RNA–Protein interactions for RNA: ENST00000392169.6

SDHC-203, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-203ENST00000392169 ECHDC2Q86YB7 292 aa7.55□□□□□ -1.2
SDHC-203ENST00000392169 C4orf19Q8IY42 314 aa7.55□□□□□ -1.2
SDHC-203ENST00000392169 ABI1Q8IZP0 508 aa7.55□□□□□ -1.2
SDHC-203ENST00000392169 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.55□□□□□ -1.2
SDHC-203ENST00000392169 MICAL1Q8TDZ2 1067 aa7.55□□□□□ -1.2
SDHC-203ENST00000392169 POF1BQ8WVV4 589 aa7.55□□□□□ -1.2
SDHC-203ENST00000392169 TMEM143Q96AN5 459 aa7.55□□□□□ -1.2
SDHC-203ENST00000392169 PABPC5Q96DU9 382 aaKnown RBP7.55□□□□□ -1.2
SDHC-203ENST00000392169 ZSCAN31Q96LW9 406 aaPredicted RBP7.55□□□□□ -1.2
SDHC-203ENST00000392169 KIF2CQ99661 725 aa7.55□□□□□ -1.2
SDHC-203ENST00000392169 EIF2AK1Q9BQI3 630 aaKnown RBP7.55□□□□□ -1.2
SDHC-203ENST00000392169 LLPHQ9BRT6 129 aaKnown RBP7.55□□□□□ -1.2
SDHC-203ENST00000392169 INO80BQ9C086 356 aaPredicted RBP7.55□□□□□ -1.2
SDHC-203ENST00000392169 TMEM117Q9H0C3 514 aa7.55□□□□□ -1.2
SDHC-203ENST00000392169 ZSWIM4Q9H7M6 989 aa7.55□□□□□ -1.2
SDHC-203ENST00000392169 CHST12Q9NRB3 414 aa7.55□□□□□ -1.2
SDHC-203ENST00000392169 BMP2KQ9NSY1 1161 aaPredicted RBP7.55□□□□□ -1.2
SDHC-203ENST00000392169 CLDND1Q9NY35 253 aa7.55□□□□□ -1.2
SDHC-203ENST00000392169 DACT1Q9NYF0 836 aa7.55□□□□□ -1.2
SDHC-203ENST00000392169 HCSTQ9UBK5 93 aa7.55□□□□□ -1.2
SDHC-203ENST00000392169 FNDC1Q4ZHG4 1894 aaPredicted RBP7.54□□□□□ -1.2
SDHC-203ENST00000392169 FGF18O76093 207 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 EOMESO95936 686 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 GTF2F1P35269 517 aaKnown RBP eCLIP7.54□□□□□ -1.2
SDHC-203ENST00000392169 IRS1P35568 1242 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 RFC5P40937 340 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 HMGN5P82970 282 aaKnown RBP7.54□□□□□ -1.2
SDHC-203ENST00000392169 LAMTOR4Q0VGL1 99 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 GNL2Q13823 731 aaKnown RBP7.54□□□□□ -1.2
SDHC-203ENST00000392169 LONRF3Q496Y0 759 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 TWF2Q6IBS0 349 aaKnown RBP7.54□□□□□ -1.2
SDHC-203ENST00000392169 PTCRAQ6ISU1 281 aaPredicted RBP7.54□□□□□ -1.2
SDHC-203ENST00000392169 LRRC55Q6ZSA7 311 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 CATSPER4Q7RTX7 472 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 RBM23Q86U06 439 aaKnown RBP7.54□□□□□ -1.2
SDHC-203ENST00000392169 THNSL1Q8IYQ7 743 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 FAM184AQ8NB25 1140 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 COLGALT1Q8NBJ5 622 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 NEK9Q8TD19 979 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 PRPF31Q8WWY3 499 aaKnown RBP7.54□□□□□ -1.2
SDHC-203ENST00000392169 PSPC1Q8WXF1 523 aaKnown RBP7.54□□□□□ -1.2
SDHC-203ENST00000392169 PPP2R3CQ969Q6 453 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 CASD1Q96PB1 797 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 MTMR9Q96QG7 549 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 HSD17B14Q9BPX1 270 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 DHX33Q9H6R0 707 aaKnown RBP7.54□□□□□ -1.2
SDHC-203ENST00000392169 CWH43Q9H720 699 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 IFT122Q9HBG6 1241 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 SH2B1Q9NRF2 756 aaPredicted RBP7.54□□□□□ -1.2
SDHC-203ENST00000392169 RNF19AQ9NV58 838 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 PIN4Q9Y237 131 aaKnown RBP7.54□□□□□ -1.2
SDHC-203ENST00000392169 PPME1Q9Y570 386 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 COL4A3BPQ9Y5P4 624 aa7.54□□□□□ -1.2
SDHC-203ENST00000392169 KIAA1671Q9BY89 1806 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 A0A087WWV3 80 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 GRXCR2A6NFK2 248 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 POTEMA6NI47 508 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 LINC01565O15544 149 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 ASAP2O43150 1006 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 SKIP12755 728 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 IL9P15248 144 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 LAG3P18627 525 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 LTBRP36941 435 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 TECP42680 631 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 PHKA2P46019 1235 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 RBM25P49756 843 aaKnown RBP7.53□□□□□ -1.2
SDHC-203ENST00000392169 UBE3AQ05086 875 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 DLX2Q07687 328 aaPredicted RBP7.53□□□□□ -1.2
SDHC-203ENST00000392169 COL19A1Q14993 1142 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 EMC2Q15006 297 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 ZNF174Q15697 407 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 CLUL1Q15846 466 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 CSPP1Q1MSJ5 1256 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 CTC1Q2NKJ3 1217 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 PUS10Q3MIT2 529 aaKnown RBP7.53□□□□□ -1.2
SDHC-203ENST00000392169 CLLU1OSQ5K130 101 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 KCNT2Q6UVM3 1135 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 ZNF598Q86UK7 904 aaKnown RBP7.53□□□□□ -1.2
SDHC-203ENST00000392169 FERMT3Q86UX7 667 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 LRRC43Q8N309 656 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 RNF149Q8NC42 400 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 FBXO18Q8NFZ0 1043 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 HELQQ8TDG4 1101 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 PIGOQ8TEQ8 1089 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 TCP11Q8WWU5 503 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 LPPQ93052 612 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 CCDC43Q96MW1 224 aaKnown RBP7.53□□□□□ -1.2
SDHC-203ENST00000392169 MTRQ99707 1265 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 TMEM60Q9H2L4 133 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 FOXP1Q9H334 677 aaPredicted RBP7.53□□□□□ -1.2
SDHC-203ENST00000392169 TLR9Q9NR96 1032 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 ANKEF1Q9NU02 776 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 PUF60Q9UHX1 559 aaKnown RBP7.53□□□□□ -1.2
SDHC-203ENST00000392169 FAM50BQ9Y247 325 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 PCDHGC5Q9Y5F6 944 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 C5orf42Q9H799 3197 aa7.53□□□□□ -1.2
SDHC-203ENST00000392169 PER2O15055 1255 aa7.52□□□□□ -1.21
SDHC-203ENST00000392169 GAS2O43903 313 aaKnown RBP7.52□□□□□ -1.21
SDHC-203ENST00000392169 ST18O60284 1047 aa7.52□□□□□ -1.21
SDHC-203ENST00000392169 DGAT1O75907 488 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms