RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 BRPF3Q9ULD4 1205 aa17.92■□□□□ 0.46
SNCA-205ENST00000394991 PCDHA10Q9Y5I2 948 aa17.92■□□□□ 0.46
SNCA-205ENST00000394991 IRAK3Q9Y616 596 aa17.92■□□□□ 0.46
SNCA-205ENST00000394991 FANCMQ8IYD8 2048 aa17.91■□□□□ 0.46
SNCA-205ENST00000394991 PSAPP07602 524 aa17.91■□□□□ 0.46
SNCA-205ENST00000394991 CTSAP10619 480 aa17.91■□□□□ 0.46
SNCA-205ENST00000394991 AOC1P19801 751 aa17.91■□□□□ 0.46
SNCA-205ENST00000394991 ID4P47928 161 aa17.91■□□□□ 0.46
SNCA-205ENST00000394991 ALDH7A1P49419 539 aaKnown RBP17.91■□□□□ 0.46
SNCA-205ENST00000394991 NECTIN1Q15223 517 aa17.91■□□□□ 0.46
SNCA-205ENST00000394991 TMC5Q6UXY8 1006 aa17.91■□□□□ 0.46
SNCA-205ENST00000394991 SMAP1Q8IYB5 467 aaPredicted RBP17.91■□□□□ 0.46
SNCA-205ENST00000394991 FAM167AQ96KS9 214 aa17.91■□□□□ 0.46
SNCA-205ENST00000394991 ZC3H11AO75152 810 aaKnown RBP eCLIP17.9■□□□□ 0.46
SNCA-205ENST00000394991 CSDE1O75534 798 aaKnown RBP17.9■□□□□ 0.46
SNCA-205ENST00000394991 OATP04181 439 aa17.9■□□□□ 0.46
SNCA-205ENST00000394991 TMOD1P28289 359 aa17.9■□□□□ 0.46
SNCA-205ENST00000394991 SETQ01105 290 aaPredicted RBP17.9■□□□□ 0.46
SNCA-205ENST00000394991 SYNE3Q6ZMZ3 975 aa17.9■□□□□ 0.46
SNCA-205ENST00000394991 CCDC105Q8IYK2 499 aa17.9■□□□□ 0.46
SNCA-205ENST00000394991 TCEANC2Q96MN5 208 aa17.9■□□□□ 0.46
SNCA-205ENST00000394991 VN1R3Q9BXE9 311 aa17.9■□□□□ 0.46
SNCA-205ENST00000394991 GLT8D2Q9H1C3 349 aa17.9■□□□□ 0.46
SNCA-205ENST00000394991 FAM217BQ9NTX9 383 aaPredicted RBP17.9■□□□□ 0.46
SNCA-205ENST00000394991 CEP250Q9BV73 2442 aa17.89■□□□□ 0.45
SNCA-205ENST00000394991 B4GALT3O60512 393 aa17.89■□□□□ 0.45
SNCA-205ENST00000394991 CDC27P30260 824 aa17.89■□□□□ 0.45
SNCA-205ENST00000394991 POLGP54098 1239 aaPredicted RBP17.89■□□□□ 0.45
SNCA-205ENST00000394991 PRKCEQ02156 737 aa17.89■□□□□ 0.45
SNCA-205ENST00000394991 DRP2Q13474 957 aa17.89■□□□□ 0.45
SNCA-205ENST00000394991 BMS1Q14692 1282 aaKnown RBP17.89■□□□□ 0.45
SNCA-205ENST00000394991 UGCGQ16739 394 aa17.89■□□□□ 0.45
SNCA-205ENST00000394991 GPR149Q86SP6 731 aa17.89■□□□□ 0.45
SNCA-205ENST00000394991 DDX53Q86TM3 631 aaKnown RBP17.89■□□□□ 0.45
SNCA-205ENST00000394991 ZNF710Q8N1W2 664 aa17.89■□□□□ 0.45
SNCA-205ENST00000394991 LPPQ93052 612 aa17.89■□□□□ 0.45
SNCA-205ENST00000394991 IGSF21Q96ID5 467 aa17.89■□□□□ 0.45
SNCA-205ENST00000394991 SCLT1Q96NL6 688 aa17.89■□□□□ 0.45
SNCA-205ENST00000394991 NRDE2Q9H7Z3 1164 aa17.89■□□□□ 0.45
SNCA-205ENST00000394991 DUSP12Q9UNI6 340 aa17.89■□□□□ 0.45
SNCA-205ENST00000394991 OTOGLQ3ZCN5 2332 aa17.89■□□□□ 0.45
SNCA-205ENST00000394991 DMXL1Q9Y485 3027 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 MEIS3P2A8K0S8 358 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 ZBTB43O43298 467 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 GALTP07902 379 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 PHKA2P46019 1235 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 TDGQ13569 410 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 ANGPT1Q15389 498 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 PTPN14Q15678 1187 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 LONRF3Q496Y0 759 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 PRR16Q569H4 304 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 CCDC149Q6ZUS6 474 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 CABP7Q86V35 215 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 NLRP7Q8WX94 980 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 LENG9Q96B70 501 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 ESYT1Q9BSJ8 1104 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 SFXN1Q9H9B4 322 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 TBC1D13Q9NVG8 400 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 DACT1Q9NYF0 836 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 DNAJB4Q9UDY4 337 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 TCEAL9Q9UHQ7 104 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 SAMM50Q9Y512 469 aa17.88■□□□□ 0.45
SNCA-205ENST00000394991 GOLGA8AA7E2F4 631 aa17.87■□□□□ 0.45
SNCA-205ENST00000394991 GOLGA8BA8MQT2 603 aa17.87■□□□□ 0.45
SNCA-205ENST00000394991 WDR64B1ANS9 1081 aa17.87■□□□□ 0.45
SNCA-205ENST00000394991 SLC11A1P49279 550 aa17.87■□□□□ 0.45
SNCA-205ENST00000394991 GIT2Q14161 759 aa17.87■□□□□ 0.45
SNCA-205ENST00000394991 TARBP2Q15633 366 aaKnown RBP17.87■□□□□ 0.45
SNCA-205ENST00000394991 PFKFB3Q16875 520 aaPredicted RBP17.87■□□□□ 0.45
SNCA-205ENST00000394991 DTWD2Q8NBA8 298 aa17.87■□□□□ 0.45
SNCA-205ENST00000394991 TMEM87AQ8NBN3 555 aa17.87■□□□□ 0.45
SNCA-205ENST00000394991 ACSF2Q96CM8 615 aaPredicted RBP17.87■□□□□ 0.45
SNCA-205ENST00000394991 KCNK12Q9HB15 430 aa17.87■□□□□ 0.45
SNCA-205ENST00000394991 MTCL1Q9Y4B5 1905 aaKnown RBP17.87■□□□□ 0.45
SNCA-205ENST00000394991 ESYT2A0FGR8 921 aa17.86■□□□□ 0.45
SNCA-205ENST00000394991 NARSO43776 548 aaKnown RBP17.86■□□□□ 0.45
SNCA-205ENST00000394991 EDIL3O43854 480 aa17.86■□□□□ 0.45
SNCA-205ENST00000394991 CIITAP33076 1130 aa17.86■□□□□ 0.45
SNCA-205ENST00000394991 EXOSC10Q01780 885 aaKnown RBP17.86■□□□□ 0.45
SNCA-205ENST00000394991 OTOP3Q7RTS5 596 aa17.86■□□□□ 0.45
SNCA-205ENST00000394991 SIX5Q8N196 739 aa17.86■□□□□ 0.45
SNCA-205ENST00000394991 KLHL5Q96PQ7 755 aa17.86■□□□□ 0.45
SNCA-205ENST00000394991 TRAIPQ9BWF2 469 aa17.86■□□□□ 0.45
SNCA-205ENST00000394991 ZMYND12Q9H0C1 365 aa17.86■□□□□ 0.45
SNCA-205ENST00000394991 DISC1Q9NRI5 854 aa17.86■□□□□ 0.45
SNCA-205ENST00000394991 NRBP2Q9NSY0 501 aa17.86■□□□□ 0.45
SNCA-205ENST00000394991 INPP5FQ9Y2H2 1132 aa17.86■□□□□ 0.45
SNCA-205ENST00000394991 NCOR2Q9Y618 2525 aa17.86■□□□□ 0.45
SNCA-205ENST00000394991 N4BP1O75113 896 aaKnown RBP17.85■□□□□ 0.45
SNCA-205ENST00000394991 CLCN4P51793 760 aa17.85■□□□□ 0.45
SNCA-205ENST00000394991 TBC1D8BQ0IIM8 1120 aa17.85■□□□□ 0.45
SNCA-205ENST00000394991 NOMO2Q5JPE7 1267 aa17.85■□□□□ 0.45
SNCA-205ENST00000394991 TWF2Q6IBS0 349 aaKnown RBP17.85■□□□□ 0.45
SNCA-205ENST00000394991 PPFIBP1Q86W92 1011 aa17.85■□□□□ 0.45
SNCA-205ENST00000394991 REXO1Q8N1G1 1221 aaKnown RBP17.85■□□□□ 0.45
SNCA-205ENST00000394991 CEP89Q96ST8 783 aa17.85■□□□□ 0.45
SNCA-205ENST00000394991 RTP3Q9BQQ7 232 aa17.85■□□□□ 0.45
SNCA-205ENST00000394991 GCOM2Q9BZD3 368 aaPredicted RBP17.85■□□□□ 0.45
SNCA-205ENST00000394991 GBP3Q9H0R5 595 aa17.85■□□□□ 0.45
SNCA-205ENST00000394991 CHST12Q9NRB3 414 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms