RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 IFT74Q96LB3 600 aa18.18■□□□□ 0.5
AP1S3-202ENST00000396653 NLRP4Q96MN2 994 aa18.18■□□□□ 0.5
AP1S3-202ENST00000396653 SCLT1Q96NL6 688 aa18.18■□□□□ 0.5
AP1S3-202ENST00000396653 OSMRQ99650 979 aa18.18■□□□□ 0.5
AP1S3-202ENST00000396653 GCOM2Q9BZD3 368 aaPredicted RBP18.18■□□□□ 0.5
AP1S3-202ENST00000396653 INO80BQ9C086 356 aaPredicted RBP18.18■□□□□ 0.5
AP1S3-202ENST00000396653 MICAL3Q7RTP6 2002 aa18.18■□□□□ 0.5
AP1S3-202ENST00000396653 A0A087WZ62 844 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 NBNO60934 754 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 TBCAO75347 108 aaKnown RBP18.17■□□□□ 0.5
AP1S3-202ENST00000396653 PRPF40AO75400 957 aaKnown RBP18.17■□□□□ 0.5
AP1S3-202ENST00000396653 MYL1P05976 194 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 DARSP14868 501 aaKnown RBP18.17■□□□□ 0.5
AP1S3-202ENST00000396653 CSF2RAP15509 400 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 PHKA2P46019 1235 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 DMP1Q13316 513 aaPredicted RBP18.17■□□□□ 0.5
AP1S3-202ENST00000396653 SNW1Q13573 536 aaKnown RBP18.17■□□□□ 0.5
AP1S3-202ENST00000396653 GPNMBQ14956 572 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 LONRF3Q496Y0 759 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 CDCA2Q69YH5 1023 aaPredicted RBP18.17■□□□□ 0.5
AP1S3-202ENST00000396653 KRBA2Q6ZNG9 492 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 SRGAP1Q7Z6B7 1085 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 RPUSD2Q8IZ73 545 aaKnown RBP18.17■□□□□ 0.5
AP1S3-202ENST00000396653 RNF149Q8NC42 400 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 BSNDQ8WZ55 320 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 DNAJC19Q96DA6 116 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 TIGD1Q96MW7 591 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 C7orf25Q9BPX7 421 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 FDXACB1Q9BRP7 624 aaPredicted RBP18.17■□□□□ 0.5
AP1S3-202ENST00000396653 TRIM9Q9C026 710 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 IFT122Q9HBG6 1241 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 IL23AQ9NPF7 189 aa18.17■□□□□ 0.5
AP1S3-202ENST00000396653 LARSQ9P2J5 1176 aaKnown RBP18.17■□□□□ 0.5
AP1S3-202ENST00000396653 FAM13AO94988 1023 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 PLS3P13797 630 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 EIF4BP23588 611 aaKnown RBP18.16■□□□□ 0.5
AP1S3-202ENST00000396653 PTENP60484 403 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 LPIN1Q14693 890 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 PCBP1Q15365 356 aaKnown RBP eCLIP18.16■□□□□ 0.5
AP1S3-202ENST00000396653 TPRNQ4KMQ1 711 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 KANK3Q6NY19 840 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 KSR1Q8IVT5 923 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 CNNM3Q8NE01 707 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 TMEM40Q8WWA1 233 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 SPIRE2Q8WWL2 714 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 APBB2Q92870 758 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 KCNN1Q92952 543 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 PPP1R16BQ96T49 567 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 C2orf40Q9H1Z8 148 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 CDHR5Q9HBB8 845 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 PARVGQ9HBI0 331 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 GINS2Q9Y248 185 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 PHLPP2Q6ZVD8 1323 aa18.16■□□□□ 0.5
AP1S3-202ENST00000396653 NPHP3-ACAD11A0A0J9YXS1 232 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 FRMD3A2A2Y4 597 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 H0YGN5 161 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 RPS6KA5O75582 802 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 SRGAP2CP0DJJ0 459 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 GHRP10912 638 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 GAP43P17677 238 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 LIG1P18858 919 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 SCP2P22307 547 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 MAGEA10P43363 369 aaPredicted RBP18.15■□□□□ 0.5
AP1S3-202ENST00000396653 RAD51AP2Q09MP3 1159 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 PLEKHG4Q58EX7 1191 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 PSRC1Q6PGN9 363 aaPredicted RBP18.15■□□□□ 0.5
AP1S3-202ENST00000396653 DYMQ7RTS9 669 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 ZBTB8OSQ8IWT0 167 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 ELOA2Q8IYF1 753 aaPredicted RBP18.15■□□□□ 0.5
AP1S3-202ENST00000396653 VWCEQ96DN2 955 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 PAGE5Q96GU1 130 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 NTPCRQ9BSD7 190 aaKnown RBP18.15■□□□□ 0.5
AP1S3-202ENST00000396653 LMBRD1Q9NUN5 540 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 SEL1LQ9UBV2 794 aa18.15■□□□□ 0.5
AP1S3-202ENST00000396653 LRRIQ4A6NIV6 560 aa18.14■□□□□ 0.49
AP1S3-202ENST00000396653 GPR182O15218 404 aa18.14■□□□□ 0.49
AP1S3-202ENST00000396653 GTPBP6O43824 516 aaPredicted RBP18.14■□□□□ 0.49
AP1S3-202ENST00000396653 SFPQP23246 707 aaKnown RBP eCLIP18.14■□□□□ 0.49
AP1S3-202ENST00000396653 PEX3P56589 373 aa18.14■□□□□ 0.49
AP1S3-202ENST00000396653 MDM2Q00987 491 aaPredicted RBP18.14■□□□□ 0.49
AP1S3-202ENST00000396653 CACNB1Q02641 598 aaPredicted RBP18.14■□□□□ 0.49
AP1S3-202ENST00000396653 PAK2Q13177 524 aa18.14■□□□□ 0.49
AP1S3-202ENST00000396653 CNKSR3Q6P9H4 555 aa18.14■□□□□ 0.49
AP1S3-202ENST00000396653 FAM228AQ86W67 206 aa18.14■□□□□ 0.49
AP1S3-202ENST00000396653 CCDC65Q8IXS2 484 aa18.14■□□□□ 0.49
AP1S3-202ENST00000396653 SLC17A8Q8NDX2 589 aa18.14■□□□□ 0.49
AP1S3-202ENST00000396653 DEPTORQ8TB45 409 aa18.14■□□□□ 0.49
AP1S3-202ENST00000396653 SEPT8Q92599 483 aa18.14■□□□□ 0.49
AP1S3-202ENST00000396653 STAMQ92783 540 aa18.14■□□□□ 0.49
AP1S3-202ENST00000396653 ZNF668Q96K58 619 aaPredicted RBP18.14■□□□□ 0.49
AP1S3-202ENST00000396653 GDF15Q99988 308 aa18.14■□□□□ 0.49
AP1S3-202ENST00000396653 IFIH1Q9BYX4 1025 aaKnown RBP18.14■□□□□ 0.49
AP1S3-202ENST00000396653 ERVK-5Q9HDB9 667 aa18.14■□□□□ 0.49
AP1S3-202ENST00000396653 NOC2LQ9Y3T9 749 aaKnown RBP18.14■□□□□ 0.49
AP1S3-202ENST00000396653 H0YCG3 227 aa18.13■□□□□ 0.49
AP1S3-202ENST00000396653 KINO60870 393 aaKnown RBP18.13■□□□□ 0.49
AP1S3-202ENST00000396653 NR1I2O75469 434 aa18.13■□□□□ 0.49
AP1S3-202ENST00000396653 MAPTP10636 758 aaKnown RBP18.13■□□□□ 0.49
AP1S3-202ENST00000396653 ABCD1P33897 745 aa18.13■□□□□ 0.49
AP1S3-202ENST00000396653 AFMP43652 599 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms