RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 APEX2Q9UBZ4 518 aa10.83□□□□□ -0.68
COL17A1-203ENST00000393211 CNOT8Q9UFF9 292 aaKnown RBP10.83□□□□□ -0.68
COL17A1-203ENST00000393211 PCYOX1Q9UHG3 505 aa10.83□□□□□ -0.68
COL17A1-203ENST00000393211 AJAP1Q9UKB5 411 aaPredicted RBP10.83□□□□□ -0.68
COL17A1-203ENST00000393211 ODF2LQ9ULJ1 636 aa10.83□□□□□ -0.68
COL17A1-203ENST00000393211 FRMD4BQ9Y2L6 1034 aa10.83□□□□□ -0.68
COL17A1-203ENST00000393211 MEIS1O00470 390 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 P4HA2O15460 535 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 PHF2O75151 1096 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 AGTP01019 485 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 GSTA1P08263 222 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 MMP13P45452 471 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 ZNF131P52739 623 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 PMS2P54278 862 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 KLRC3Q07444 240 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 ADCY2Q08462 1091 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 MAPK7Q13164 816 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 XRCC4Q13426 336 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 ITIH4Q14624 930 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 DENND2CQ68D51 928 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 CDC42EP5Q6NZY7 148 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 C1orf186Q6ZWK4 172 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 AMIGO3Q86WK7 504 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 GLYCTKQ8IVS8 523 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 ANKS4BQ8N8V4 417 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 TEKT1Q969V4 418 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 SGSM3Q96HU1 749 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 HSD17B14Q9BPX1 270 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 RUSC1Q9BVN2 902 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 OSBPL7Q9BZF2 842 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 PARVGQ9HBI0 331 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 MTRF1LQ9UGC7 380 aaKnown RBP10.82□□□□□ -0.68
COL17A1-203ENST00000393211 PPP1R9AQ9ULJ8 1098 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 PCDHB13Q9Y5F0 798 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 ZMYM2Q9UBW7 1377 aa10.82□□□□□ -0.68
COL17A1-203ENST00000393211 LOXHD1Q8IVV2 1947 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 FAM86B1E9PN63 330 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 KIAA0391O15091 583 aaKnown RBP10.81□□□□□ -0.68
COL17A1-203ENST00000393211 CLIC2O15247 247 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 MTA2O94776 668 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 SERPINB2P05120 415 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 FAM86B2P0C5J1 330 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 BCRP11274 1271 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 EEF2P13639 858 aaKnown RBP10.81□□□□□ -0.68
COL17A1-203ENST00000393211 VCAM1P19320 739 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 TMOD1P28289 359 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 MAP2K2P36507 400 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 PPP2R5CQ13362 524 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 SLMAPQ14BN4 828 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 PREPLQ4J6C6 727 aaPredicted RBP10.81□□□□□ -0.68
COL17A1-203ENST00000393211 WLSQ5T9L3 541 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 DCAF12L1Q5VU92 463 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 SLC51AQ86UW1 340 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 JAMLQ86YT9 394 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 MYCT1Q8N699 235 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 CCDC197Q8NCU1 140 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 CCT6BQ92526 530 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 CELF4Q9BZC1 486 aaKnown RBP10.81□□□□□ -0.68
COL17A1-203ENST00000393211 GPR88Q9GZN0 384 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 INTS2Q9H0H0 1204 aaKnown RBP10.81□□□□□ -0.68
COL17A1-203ENST00000393211 TAOK3Q9H2K8 898 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 DPH5Q9H2P9 285 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 ATP8A1Q9Y2Q0 1164 aa10.81□□□□□ -0.68
COL17A1-203ENST00000393211 RSPH10B2B2RC85 870 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 RSPH10BP0C881 870 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 CTNNA2P26232 953 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 MYL7Q01449 175 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 CETN1Q12798 172 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 ALCAMQ13740 583 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 SNCBQ16143 134 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 CYP1B1Q16678 543 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 QPCTQ16769 361 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 CERKLQ49MI3 558 aaPredicted RBP10.8□□□□□ -0.68
COL17A1-203ENST00000393211 SYDE2Q5VT97 1194 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 TATDN1Q6P1N9 297 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 GJB7Q6PEY0 223 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 TMEM179Q6ZVK1 233 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 ZNF720Q7Z2F6 126 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 PARP9Q8IXQ6 854 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 FUKQ8N0W3 1084 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 ZNF317Q96PQ6 595 aaPredicted RBP10.8□□□□□ -0.68
COL17A1-203ENST00000393211 NACC1Q96RE7 527 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 AGPAT1Q99943 283 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 TRIM51Q9BSJ1 452 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 ROPN1BQ9BZX4 212 aaPredicted RBP10.8□□□□□ -0.68
COL17A1-203ENST00000393211 WNT8AQ9H1J5 351 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 EPB41L4BQ9H329 900 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 ROPN1Q9HAT0 212 aaPredicted RBP10.8□□□□□ -0.68
COL17A1-203ENST00000393211 POLD4Q9HCU8 107 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 OSGEPQ9NPF4 335 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 PI4KBQ9UBF8 816 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 THSD7AQ9UPZ6 1657 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 USP20Q9Y2K6 914 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 IGLV3-22A0A075B6J6 115 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 CCT8L1PA6NM43 557 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 UBAP1LF5GYI3 381 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 DNM1LO00429 736 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 PMM2O15305 246 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 CAND2O75155 1236 aa10.8□□□□□ -0.68
COL17A1-203ENST00000393211 MAPTP10636 758 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms