RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 MIER3Q7Z3K6 550 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 METTL13Q8N6R0 699 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 BCS1LQ9Y276 419 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 TMEM120BA0PK00 339 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 USP17L10C9JJH3 530 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 USP11P51784 963 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 RWDD2BP57060 319 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 YWHAGP61981 247 aaKnown RBP eCLIP15.3■□□□□ 0.04
RTF1-201ENST00000389629 FAM98CQ17RN3 349 aaKnown RBP15.3■□□□□ 0.04
RTF1-201ENST00000389629 BRINP3Q76B58 766 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 SYT2Q8N9I0 419 aaPredicted RBP15.3■□□□□ 0.04
RTF1-201ENST00000389629 SUPT20HQ8NEM7 779 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 ATP6V0A4Q9HBG4 840 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 SAYSD1Q9NPB0 183 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 TRPC6Q9Y210 931 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 C1orf167Q5SNV9 1468 aa15.3■□□□□ 0.04
RTF1-201ENST00000389629 RNASELQ05823 741 aaKnown RBP15.29■□□□□ 0.04
RTF1-201ENST00000389629 PDIA5Q14554 519 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 CASC4Q6P4E1 433 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 RNF207Q6ZRF8 634 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 CFAP57Q96MR6 1250 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 MED15Q96RN5 788 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 SGK1O00141 431 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 MYCLP12524 364 aaPredicted RBP15.29■□□□□ 0.04
RTF1-201ENST00000389629 RFFLQ8WZ73 363 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 FAM187AA6NFU0 413 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 ATP5HO75947 161 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 UBOX5O94941 541 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 FOSP01100 380 aaPredicted RBP15.29■□□□□ 0.04
RTF1-201ENST00000389629 TRIM49P0CI25 452 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 TRIM49CP0CI26 452 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 NQO1P15559 274 aaKnown RBP15.29■□□□□ 0.04
RTF1-201ENST00000389629 TNNI1P19237 187 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 PREPLQ4J6C6 727 aaPredicted RBP15.29■□□□□ 0.04
RTF1-201ENST00000389629 LGSNQ5TDP6 509 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 CENPPQ6IPU0 288 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 CPXCR1Q8N123 301 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 SPDYE1Q8NFV5 336 aaPredicted RBP15.29■□□□□ 0.04
RTF1-201ENST00000389629 ZNF507Q8TCN5 953 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 TTC7AQ9ULT0 858 aaPredicted RBP15.29■□□□□ 0.04
RTF1-201ENST00000389629 DIS3Q9Y2L1 958 aaKnown RBP15.29■□□□□ 0.04
RTF1-201ENST00000389629 TNS3Q68CZ2 1445 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 CACNA1FO60840 1977 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 TRPA1O75762 1119 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 GRB10Q13322 594 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 ORC2Q13416 577 aaPredicted RBP15.29■□□□□ 0.04
RTF1-201ENST00000389629 SBK1Q52WX2 424 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 KIAA0895Q8NCT3 520 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 MAD2L2Q9UI95 211 aa15.29■□□□□ 0.04
RTF1-201ENST00000389629 NOL3O60936 208 aaKnown RBP15.28■□□□□ 0.04
RTF1-201ENST00000389629 CHRNA3P32297 505 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 NSFP46459 744 aaKnown RBP15.28■□□□□ 0.04
RTF1-201ENST00000389629 DOK7Q18PE1 504 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 FAM102BQ5T8I3 360 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 ATP2B4P23634 1241 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 DBN1Q16643 649 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 SLC35G2Q8TBE7 412 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 TEKT1Q969V4 418 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 DHX36Q9H2U1 1008 aaKnown RBP15.28■□□□□ 0.04
RTF1-201ENST00000389629 ALG13Q9NP73 1137 aaKnown RBP15.28■□□□□ 0.04
RTF1-201ENST00000389629 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.28■□□□□ 0.04
RTF1-201ENST00000389629 KCNJ1P48048 391 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 COPS2P61201 443 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 BSPRYQ5W0U4 402 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 TTBK2Q6IQ55 1244 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 PAF1Q8N7H5 531 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 NEDD1Q8NHV4 660 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 PIP4K2CQ8TBX8 421 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 CALR3Q96L12 384 aaKnown RBP15.28■□□□□ 0.04
RTF1-201ENST00000389629 C8orf37Q96NL8 207 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.28■□□□□ 0.04
RTF1-201ENST00000389629 MIF4GDA9UHW6 222 aaKnown RBP15.28■□□□□ 0.04
RTF1-201ENST00000389629 CLEC10AQ8IUN9 316 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 CEP120Q8N960 986 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 TTC17Q96AE7 1141 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 MXD3Q9BW11 206 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 ARHGEF10LQ9HCE6 1279 aa15.28■□□□□ 0.04
RTF1-201ENST00000389629 CASQ2O14958 399 aaPredicted RBP15.27■□□□□ 0.04
RTF1-201ENST00000389629 ZBTB5O15062 677 aa15.27■□□□□ 0.04
RTF1-201ENST00000389629 FTLP02792 175 aaPredicted RBP15.27■□□□□ 0.04
RTF1-201ENST00000389629 INHBAP08476 426 aa15.27■□□□□ 0.04
RTF1-201ENST00000389629 MFAP3P55082 362 aa15.27■□□□□ 0.04
RTF1-201ENST00000389629 SMIM5Q71RC9 77 aa15.27■□□□□ 0.04
RTF1-201ENST00000389629 JAMLQ86YT9 394 aa15.27■□□□□ 0.04
RTF1-201ENST00000389629 SLC17A8Q8NDX2 589 aa15.27■□□□□ 0.04
RTF1-201ENST00000389629 TTC16Q8NEE8 873 aa15.27■□□□□ 0.04
RTF1-201ENST00000389629 NKX2-3Q8TAU0 364 aa15.27■□□□□ 0.04
RTF1-201ENST00000389629 HAUS1Q96CS2 278 aa15.27■□□□□ 0.04
RTF1-201ENST00000389629 ANGPTL2Q9UKU9 493 aa15.27■□□□□ 0.04
RTF1-201ENST00000389629 MAN1A1P33908 653 aa15.27■□□□□ 0.04
RTF1-201ENST00000389629 DYNLT1P63172 113 aa15.27■□□□□ 0.04
RTF1-201ENST00000389629 GRAMD1BQ3KR37 738 aa15.27■□□□□ 0.04
RTF1-201ENST00000389629 ADGRF4Q8IZF3 695 aa15.27■□□□□ 0.04
RTF1-201ENST00000389629 EPS8L3Q8TE67 593 aaKnown RBP15.27■□□□□ 0.04
RTF1-201ENST00000389629 LMNAP02545 664 aaKnown RBP15.27■□□□□ 0.03
RTF1-201ENST00000389629 MT-ND3P03897 115 aa15.27■□□□□ 0.03
RTF1-201ENST00000389629 CD19P15391 556 aa15.27■□□□□ 0.03
RTF1-201ENST00000389629 IL17AQ16552 155 aa15.27■□□□□ 0.03
RTF1-201ENST00000389629 BARGINQ6ZT62 677 aa15.27■□□□□ 0.03
RTF1-201ENST00000389629 FRMD5Q7Z6J6 570 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms