RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 COBLL1Q53SF7 1204 aa7.65□□□□□ -1.18
RTN4-205ENST00000394609 SWSAP1Q6NVH7 229 aa7.65□□□□□ -1.18
RTN4-205ENST00000394609 MRPL14Q6P1L8 145 aaKnown RBP7.65□□□□□ -1.18
RTN4-205ENST00000394609 ARMCX5Q6P1M9 558 aa7.65□□□□□ -1.18
RTN4-205ENST00000394609 CYFIP1Q7L576 1253 aa7.65□□□□□ -1.18
RTN4-205ENST00000394609 KCTD17Q8N5Z5 321 aa7.65□□□□□ -1.18
RTN4-205ENST00000394609 MYCT1Q8N699 235 aa7.65□□□□□ -1.18
RTN4-205ENST00000394609 GPRC5AQ8NFJ5 357 aa7.65□□□□□ -1.18
RTN4-205ENST00000394609 SCFD1Q8WVM8 642 aa7.65□□□□□ -1.18
RTN4-205ENST00000394609 CDHR1Q96JP9 859 aa7.65□□□□□ -1.18
RTN4-205ENST00000394609 ZFP42Q96MM3 310 aa7.65□□□□□ -1.18
RTN4-205ENST00000394609 CTAGE1Q96RT6 745 aa7.65□□□□□ -1.18
RTN4-205ENST00000394609 PTPN18Q99952 460 aa7.65□□□□□ -1.18
RTN4-205ENST00000394609 THAP9Q9H5L6 903 aa7.65□□□□□ -1.18
RTN4-205ENST00000394609 MRPL44Q9H9J2 332 aaKnown RBP7.65□□□□□ -1.18
RTN4-205ENST00000394609 JPH1Q9HDC5 661 aaPredicted RBP7.65□□□□□ -1.18
RTN4-205ENST00000394609 MAGEC2Q9UBF1 373 aaPredicted RBP7.65□□□□□ -1.18
RTN4-205ENST00000394609 GABBR1Q9UBS5 961 aa7.65□□□□□ -1.18
RTN4-205ENST00000394609 PCDHA10Q9Y5I2 948 aa7.65□□□□□ -1.18
RTN4-205ENST00000394609 COL4A3BPQ9Y5P4 624 aa7.65□□□□□ -1.18
RTN4-205ENST00000394609 SPTLC1O15269 473 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 STAM2O75886 525 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 PRPF6O94906 941 aaKnown RBP7.64□□□□□ -1.19
RTN4-205ENST00000394609 FAM13AO94988 1023 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 MYBP10242 640 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 SKILP12757 684 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 MUTP22033 750 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 SFNP31947 248 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 GMPRP36959 345 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 RARRES1P49788 294 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 NPEPPSP55786 919 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 ACTR2P61160 394 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 PSMC5P62195 406 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 SPAG1Q07617 926 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 PRPF38BQ5VTL8 546 aaKnown RBP7.64□□□□□ -1.19
RTN4-205ENST00000394609 PLA2G4FQ68DD2 849 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 SPECC1LQ69YQ0 1117 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 ZNF746Q6NUN9 644 aaPredicted RBP7.64□□□□□ -1.19
RTN4-205ENST00000394609 TXLNBQ8N3L3 684 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 ZSCAN1Q8NBB4 408 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 ANKRD20A12PQ8NF67 263 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 NEK9Q8TD19 979 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 MAF1Q9H063 256 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 MROH8Q9H579 483 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 SLC9A2Q9UBY0 812 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 PTPRFP10586 1907 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 DNAJC25-GNG10A0A024R161 153 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 SOCS7O14512 581 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 BACH1O14867 736 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 NRDCO43847 1150 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 ZNF862O60290 1169 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 USO1O60763 962 aaKnown RBP7.64□□□□□ -1.19
RTN4-205ENST00000394609 HIP1RO75146 1068 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 GCNT3O95395 438 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 SFPQP23246 707 aaKnown RBP eCLIP7.64□□□□□ -1.19
RTN4-205ENST00000394609 EDNRBP24530 442 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 EEF1GP26641 437 aaKnown RBP7.64□□□□□ -1.19
RTN4-205ENST00000394609 NMT1P30419 496 aaKnown RBP7.64□□□□□ -1.19
RTN4-205ENST00000394609 HOXD13P35453 343 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 MTIF2P46199 727 aaKnown RBP7.64□□□□□ -1.19
RTN4-205ENST00000394609 ZNF157P51786 506 aaPredicted RBP7.64□□□□□ -1.19
RTN4-205ENST00000394609 WDR4P57081 412 aaKnown RBP7.64□□□□□ -1.19
RTN4-205ENST00000394609 UBXN1Q04323 297 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 KCNA1Q09470 495 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 LY6KQ17RY6 165 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 ZC2HC1CQ53FD0 456 aaPredicted RBP7.64□□□□□ -1.19
RTN4-205ENST00000394609 ODR4Q5SWX8 454 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 ANKRD23Q86SG2 305 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 KSR1Q8IVT5 923 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 CCDC60Q8IWA6 550 aaPredicted RBP7.64□□□□□ -1.19
RTN4-205ENST00000394609 C4orf19Q8IY42 314 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 NOC3LQ8WTT2 800 aaKnown RBP7.64□□□□□ -1.19
RTN4-205ENST00000394609 CPLX3Q8WVH0 158 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 CNOT6LQ96LI5 555 aaKnown RBP7.64□□□□□ -1.19
RTN4-205ENST00000394609 FGD4Q96M96 766 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 CCDC43Q96MW1 224 aaKnown RBP7.64□□□□□ -1.19
RTN4-205ENST00000394609 TUBGCP2Q9BSJ2 902 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 IKZF4Q9H2S9 585 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 PARVGQ9HBI0 331 aa7.64□□□□□ -1.19
RTN4-205ENST00000394609 ARGLU1Q9NWB6 273 aaPredicted RBP7.64□□□□□ -1.19
RTN4-205ENST00000394609 B4DLN1 442 aa7.63□□□□□ -1.19
RTN4-205ENST00000394609 NFASCO94856 1347 aa7.63□□□□□ -1.19
RTN4-205ENST00000394609 LYPLA2O95372 231 aa7.63□□□□□ -1.19
RTN4-205ENST00000394609 PSAPP07602 524 aa7.63□□□□□ -1.19
RTN4-205ENST00000394609 ZBTB48P10074 688 aaPredicted RBP7.63□□□□□ -1.19
RTN4-205ENST00000394609 TIMP2P16035 220 aa7.63□□□□□ -1.19
RTN4-205ENST00000394609 UBA1P22314 1058 aaKnown RBP7.63□□□□□ -1.19
RTN4-205ENST00000394609 ICAM3P32942 547 aa7.63□□□□□ -1.19
RTN4-205ENST00000394609 COPB2P35606 906 aa7.63□□□□□ -1.19
RTN4-205ENST00000394609 ADKP55263 362 aaKnown RBP7.63□□□□□ -1.19
RTN4-205ENST00000394609 CCZ1BP86790 482 aa7.63□□□□□ -1.19
RTN4-205ENST00000394609 CCZ1P86791 482 aaPredicted RBP7.63□□□□□ -1.19
RTN4-205ENST00000394609 LRRC63Q05C16 580 aa7.63□□□□□ -1.19
RTN4-205ENST00000394609 GPS2Q13227 327 aa7.63□□□□□ -1.19
RTN4-205ENST00000394609 ZCWPW2Q504Y3 356 aa7.63□□□□□ -1.19
RTN4-205ENST00000394609 XKR9Q5GH70 373 aa7.63□□□□□ -1.19
RTN4-205ENST00000394609 TMEM63BQ5T3F8 832 aa7.63□□□□□ -1.19
RTN4-205ENST00000394609 FBXO38Q6PIJ6 1188 aa7.63□□□□□ -1.19
RTN4-205ENST00000394609 ABHD15Q6UXT9 468 aa7.63□□□□□ -1.19
RTN4-205ENST00000394609 LRRC55Q6ZSA7 311 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms