RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 TBC1D16Q8TBP0 767 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 SCFD1Q8WVM8 642 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 SPAG5Q96R06 1193 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 PSMB7Q99436 277 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 SH3GL3Q99963 347 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.49□□□□□ -1.53
FGD4-201ENST00000395740 FOXP3Q9BZS1 431 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 INTS9Q9NV88 658 aaKnown RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 RGPD3A6NKT7 1758 aaPredicted RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 RGPD4Q7Z3J3 1758 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 PNMA6FA0A0J9YX94 578 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 SNAP23O00161 211 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 PMM2O15305 246 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 P4HA2O15460 535 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 RGS16O15492 202 aaPredicted RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 BUB1BO60566 1050 aaPredicted RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 HNRNPCL1O60812 293 aaKnown RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 MMEP08473 750 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 XRCC5P13010 732 aaKnown RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 TMOD1P28289 359 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 GBP2P32456 591 aaPredicted RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 MAN1A1P33908 653 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 PTGIRP43119 386 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 CRKLP46109 303 aaKnown RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 DR1Q01658 176 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 PPP2R5AQ15172 486 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 KNOP1Q1ED39 458 aaKnown RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 PPP1R15BQ5SWA1 713 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 HIBCHQ6NVY1 386 aaPredicted RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 RELL1Q8IUW5 271 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 SLF2Q8IX21 1173 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 LARGE2Q8N3Y3 721 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 RIBC1Q8N443 379 aaPredicted RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 MAIP1Q8WWC4 291 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 TMEM237Q96Q45 408 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 RAB3IPQ96QF0 476 aaPredicted RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 PLIN2Q99541 437 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 TRIM7Q9C029 511 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 DDX47Q9H0S4 455 aaKnown RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 SIX2Q9NPC8 291 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 OLFML3Q9NRN5 406 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 USP40Q9NVE5 1235 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 PRKAG3Q9UGI9 489 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 AMACRQ9UHK6 382 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 NIP7Q9Y221 180 aaKnown RBP eCLIP5.49□□□□□ -1.53
FGD4-201ENST00000395740 THRAP3Q9Y2W1 955 aaKnown RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 SH3BP1Q9Y3L3 701 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 USP15Q9Y4E8 981 aaPredicted RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 FRMPD4Q14CM0 1322 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 IGKV6D-41A0A0C4DH26 115 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 SMIM22K7EJ46 135 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 TTI1O43156 1089 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 CAND2O75155 1236 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 PLA2G4BP0C869 781 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 PDHBP11177 359 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 CYP11B2P19099 503 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 GCKP35557 465 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 SLC12A3P55017 1021 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 COPS2P61201 443 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 RPS8P62241 208 aaKnown RBP5.48□□□□□ -1.53
FGD4-201ENST00000395740 TRAF1Q13077 416 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 AP3B2Q13367 1082 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 PPP1R7Q15435 360 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 TRADDQ15628 312 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 CNGA2Q16280 664 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 CDCA2Q69YH5 1023 aaPredicted RBP5.48□□□□□ -1.53
FGD4-201ENST00000395740 ZDHHC24Q6UX98 284 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 RGS9BPQ6ZS82 235 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 ASRGL1Q7L266 308 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 DYMQ7RTS9 669 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 SYT2Q8N9I0 419 aaPredicted RBP5.48□□□□□ -1.53
FGD4-201ENST00000395740 ERMNQ8TAM6 284 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 ART4Q93070 314 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 BORCS6Q96GS4 357 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 PACSIN1Q9BY11 444 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 TMX4Q9H1E5 349 aaPredicted RBP5.48□□□□□ -1.53
FGD4-201ENST00000395740 WNT8AQ9H1J5 351 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 CENPHQ9H3R5 247 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 PPCSQ9HAB8 311 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 RXFP1Q9HBX9 757 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 WHRNQ9P202 907 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 PCDHA12Q9UN75 941 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 ARL2BPQ9Y2Y0 163 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 PCDHA3Q9Y5H8 950 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 NRAPQ86VF7 1730 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 GPR75-ASB3A0A0A6YYF3 556 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 DDX3XO00571 662 aaKnown RBP eCLIP5.48□□□□□ -1.53
FGD4-201ENST00000395740 NDC80O14777 642 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 MAGEB2O15479 319 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 PPP1R12BO60237 982 aaPredicted RBP5.48□□□□□ -1.53
FGD4-201ENST00000395740 USP17L8P0C7I0 530 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 CYP2D6P10635 497 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 SOX5P35711 763 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 GALCP54803 685 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 RWDD2BP57060 319 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 NCALDP61601 193 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 NR1H3Q13133 447 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 BLMHQ13867 455 aa5.48□□□□□ -1.53
FGD4-201ENST00000395740 KIF22Q14807 665 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms