RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CLCN4P51793 760 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 PTH1RQ03431 593 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 HDAC1Q13547 482 aaPredicted RBP10.94□□□□□ -0.66
IFT88-203ENST00000389373 PTPN14Q15678 1187 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 VARS2Q5ST30 1063 aaKnown RBP10.94□□□□□ -0.66
IFT88-203ENST00000389373 POTEGQ6S5H5 508 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 CASC1Q6TDU7 716 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 PLA2G4DQ86XP0 818 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 NLRP7Q8WX94 980 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 BBXQ8WY36 941 aaPredicted RBP10.94□□□□□ -0.66
IFT88-203ENST00000389373 MAP3K14Q99558 947 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 ANO3Q9BYT9 981 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 FOXQ1Q9C009 403 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 LY9Q9HBG7 655 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 DACT1Q9NYF0 836 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 DNAJB4Q9UDY4 337 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 DCDC2BA2VCK2 349 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 MEIS1O00470 390 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 MAGEB2O15479 319 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 CNPP09543 421 aaKnown RBP10.93□□□□□ -0.66
IFT88-203ENST00000389373 SRFP11831 508 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 DARSP14868 501 aaKnown RBP10.93□□□□□ -0.66
IFT88-203ENST00000389373 SDHBP21912 280 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 SLC11A1P49279 550 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 NAPAP54920 295 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 NOMO2Q5JPE7 1267 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 KIAA0319Q5VV43 1072 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 DCLRE1AQ6PJP8 1040 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 C15orf39Q6ZRI6 1047 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 ZNF598Q86UK7 904 aaKnown RBP10.93□□□□□ -0.66
IFT88-203ENST00000389373 CHD1LQ86WJ1 897 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 SUMF1Q8NBK3 374 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 STAMQ92783 540 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 MYADMQ96S97 322 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 OSBPL3Q9H4L5 887 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 PIDD1Q9HB75 910 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 MAN1C1Q9NR34 630 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 ARHGEF3Q9NR81 526 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 SPATA6Q9NWH7 488 aaPredicted RBP10.93□□□□□ -0.66
IFT88-203ENST00000389373 GABBR1Q9UBS5 961 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 CDV3Q9UKY7 258 aaKnown RBP10.93□□□□□ -0.66
IFT88-203ENST00000389373 CEP131Q9UPN4 1083 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 SAMM50Q9Y512 469 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 VPS13AQ96RL7 3174 aa10.93□□□□□ -0.66
IFT88-203ENST00000389373 EVPLQ92817 2033 aa10.92□□□□□ -0.66
IFT88-203ENST00000389373 CLUHO75153 1309 aa10.92□□□□□ -0.66
IFT88-203ENST00000389373 INPPL1O15357 1258 aa10.92□□□□□ -0.66
IFT88-203ENST00000389373 LAMTOR5O43504 91 aa10.92□□□□□ -0.66
IFT88-203ENST00000389373 PSAPP07602 524 aa10.92□□□□□ -0.66
IFT88-203ENST00000389373 GPC3P51654 580 aa10.92□□□□□ -0.66
IFT88-203ENST00000389373 AK2P54819 239 aa10.92□□□□□ -0.66
IFT88-203ENST00000389373 CSTF1Q05048 431 aaKnown RBP10.92□□□□□ -0.66
IFT88-203ENST00000389373 TWF2Q6IBS0 349 aaKnown RBP10.92□□□□□ -0.66
IFT88-203ENST00000389373 PHLDB3Q6NSJ2 640 aa10.92□□□□□ -0.66
IFT88-203ENST00000389373 GLB1LQ6UWU2 654 aa10.92□□□□□ -0.66
IFT88-203ENST00000389373 MB21D2Q8IYB1 491 aaPredicted RBP10.92□□□□□ -0.66
IFT88-203ENST00000389373 SMG7Q92540 1137 aaKnown RBP10.92□□□□□ -0.66
IFT88-203ENST00000389373 SECISBP2LQ93073 1101 aaKnown RBP10.92□□□□□ -0.66
IFT88-203ENST00000389373 ZNF577Q9BSK1 485 aa10.92□□□□□ -0.66
IFT88-203ENST00000389373 VN1R3Q9BXE9 311 aa10.92□□□□□ -0.66
IFT88-203ENST00000389373 WDR6Q9NNW5 1121 aaKnown RBP10.92□□□□□ -0.66
IFT88-203ENST00000389373 MRPL17Q9NRX2 175 aaKnown RBP10.92□□□□□ -0.66
IFT88-203ENST00000389373 TBC1D13Q9NVG8 400 aa10.92□□□□□ -0.66
IFT88-203ENST00000389373 DLGAP2Q9P1A6 1054 aa10.92□□□□□ -0.66
IFT88-203ENST00000389373 USP18Q9UMW8 372 aa10.92□□□□□ -0.66
IFT88-203ENST00000389373 MAFBQ9Y5Q3 323 aaPredicted RBP10.92□□□□□ -0.66
IFT88-203ENST00000389373 CARNS1A5YM72 827 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 MEIS3P2A8K0S8 358 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 IPO5O00410 1097 aaKnown RBP10.91□□□□□ -0.66
IFT88-203ENST00000389373 DHX15O43143 795 aaKnown RBP10.91□□□□□ -0.66
IFT88-203ENST00000389373 PRC1O43663 620 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 RFPL2O75678 378 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 FOSP01100 380 aaPredicted RBP10.91□□□□□ -0.66
IFT88-203ENST00000389373 ALDH2P05091 517 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 SPATA31D3P0C874 917 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 GLULP15104 373 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 PHKA2P46019 1235 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 ADCY7P51828 1080 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 WWC2Q6AWC2 1192 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 SPATA31D4Q6ZUB0 917 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 GET4Q7L5D6 327 aaPredicted RBP10.91□□□□□ -0.66
IFT88-203ENST00000389373 ZNF280BQ86YH2 543 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 TMTC2Q8N394 836 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 PJA1Q8NG27 643 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 ATRIPQ8WXE1 791 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 NXPE3Q969Y0 559 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 FAM193BQ96PV7 902 aaPredicted RBP10.91□□□□□ -0.66
IFT88-203ENST00000389373 GCOM2Q9BZD3 368 aaPredicted RBP10.91□□□□□ -0.66
IFT88-203ENST00000389373 RIC8AQ9NPQ8 531 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 NRBP2Q9NSY0 501 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 EPS15L1Q9UBC2 864 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 FAN1Q9Y2M0 1017 aa10.91□□□□□ -0.66
IFT88-203ENST00000389373 SMCO2A6NFE2 343 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 FAM86B1E9PN63 330 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 OFD1O75665 1012 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 URODP06132 367 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 FAM86B2P0C5J1 330 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 CALM1P0DP23 149 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 CALM2P0DP24 149 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 CALM3P0DP25 149 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms