RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 CCNYQ8ND76 341 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 EDEM3Q9BZQ6 932 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 CCSER1Q9C0I3 900 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 NFKBIAP25963 317 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 ZSCAN26Q16670 478 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 C16orf86Q6ZW13 317 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 ADGRA1Q86SQ6 560 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 ERICH1Q86X53 443 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 CACNA2D3Q8IZS8 1091 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 THEM5Q8N1Q8 247 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 GPATCH11Q8N954 259 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 RASSF4Q9H2L5 321 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 MAD1L1Q9Y6D9 718 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 PDHBP11177 359 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 NMT1P30419 496 aaKnown RBP13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 COASYQ13057 564 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 KCNB1Q14721 858 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 TRIP13Q15645 432 aaPredicted RBP13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 SLC10A5Q5PT55 438 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 TOGARAM2Q6ZUX3 1019 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 TMEM143Q96AN5 459 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 PARD6BQ9BYG5 372 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 NGRNQ9NPE2 291 aaKnown RBP13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 STRIP2Q9ULQ0 834 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 PPP4CP60510 307 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 C2orf54Q08AI8 447 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 XRRA1Q6P2D8 792 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 DCLK2Q8N568 766 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 BEST2Q8NFU1 509 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 ABHD10Q9NUJ1 306 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 DNAJC17Q9NVM6 304 aaKnown RBP13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 ANAPC5Q9UJX4 755 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 TACC3Q9Y6A5 838 aa13.94□□□□□ -0.18
PTPRN2-203ENST00000389418 CCL15-CCL14A0A0B4J2E2 113 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 SGK1O00141 431 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 EPHB4P54760 987 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 CCL15Q16663 113 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 MRPL4Q9BYD3 311 aaKnown RBP13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 KLHL14Q9P2G3 628 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 GPR75-ASB3A0A0A6YYF3 556 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 CCDC151A5D8V7 595 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 F8W8V4 182 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 KRT1P04264 644 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 XPAP23025 273 aaPredicted RBP13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 NBPF12Q5TAG4 269 aaPredicted RBP13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 CCDC188H7C350 402 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 EYA4O95677 639 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 TSTA3Q13630 321 aaPredicted RBP13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 PLA2G4FQ68DD2 849 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 PNMA8AQ86V59 439 aaPredicted RBP13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 SCN4BQ8IWT1 228 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 TRIM42Q8IWZ5 723 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 BCAS4Q8TDM0 211 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 GCNAQ96QF7 691 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 EIF2AK1Q9BQI3 630 aaKnown RBP13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 GCOM2Q9BZD3 368 aaPredicted RBP13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 KCND2Q9NZV8 630 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 UBR1Q8IWV7 1749 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 DDTLA6NHG4 134 aaPredicted RBP13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 MAFGO15525 162 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 CTDNEP1O95476 244 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 INHBAP08476 426 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 SLMAPQ14BN4 828 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 RPS6KA2Q15349 733 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 MAP3K21Q5TCX8 1036 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 DHX40Q8IX18 779 aaKnown RBP13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 RAET1EQ8TD07 263 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 MYO9BQ13459 2157 aa13.93□□□□□ -0.18
PTPRN2-203ENST00000389418 ZNF131P52739 623 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 PLTPP55058 493 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 ASPHQ12797 758 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 RNF149Q8NC42 400 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 VCPKMTQ9H867 229 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 SMIM22K7EJ46 135 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 KPNA2P52292 529 aaKnown RBP13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 YWHAGP61981 247 aaKnown RBP eCLIP13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 KCNH2Q12809 1159 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 RYBPQ8N488 228 aaPredicted RBP13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 FAM71BQ8TC56 605 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.92□□□□□ -0.182e-6■■■■■ 38.1
PTPRN2-203ENST00000389418 PHF20Q9BVI0 1012 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 VCXQ9H320 206 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 DNAJC12Q9UKB3 198 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 GOLGA8QA0A0J9YX86 632 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 TTC26A0AVF1 554 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 GOLGA8OA6NCC3 632 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 GOLGA8NF8WBI6 632 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 HUS1O60921 280 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 CALB1P05937 261 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 RWDD2BP57060 319 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 SMAD1Q15797 465 aaKnown RBP13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 RILPQ96NA2 401 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 CACYBPQ9HB71 228 aaKnown RBP13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 SLC9A2Q9UBY0 812 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 SLC8A2Q9UPR5 921 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 NR3C2P08235 984 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 SCP2P22307 547 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 DDR1Q08345 913 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 ZNF449Q6P9G9 518 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms