RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 ZNF804AQ7Z570 1209 aa23.52■■□□□ 1.36
CLDND1-202ENST00000394180 SYCE1Q8N0S2 351 aa23.52■■□□□ 1.36
CLDND1-202ENST00000394180 TRIM9Q9C026 710 aa23.52■■□□□ 1.36
CLDND1-202ENST00000394180 PDP2Q9P2J9 529 aa23.52■■□□□ 1.36
CLDND1-202ENST00000394180 MCM7P33993 719 aa23.52■■□□□ 1.36
CLDND1-202ENST00000394180 SFSWAPQ12872 951 aaKnown RBP23.52■■□□□ 1.36
CLDND1-202ENST00000394180 PABPC1LQ4VXU2 614 aaKnown RBP23.52■■□□□ 1.36
CLDND1-202ENST00000394180 DUPD1Q68J44 220 aa23.52■■□□□ 1.36
CLDND1-202ENST00000394180 ATP8B4Q8TF62 1192 aa23.52■■□□□ 1.36
CLDND1-202ENST00000394180 DDX47Q9H0S4 455 aaKnown RBP23.52■■□□□ 1.36
CLDND1-202ENST00000394180 CD209Q9NNX6 404 aa23.52■■□□□ 1.36
CLDND1-202ENST00000394180 ATXN10Q9UBB4 475 aa23.52■■□□□ 1.36
CLDND1-202ENST00000394180 ATP8A1Q9Y2Q0 1164 aa23.52■■□□□ 1.36
CLDND1-202ENST00000394180 DLEC1Q9Y238 1755 aa23.52■■□□□ 1.36
CLDND1-202ENST00000394180 DDAH1O94760 285 aa23.51■■□□□ 1.35
CLDND1-202ENST00000394180 ANKRD23Q86SG2 305 aa23.51■■□□□ 1.35
CLDND1-202ENST00000394180 CMTR1Q8N1G2 835 aaKnown RBP23.51■■□□□ 1.35
CLDND1-202ENST00000394180 LRP2BPQ9P2M1 347 aa23.51■■□□□ 1.35
CLDND1-202ENST00000394180 BZW2Q9Y6E2 419 aaKnown RBP23.51■■□□□ 1.35
CLDND1-202ENST00000394180 V9GY48 417 aaPredicted RBP23.51■■□□□ 1.35
CLDND1-202ENST00000394180 ECE2O60344 883 aa23.51■■□□□ 1.35
CLDND1-202ENST00000394180 TGFB2P61812 414 aa23.51■■□□□ 1.35
CLDND1-202ENST00000394180 DHX34Q14147 1143 aaKnown RBP23.51■■□□□ 1.35
CLDND1-202ENST00000394180 ZRSR2Q15696 482 aaKnown RBP23.51■■□□□ 1.35
CLDND1-202ENST00000394180 LCA5Q86VQ0 697 aa23.51■■□□□ 1.35
CLDND1-202ENST00000394180 FITM2Q8N6M3 262 aa23.51■■□□□ 1.35
CLDND1-202ENST00000394180 TBC1D5Q92609 795 aa23.51■■□□□ 1.35
CLDND1-202ENST00000394180 SEMA6BQ9H3T3 888 aa23.51■■□□□ 1.35
CLDND1-202ENST00000394180 PCMTD2Q9NV79 361 aa23.51■■□□□ 1.35
CLDND1-202ENST00000394180 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.51■■□□□ 1.35
CLDND1-202ENST00000394180 KLHL14Q9P2G3 628 aa23.51■■□□□ 1.35
CLDND1-202ENST00000394180 PARP2Q9UGN5 583 aa23.51■■□□□ 1.35
CLDND1-202ENST00000394180 AMACRQ9UHK6 382 aa23.51■■□□□ 1.35
CLDND1-202ENST00000394180 TLR2O60603 784 aa23.5■■□□□ 1.35
CLDND1-202ENST00000394180 ATP5DP30049 168 aa23.5■■□□□ 1.35
CLDND1-202ENST00000394180 GUF1Q8N442 669 aaKnown RBP23.5■■□□□ 1.35
CLDND1-202ENST00000394180 KIF2BQ8N4N8 673 aa23.5■■□□□ 1.35
CLDND1-202ENST00000394180 METTL13Q8N6R0 699 aa23.5■■□□□ 1.35
CLDND1-202ENST00000394180 MAGEB6Q8N7X4 407 aa23.5■■□□□ 1.35
CLDND1-202ENST00000394180 AZIN2Q96A70 460 aa23.5■■□□□ 1.35
CLDND1-202ENST00000394180 OPTNQ96CV9 577 aa23.5■■□□□ 1.35
CLDND1-202ENST00000394180 RPS6KC1Q96S38 1066 aa23.5■■□□□ 1.35
CLDND1-202ENST00000394180 PIDD1Q9HB75 910 aa23.5■■□□□ 1.35
CLDND1-202ENST00000394180 ANAPC4Q9UJX5 808 aa23.5■■□□□ 1.35
CLDND1-202ENST00000394180 PCDHGA4Q9Y5G9 962 aa23.5■■□□□ 1.35
CLDND1-202ENST00000394180 ATAD5Q96QE3 1844 aa23.5■■□□□ 1.35
CLDND1-202ENST00000394180 GSG1L2A8MUP6 293 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 TUBP50607 506 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 PTENP60484 403 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 OCRLQ01968 901 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 STK4Q13043 487 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 PIK3AP1Q6ZUJ8 805 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 CATIPQ7Z7H3 387 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 ZC3H12CQ9C0D7 883 aaKnown RBP23.49■■□□□ 1.35
CLDND1-202ENST00000394180 AZI2Q9H6S1 392 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 DCLRE1BQ9H816 532 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 INTUQ9ULD6 942 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 STXBP5LQ9Y2K9 1186 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 KIAA1551Q9HCM1 1747 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 DOCK2Q92608 1830 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 PVALEFA0A1B0GWK0 134 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 TTI1O43156 1089 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 DOK7Q18PE1 504 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 FAM83BQ5T0W9 1011 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 TMTC3Q6ZXV5 915 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 ESR2Q92731 530 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 PTPRN2Q92932 1015 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 ERP44Q9BS26 406 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 SH3GLB2Q9NR46 395 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 STOML1Q9UBI4 398 aa23.49■■□□□ 1.35
CLDND1-202ENST00000394180 NKX1-2Q9UD57 310 aaPredicted RBP23.49■■□□□ 1.35
CLDND1-202ENST00000394180 RASSF2P50749 326 aa23.48■■□□□ 1.35
CLDND1-202ENST00000394180 RNASE9P60153 205 aaKnown RBP23.48■■□□□ 1.35
CLDND1-202ENST00000394180 KLRC3Q07444 240 aa23.48■■□□□ 1.35
CLDND1-202ENST00000394180 GSTA3Q16772 222 aa23.48■■□□□ 1.35
CLDND1-202ENST00000394180 RUNDC3BQ96NL0 473 aa23.48■■□□□ 1.35
CLDND1-202ENST00000394180 NLRC4Q9NPP4 1024 aa23.48■■□□□ 1.35
CLDND1-202ENST00000394180 RIC8AQ9NPQ8 531 aa23.48■■□□□ 1.35
CLDND1-202ENST00000394180 PACSIN2Q9UNF0 486 aaPredicted RBP23.48■■□□□ 1.35
CLDND1-202ENST00000394180 TRAFD1O14545 582 aaPredicted RBP23.48■■□□□ 1.35
CLDND1-202ENST00000394180 SHBGP04278 402 aa23.48■■□□□ 1.35
CLDND1-202ENST00000394180 PCP11498 1178 aaKnown RBP23.48■■□□□ 1.35
CLDND1-202ENST00000394180 SKIP12755 728 aa23.48■■□□□ 1.35
CLDND1-202ENST00000394180 KCNV2Q8TDN2 545 aa23.48■■□□□ 1.35
CLDND1-202ENST00000394180 CKAP2Q8WWK9 683 aa23.48■■□□□ 1.35
CLDND1-202ENST00000394180 UTP4Q969X6 686 aaKnown RBP23.48■■□□□ 1.35
CLDND1-202ENST00000394180 ZNF333Q96JL9 665 aa23.48■■□□□ 1.35
CLDND1-202ENST00000394180 ETNK1Q9HBU6 452 aa23.48■■□□□ 1.35
CLDND1-202ENST00000394180 USP40Q9NVE5 1235 aa23.48■■□□□ 1.35
CLDND1-202ENST00000394180 DLGAP2Q9P1A6 1054 aa23.48■■□□□ 1.35
CLDND1-202ENST00000394180 PIM2Q9P1W9 311 aa23.48■■□□□ 1.35
CLDND1-202ENST00000394180 USP20Q9Y2K6 914 aa23.48■■□□□ 1.35
CLDND1-202ENST00000394180 SNED1Q8TER0 1413 aa23.47■■□□□ 1.35
CLDND1-202ENST00000394180 MAGEA13PA6NCF6 341 aa23.47■■□□□ 1.35
CLDND1-202ENST00000394180 HNRNPCL1O60812 293 aaKnown RBP23.47■■□□□ 1.35
CLDND1-202ENST00000394180 PRDX5P30044 214 aa23.47■■□□□ 1.35
CLDND1-202ENST00000394180 KCNMA1Q12791 1236 aa23.47■■□□□ 1.35
CLDND1-202ENST00000394180 LARSQ9P2J5 1176 aaKnown RBP23.47■■□□□ 1.35
CLDND1-202ENST00000394180 SLC4A4Q9Y6R1 1079 aa23.47■■□□□ 1.35
CLDND1-202ENST00000394180 TNKSO95271 1327 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms