309 aa16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 CEP89Q96ST8 783 aa16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 SH2D3AQ9BRG2 576 aa16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 PHF20Q9BVI0 1012 aa16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 INO80BQ9C086 356 aaPredicted RBP16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 NGRNQ9NPE2 291 aaKnown RBP16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 CHST12Q9NRB3 414 aa16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 SPG21Q9NZD8 308 aa16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 SUCLA2Q9P2R7 463 aaPredicted RBP16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 MUTYHQ9UIF7 546 aa16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 A0A087WZ62 844 aa16.02■□□□□ 0.16
SNRNP25-203ENST00000397876 MAFO75444 373 aaPredicted RBP16.02■□□□□ 0.16
SNRNP25-203ENST00000397876 CSDE1O75534 798 aaKnown RBP16.02■□□□□ 0.16
SNRNP25-203ENST00000397876 PBX3P40426 434 aa16.02■□□□□ 0.16
SNRNP25-203ENST00000397876 PPP2R5CQ13362 524 aa16.02■□□□□ 0.16
SNRNP25-203ENST00000397876 PLA2G4FQ68DD2 849 aa16.02■□□□□ 0.16
SNRNP25-203ENST00000397876 ANO5Q75V66 913 aa16.02■□□□□ 0.16
SNRNP25-203ENST00000397876 RHPN2Q8IUC4 686 aa16.02■□□□□ 0.16
SNRNP25-203ENST00000397876 VN1R2Q8NFZ6 395 aa16.02■□□□□ 0.16
SNRNP25-203ENST00000397876 FAM20AQ96MK3 541 aa16.02■□□□□ 0.16
SNRNP25-203ENST00000397876 NAP1L4Q99733 375 aaKnown RBP16.02■□□□□ 0.16
SNRNP25-203ENST00000397876 FDXACB1Q9BRP7 624 aaPredicted RBP16.02■□□□□ 0.16
SNRNP25-203ENST00000397876 PIN4Q9Y237 131 aaKnown RBP16.02■□□□□ 0.16
SNRNP25-203ENST00000397876 MARCH6O60337 910 aa16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 SKIP12755 728 aa16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 ATF7P17544 494 aaPredicted RBP16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 PHKA2P46019 1235 aa16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 QARSP47897 775 aaKnown RBP16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 RBM10P98175 930 aaKnown RBP16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 TWF2Q6IBS0 349 aaKnown RBP16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 PPP4R3AQ6IN85 833 aa16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 CATSPER4Q7RTX7 472 aa16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 TMC7Q7Z402 723 aa16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 SLC39A11Q8N1S5 342 aa16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 SLC7A3Q8WY07 619 aa16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 NLRP4Q96MN2 994 aa16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 PHF7Q9BWX1 381 aaPredicted RBP16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 KCNMB3Q9NPA1 279 aa16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 CYP26B1Q9NR63 512 aa16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 VAV3Q9UKW4 847 aa16.01■□□□□ 0.15
SNRNP25-203ENST00000397876 CARNS1A5YM72 827 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 LOC730098B7Z3J9 87 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 EML1O00423 815 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 TBX3O15119 743 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 CCNT1O60563 726 aaKnown RBP16■□□□□ 0.15
SNRNP25-203ENST00000397876 PFKFB2O60825 505 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 TECP42680 631 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 ALDH7A1P49419 539 aaKnown RBP16■□□□□ 0.15
SNRNP25-203ENST00000397876 RAB27AP51159 221 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 SMC1AQ14683 1233 aaKnown RBP16■□□□□ 0.15
SNRNP25-203ENST00000397876 ANKRD1Q15327 319 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 LLGL2Q6P1M3 1020 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 TMEM184AQ6ZMB5 413 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 PIK3AP1Q6ZUJ8 805 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 EXOC8Q8IYI6 725 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 WASF1Q92558 559 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 TRAIPQ9BWF2 469 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 TPCN1Q9ULQ1 816 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 PPME1Q9Y570 386 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 C5orf42Q9H799 3197 aa16■□□□□ 0.15
SNRNP25-203ENST00000397876 MUC6Q6W4X9 2439 aa15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 HIDE1A8MVS5 230 aa15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 P4HBP07237 508 aaKnown RBP15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 HOXD11P31277 338 aaPredicted RBP15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 CA8P35219 290 aa15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 RFC5P40937 340 aa15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 POLGP54098 1239 aaPredicted RBP15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 BCAR1P56945 870 aa15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 ANAPC15P60006 121 aa15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 BMS1Q14692 1282 aaKnown RBP15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 CBX2Q14781 532 aaPredicted RBP15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 ANKRD54Q6NXT1 300 aa15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 GLB1LQ6UWU2 654 aa15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 KSR1Q8IVT5 923 aa15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 SUSD6Q92537 303 aa15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 EDAQ92838 391 aa15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 TMEM169Q96HH4 297 aa15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 RPGRIP1Q96KN7 1286 aa15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 CEP170P1Q96L14 293 aa15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 BRMS1Q9HCU9 246 aa15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 ORC3Q9UBD5 711 aaPredicted RBP15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 COL4A3BPQ9Y5P4 624 aa15.99■□□□□ 0.15
SNRNP25-203ENST00000397876 ZC3H11AO75152 810 aaKnown RBP eCLIP15.98■□□□□ 0.15
SNRNP25-203ENST00000397876 HOXB8P17481 243 aaPredicted RBP15.98■□□□□ 0.15
SNRNP25-203ENST00000397876 NPEPPSP55786 919 aa15.98■□□□□ 0.15
SNRNP25-203ENST00000397876 KCNC3Q14003 757 aa15.98■□□□□ 0.15
SNRNP25-203ENST00000397876 EPHA7Q15375 998 aa15.98■□□□□ 0.15
SNRNP25-203ENST00000397876 NCAPH2Q6IBW4 605 aa15.98■□□□□ 0.15
SNRNP25-203ENST00000397876 HFE2Q6ZVN8 426 aa15.98■□□□□ 0.15
SNRNP25-203ENST00000397876 POTEDQ86YR6 584 aa15.98■□□□□ 0.15
SNRNP25-203ENST00000397876 SLFN12Q8IYM2 578 aa15.98■□□□□ 0.15
SNRNP25-203ENST00000397876 OXER1Q8TDS5 423 aa15.98■□□□□ 0.15
SNRNP25-203ENST00000397876 PSPC1Q8WXF1 523 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms