RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 IKQ13123 557 aaPredicted RBP17.04■□□□□ 0.32
HOXA3-202ENST00000396352 QPCTQ16769 361 aa17.04■□□□□ 0.32
HOXA3-202ENST00000396352 ZNF720Q7Z2F6 126 aa17.04■□□□□ 0.32
HOXA3-202ENST00000396352 TPH2Q8IWU9 490 aa17.04■□□□□ 0.32
HOXA3-202ENST00000396352 THAP2Q9H0W7 228 aa17.04■□□□□ 0.32
HOXA3-202ENST00000396352 CARD9Q9H257 536 aa17.04■□□□□ 0.32
HOXA3-202ENST00000396352 AGPAT3Q9NRZ7 376 aa17.04■□□□□ 0.32
HOXA3-202ENST00000396352 ZDHHC18Q9NUE0 388 aa17.04■□□□□ 0.32
HOXA3-202ENST00000396352 DDX20Q9UHI6 824 aaKnown RBP17.04■□□□□ 0.32
HOXA3-202ENST00000396352 DIS3Q9Y2L1 958 aaKnown RBP17.04■□□□□ 0.32
HOXA3-202ENST00000396352 SCN9AQ15858 1988 aa17.04■□□□□ 0.32
HOXA3-202ENST00000396352 PSMD10O75832 226 aa17.03■□□□□ 0.32
HOXA3-202ENST00000396352 DUPD1Q68J44 220 aa17.03■□□□□ 0.32
HOXA3-202ENST00000396352 BTNL9Q6UXG8 535 aa17.03■□□□□ 0.32
HOXA3-202ENST00000396352 EPB41L4BQ9H329 900 aa17.03■□□□□ 0.32
HOXA3-202ENST00000396352 APEX2Q9UBZ4 518 aa17.03■□□□□ 0.32
HOXA3-202ENST00000396352 UBE4BO95155 1302 aa17.03■□□□□ 0.32
HOXA3-202ENST00000396352 COPB2P35606 906 aa17.03■□□□□ 0.32
HOXA3-202ENST00000396352 MAGOHP61326 146 aaKnown RBP17.03■□□□□ 0.32
HOXA3-202ENST00000396352 PPP2R5CQ13362 524 aa17.03■□□□□ 0.32
HOXA3-202ENST00000396352 MAGOHBQ96A72 148 aaKnown RBP17.03■□□□□ 0.32
HOXA3-202ENST00000396352 FMO2Q99518 471 aa17.03■□□□□ 0.32
HOXA3-202ENST00000396352 TRIM31Q9BZY9 425 aa17.03■□□□□ 0.32
HOXA3-202ENST00000396352 VCPKMTQ9H867 229 aa17.03■□□□□ 0.32
HOXA3-202ENST00000396352 WRAP73Q9P2S5 460 aaPredicted RBP17.03■□□□□ 0.32
HOXA3-202ENST00000396352 FAM170AA1A519 330 aa17.02■□□□□ 0.32
HOXA3-202ENST00000396352 BMP3P12645 472 aa17.02■□□□□ 0.32
HOXA3-202ENST00000396352 CYP2J2P51589 502 aa17.02■□□□□ 0.32
HOXA3-202ENST00000396352 ACTN3Q08043 901 aaPredicted RBP17.02■□□□□ 0.32
HOXA3-202ENST00000396352 ABCB5Q2M3G0 1257 aa17.02■□□□□ 0.32
HOXA3-202ENST00000396352 SPDYCQ5MJ68 293 aa17.02■□□□□ 0.32
HOXA3-202ENST00000396352 IPO4Q8TEX9 1081 aaKnown RBP17.02■□□□□ 0.32
HOXA3-202ENST00000396352 ALG3Q92685 438 aa17.02■□□□□ 0.32
HOXA3-202ENST00000396352 TLCD1Q96CP7 247 aa17.02■□□□□ 0.32
HOXA3-202ENST00000396352 CHMP2AO43633 222 aa17.02■□□□□ 0.32
HOXA3-202ENST00000396352 DR1Q01658 176 aa17.02■□□□□ 0.32
HOXA3-202ENST00000396352 KIF22Q14807 665 aa17.02■□□□□ 0.32
HOXA3-202ENST00000396352 KRT71Q3SY84 523 aa17.02■□□□□ 0.32
HOXA3-202ENST00000396352 PHLDB3Q6NSJ2 640 aa17.02■□□□□ 0.32
HOXA3-202ENST00000396352 KIAA0825Q8IV33 1275 aa17.02■□□□□ 0.32
HOXA3-202ENST00000396352 RAPGEF5Q92565 580 aa17.02■□□□□ 0.32
HOXA3-202ENST00000396352 RAB17Q9H0T7 212 aa17.02■□□□□ 0.32
HOXA3-202ENST00000396352 C5orf60A6NFR6 353 aa17.02■□□□□ 0.31
HOXA3-202ENST00000396352 PPP2R5AQ15172 486 aa17.02■□□□□ 0.31
HOXA3-202ENST00000396352 ODF2Q5BJF6 829 aa17.02■□□□□ 0.31
HOXA3-202ENST00000396352 SWT1Q5T5J6 900 aaKnown RBP17.02■□□□□ 0.31
HOXA3-202ENST00000396352 RNF187Q5TA31 235 aaPredicted RBP17.02■□□□□ 0.31
HOXA3-202ENST00000396352 LRCH2Q5VUJ6 765 aa17.02■□□□□ 0.31
HOXA3-202ENST00000396352 ADAT2Q7Z6V5 191 aaKnown RBP17.02■□□□□ 0.31
HOXA3-202ENST00000396352 LMO3Q8TAP4 145 aa17.02■□□□□ 0.31
HOXA3-202ENST00000396352 CEP89Q96ST8 783 aa17.02■□□□□ 0.31
HOXA3-202ENST00000396352 ATP8A1Q9Y2Q0 1164 aa17.02■□□□□ 0.31
HOXA3-202ENST00000396352 VCAM1P19320 739 aa17.01■□□□□ 0.31
HOXA3-202ENST00000396352 MYL7Q01449 175 aa17.01■□□□□ 0.31
HOXA3-202ENST00000396352 ZNF211Q13398 564 aaPredicted RBP17.01■□□□□ 0.31
HOXA3-202ENST00000396352 PRPF4BQ13523 1007 aaKnown RBP17.01■□□□□ 0.31
HOXA3-202ENST00000396352 BYSLQ13895 437 aaKnown RBP17.01■□□□□ 0.31
HOXA3-202ENST00000396352 SLC5A5Q92911 643 aa17.01■□□□□ 0.31
HOXA3-202ENST00000396352 PSMD1Q99460 953 aa17.01■□□□□ 0.31
HOXA3-202ENST00000396352 ERP44Q9BS26 406 aa17.01■□□□□ 0.31
HOXA3-202ENST00000396352 DBNDD1Q9H9R9 158 aa17.01■□□□□ 0.31
HOXA3-202ENST00000396352 SEL1LQ9UBV2 794 aa17.01■□□□□ 0.31
HOXA3-202ENST00000396352 PRR12Q9ULL5 1215 aa17.01■□□□□ 0.31
HOXA3-202ENST00000396352 LOXHD1Q8IVV2 1947 aa17.01■□□□□ 0.31
HOXA3-202ENST00000396352 CCDC13Q8IYE1 715 aa17.01■□□□□ 0.31
HOXA3-202ENST00000396352 GLG1Q92896 1179 aa17.01■□□□□ 0.31
HOXA3-202ENST00000396352 FRMD4BQ9Y2L6 1034 aa17.01■□□□□ 0.31
HOXA3-202ENST00000396352 A0A1W2PRG0 241 aa17.01■□□□□ 0.31
HOXA3-202ENST00000396352 ANKRD62A6NC57 917 aa17.01■□□□□ 0.31
HOXA3-202ENST00000396352 HS2ST1Q7LGA3 356 aa17.01■□□□□ 0.31
HOXA3-202ENST00000396352 FAM178BQ8IXR5 827 aa17.01■□□□□ 0.31
HOXA3-202ENST00000396352 H0YHG0 523 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 RRP1BQ14684 758 aaKnown RBP17■□□□□ 0.31
HOXA3-202ENST00000396352 PLCB4Q15147 1175 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 BANK1Q8NDB2 785 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 CABS1Q96KC9 395 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 NAP1L3Q99457 506 aaPredicted RBP17■□□□□ 0.31
HOXA3-202ENST00000396352 MRIQ9BWK5 157 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 STRA6Q9BX79 667 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 FOXN3O00409 490 aaPredicted RBP17■□□□□ 0.31
HOXA3-202ENST00000396352 BACH1O14867 736 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 SHBGP04278 402 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 TNFAIP3P21580 790 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 PRELPP51888 382 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 HADHBP55084 474 aaKnown RBP17■□□□□ 0.31
HOXA3-202ENST00000396352 EIF3BP55884 814 aaKnown RBP17■□□□□ 0.31
HOXA3-202ENST00000396352 BFSP1Q12934 665 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 DRP2Q13474 957 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 ARHGAP44Q17R89 818 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 SPRED3Q2MJR0 410 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 AADACL2Q6P093 401 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 ZDHHC24Q6UX98 284 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 SLC20A1Q8WUM9 679 aa17■□□□□ 0.31
HOXA3-202ENST00000396352 G3V3G9 751 aa16.99■□□□□ 0.31
HOXA3-202ENST00000396352 LRRN2O75325 713 aa16.99■□□□□ 0.31
HOXA3-202ENST00000396352 GH2P01242 217 aa16.99■□□□□ 0.31
HOXA3-202ENST00000396352 PPP2R5EQ16537 467 aa16.99■□□□□ 0.31
HOXA3-202ENST00000396352 DCAF8Q5TAQ9 597 aa16.99■□□□□ 0.31
HOXA3-202ENST00000396352 JAMLQ86YT9 394 aa16.99■□□□□ 0.31
HOXA3-202ENST00000396352 FMNL3Q8IVF7 1028 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms