RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 DDX53Q86TM3 631 aaKnown RBP16.95■□□□□ 0.3
SEC13-206ENST00000397102 SGMS1Q86VZ5 419 aa16.95■□□□□ 0.3
SEC13-206ENST00000397102 PPFIBP1Q86W92 1011 aa16.95■□□□□ 0.3
SEC13-206ENST00000397102 TMEM173Q86WV6 379 aaPredicted RBP16.95■□□□□ 0.3
SEC13-206ENST00000397102 LRRC71Q8N4P6 559 aa16.95■□□□□ 0.3
SEC13-206ENST00000397102 ZNF577Q9BSK1 485 aa16.95■□□□□ 0.3
SEC13-206ENST00000397102 SEMA4AQ9H3S1 761 aa16.95■□□□□ 0.3
SEC13-206ENST00000397102 RBM28Q9NW13 759 aaKnown RBP16.95■□□□□ 0.3
SEC13-206ENST00000397102 FBXL21Q9UKT6 434 aa16.95■□□□□ 0.3
SEC13-206ENST00000397102 PCDHA10Q9Y5I2 948 aa16.95■□□□□ 0.3
SEC13-206ENST00000397102 VPS13AQ96RL7 3174 aa16.94■□□□□ 0.3
SEC13-206ENST00000397102 ZC3H11AO75152 810 aaKnown RBP eCLIP16.94■□□□□ 0.3
SEC13-206ENST00000397102 CYP3A4P08684 503 aa16.94■□□□□ 0.3
SEC13-206ENST00000397102 SETQ01105 290 aaPredicted RBP16.94■□□□□ 0.3
SEC13-206ENST00000397102 SIX5Q8N196 739 aa16.94■□□□□ 0.3
SEC13-206ENST00000397102 FEZF2Q8TBJ5 459 aa16.94■□□□□ 0.3
SEC13-206ENST00000397102 CRYGNQ8WXF5 182 aa16.94■□□□□ 0.3
SEC13-206ENST00000397102 IGSF21Q96ID5 467 aa16.94■□□□□ 0.3
SEC13-206ENST00000397102 KCNK12Q9HB15 430 aa16.94■□□□□ 0.3
SEC13-206ENST00000397102 GABBR1Q9UBS5 961 aa16.94■□□□□ 0.3
SEC13-206ENST00000397102 TCEAL9Q9UHQ7 104 aa16.94■□□□□ 0.3
SEC13-206ENST00000397102 SYNE3Q6ZMZ3 975 aa16.93■□□□□ 0.3
SEC13-206ENST00000397102 ZNF668Q96K58 619 aaPredicted RBP16.93■□□□□ 0.3
SEC13-206ENST00000397102 SCLT1Q96NL6 688 aa16.93■□□□□ 0.3
SEC13-206ENST00000397102 LRRC2Q9BYS8 371 aa16.93■□□□□ 0.3
SEC13-206ENST00000397102 CHST12Q9NRB3 414 aa16.93■□□□□ 0.3
SEC13-206ENST00000397102 BARHL2Q9NY43 387 aa16.93■□□□□ 0.3
SEC13-206ENST00000397102 IGSF9Q9P2J2 1179 aa16.93■□□□□ 0.3
SEC13-206ENST00000397102 SPDYE4A6NLX3 237 aa16.92■□□□□ 0.3
SEC13-206ENST00000397102 LMNAP02545 664 aaKnown RBP16.92■□□□□ 0.3
SEC13-206ENST00000397102 FGFR4P22455 802 aa16.92■□□□□ 0.3
SEC13-206ENST00000397102 FUT2Q10981 343 aa16.92■□□□□ 0.3
SEC13-206ENST00000397102 PTPN14Q15678 1187 aa16.92■□□□□ 0.3
SEC13-206ENST00000397102 JAKMIP3Q5VZ66 844 aa16.92■□□□□ 0.3
SEC13-206ENST00000397102 APOA5Q6Q788 366 aa16.92■□□□□ 0.3
SEC13-206ENST00000397102 KCNG4Q8TDN1 519 aa16.92■□□□□ 0.3
SEC13-206ENST00000397102 NLRP7Q8WX94 980 aa16.92■□□□□ 0.3
SEC13-206ENST00000397102 RMDN1Q96DB5 314 aa16.92■□□□□ 0.3
SEC13-206ENST00000397102 TRAIPQ9BWF2 469 aa16.92■□□□□ 0.3
SEC13-206ENST00000397102 NRDE2Q9H7Z3 1164 aa16.92■□□□□ 0.3
SEC13-206ENST00000397102 V9GY48 417 aaPredicted RBP16.92■□□□□ 0.3
SEC13-206ENST00000397102 SLC27A2O14975 620 aa16.91■□□□□ 0.3
SEC13-206ENST00000397102 OATP04181 439 aa16.91■□□□□ 0.3
SEC13-206ENST00000397102 GALTP07902 379 aa16.91■□□□□ 0.3
SEC13-206ENST00000397102 PHKA2P46019 1235 aa16.91■□□□□ 0.3
SEC13-206ENST00000397102 LETM2Q2VYF4 491 aa16.91■□□□□ 0.3
SEC13-206ENST00000397102 C15orf39Q6ZRI6 1047 aa16.91■□□□□ 0.3
SEC13-206ENST00000397102 EXOC6Q8TAG9 804 aa16.91■□□□□ 0.3
SEC13-206ENST00000397102 BCL7CQ8WUZ0 217 aaPredicted RBP16.91■□□□□ 0.3
SEC13-206ENST00000397102 NRBP2Q9NSY0 501 aa16.91■□□□□ 0.3
SEC13-206ENST00000397102 TBC1D13Q9NVG8 400 aa16.91■□□□□ 0.3
SEC13-206ENST00000397102 WNT16Q9UBV4 365 aa16.91■□□□□ 0.3
SEC13-206ENST00000397102 STK39Q9UEW8 545 aa16.91■□□□□ 0.3
SEC13-206ENST00000397102 SAMM50Q9Y512 469 aa16.91■□□□□ 0.3
SEC13-206ENST00000397102 MED19A0JLT2 244 aaPredicted RBP16.9■□□□□ 0.3
SEC13-206ENST00000397102 WDR64B1ANS9 1081 aa16.9■□□□□ 0.3
SEC13-206ENST00000397102 ZNF862O60290 1169 aa16.9■□□□□ 0.3
SEC13-206ENST00000397102 SKIP12755 728 aa16.9■□□□□ 0.3
SEC13-206ENST00000397102 CLCN4P51793 760 aa16.9■□□□□ 0.3
SEC13-206ENST00000397102 PRKCEQ02156 737 aa16.9■□□□□ 0.3
SEC13-206ENST00000397102 RTN1Q16799 776 aa16.9■□□□□ 0.3
SEC13-206ENST00000397102 NOMO2Q5JPE7 1267 aa16.9■□□□□ 0.3
SEC13-206ENST00000397102 GLB1LQ6UWU2 654 aa16.9■□□□□ 0.3
SEC13-206ENST00000397102 DGLUCYQ7Z3D6 616 aa16.9■□□□□ 0.3
SEC13-206ENST00000397102 KLHL5Q96PQ7 755 aa16.9■□□□□ 0.3
SEC13-206ENST00000397102 VN1R3Q9BXE9 311 aa16.9■□□□□ 0.3
SEC13-206ENST00000397102 EMILIN2Q9BXX0 1053 aa16.9■□□□□ 0.3
SEC13-206ENST00000397102 GCOM2Q9BZD3 368 aaPredicted RBP16.9■□□□□ 0.3
SEC13-206ENST00000397102 FANCMQ8IYD8 2048 aa16.9■□□□□ 0.3
SEC13-206ENST00000397102 EP300Q09472 2414 aaPredicted RBP16.9■□□□□ 0.3
SEC13-206ENST00000397102 ZNF292O60281 2723 aa16.9■□□□□ 0.3
SEC13-206ENST00000397102 NARSO43776 548 aaKnown RBP16.89■□□□□ 0.29
SEC13-206ENST00000397102 KLRC2P26717 231 aa16.89■□□□□ 0.29
SEC13-206ENST00000397102 CDC42EP1Q00587 391 aa16.89■□□□□ 0.29
SEC13-206ENST00000397102 RNASELQ05823 741 aaKnown RBP16.89■□□□□ 0.29
SEC13-206ENST00000397102 TBC1D8BQ0IIM8 1120 aa16.89■□□□□ 0.29
SEC13-206ENST00000397102 TWF2Q6IBS0 349 aaKnown RBP16.89■□□□□ 0.29
SEC13-206ENST00000397102 LPPQ93052 612 aa16.89■□□□□ 0.29
SEC13-206ENST00000397102 LSG1Q9H089 658 aaKnown RBP16.89■□□□□ 0.29
SEC13-206ENST00000397102 DNAJB4Q9UDY4 337 aa16.89■□□□□ 0.29
SEC13-206ENST00000397102 KRBA1A5PL33 1030 aa16.88■□□□□ 0.29
SEC13-206ENST00000397102 STK25O00506 426 aa16.88■□□□□ 0.29
SEC13-206ENST00000397102 ZBTB43O43298 467 aa16.88■□□□□ 0.29
SEC13-206ENST00000397102 CSDE1O75534 798 aaKnown RBP16.88■□□□□ 0.29
SEC13-206ENST00000397102 CFHP08603 1231 aa16.88■□□□□ 0.29
SEC13-206ENST00000397102 CNPP09543 421 aaKnown RBP16.88■□□□□ 0.29
SEC13-206ENST00000397102 SFPQP23246 707 aaKnown RBP eCLIP16.88■□□□□ 0.29
SEC13-206ENST00000397102 SLC11A1P49279 550 aa16.88■□□□□ 0.29
SEC13-206ENST00000397102 RAB27AP51159 221 aa16.88■□□□□ 0.29
SEC13-206ENST00000397102 NONOQ15233 471 aaKnown RBP eCLIP16.88■□□□□ 0.29
SEC13-206ENST00000397102 PRR16Q569H4 304 aa16.88■□□□□ 0.29
SEC13-206ENST00000397102 CREB3L3Q68CJ9 461 aa16.88■□□□□ 0.29
SEC13-206ENST00000397102 KIAA2013Q8IYS2 634 aa16.88■□□□□ 0.29
SEC13-206ENST00000397102 CMASQ8NFW8 434 aaPredicted RBP16.88■□□□□ 0.29
SEC13-206ENST00000397102 DISC1Q9NRI5 854 aa16.88■□□□□ 0.29
SEC13-206ENST00000397102 FAM105AQ9NUU6 356 aa16.88■□□□□ 0.29
SEC13-206ENST00000397102 INPP5FQ9Y2H2 1132 aa16.88■□□□□ 0.29
SEC13-206ENST00000397102 ESYT2A0FGR8 921 aa16.87■□□□□ 0.29
SEC13-206ENST00000397102 MEIS3P2A8K0S8 358 aa16.87■□□□□ 0.29
SEC13-206ENST00000397102 N4BP1O75113 896 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms